RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LARGE2Q8N3Y3 721 aa15.42■□□□□ 0.06
TPM4-212ENST00000590180 MPNDQ8N594 471 aa15.42■□□□□ 0.06
TPM4-212ENST00000590180 DNAAF4Q8WXU2 420 aa15.42■□□□□ 0.06
TPM4-212ENST00000590180 CCDC85AQ96PX6 553 aaPredicted RBP15.42■□□□□ 0.06
TPM4-212ENST00000590180 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
TPM4-212ENST00000590180 NEURL1BA8MQ27 555 aa15.41■□□□□ 0.06
TPM4-212ENST00000590180 SLFN5Q08AF3 891 aa15.41■□□□□ 0.06
TPM4-212ENST00000590180 DPP8Q6V1X1 898 aaPredicted RBP15.41■□□□□ 0.06
TPM4-212ENST00000590180 CELF1Q92879 486 aaKnown RBP15.41■□□□□ 0.06
TPM4-212ENST00000590180 RPS8P62241 208 aaKnown RBP15.4■□□□□ 0.06
TPM4-212ENST00000590180 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
TPM4-212ENST00000590180 TMC4Q7Z404 712 aa15.4■□□□□ 0.06
TPM4-212ENST00000590180 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
TPM4-212ENST00000590180 CDCA7LQ96GN5 454 aa15.4■□□□□ 0.06
TPM4-212ENST00000590180 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
TPM4-212ENST00000590180 ARFGEF2Q9Y6D5 1785 aa15.39■□□□□ 0.05
TPM4-212ENST00000590180 F6X3S4 739 aa15.39■□□□□ 0.05
TPM4-212ENST00000590180 PPIP5K2O43314 1243 aa15.39■□□□□ 0.05
TPM4-212ENST00000590180 EIF6P56537 245 aaKnown RBP15.39■□□□□ 0.05
TPM4-212ENST00000590180 RBM46Q8TBY0 533 aaKnown RBP15.39■□□□□ 0.05
TPM4-212ENST00000590180 NSFL1CQ9UNZ2 370 aaKnown RBP15.39■□□□□ 0.05
TPM4-212ENST00000590180 POTECB2RU33 542 aa15.38■□□□□ 0.05
TPM4-212ENST00000590180 H7C1W4 665 aa15.38■□□□□ 0.05
TPM4-212ENST00000590180 FZD9O00144 591 aa15.38■□□□□ 0.05
TPM4-212ENST00000590180 GCKRQ14397 625 aa15.38■□□□□ 0.05
TPM4-212ENST00000590180 UBE3BQ7Z3V4 1068 aa15.38■□□□□ 0.05
TPM4-212ENST00000590180 LINS1Q8NG48 757 aa15.38■□□□□ 0.05
TPM4-212ENST00000590180 CDHR2Q9BYE9 1310 aa15.38■□□□□ 0.05
TPM4-212ENST00000590180 AOC3Q16853 763 aa15.37■□□□□ 0.05
TPM4-212ENST00000590180 SLC4A10Q6U841 1118 aa15.37■□□□□ 0.05
TPM4-212ENST00000590180 NIM1KQ8IY84 436 aa15.37■□□□□ 0.05
TPM4-212ENST00000590180 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
TPM4-212ENST00000590180 GJA3Q9Y6H8 435 aa15.37■□□□□ 0.05
TPM4-212ENST00000590180 ZNF541Q9H0D2 1346 aa15.37■□□□□ 0.05
TPM4-212ENST00000590180 C6orf229H3BNL8 230 aa15.36■□□□□ 0.05
TPM4-212ENST00000590180 HSPA6P17066 643 aa15.36■□□□□ 0.05
TPM4-212ENST00000590180 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
TPM4-212ENST00000590180 CTSWP56202 376 aa15.35■□□□□ 0.05
TPM4-212ENST00000590180 GPSM2P81274 684 aa15.35■□□□□ 0.05
TPM4-212ENST00000590180 BEND3Q5T5X7 828 aa15.35■□□□□ 0.05
TPM4-212ENST00000590180 ANKRD18AQ8IVF6 992 aa15.35■□□□□ 0.05
TPM4-212ENST00000590180 MRPL50Q8N5N7 158 aaKnown RBP15.35■□□□□ 0.05
TPM4-212ENST00000590180 SMC1BQ8NDV3 1235 aa15.35■□□□□ 0.05
TPM4-212ENST00000590180 TTLL11Q8NHH1 800 aa15.35■□□□□ 0.05
TPM4-212ENST00000590180 DICER1Q9UPY3 1922 aaKnown RBP15.35■□□□□ 0.05
TPM4-212ENST00000590180 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
TPM4-212ENST00000590180 IQCA1LA6NCM1 817 aa15.34■□□□□ 0.05
TPM4-212ENST00000590180 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
TPM4-212ENST00000590180 FSTL1Q12841 308 aa15.34■□□□□ 0.05
TPM4-212ENST00000590180 GPC2Q8N158 579 aa15.34■□□□□ 0.05
TPM4-212ENST00000590180 CDC5LQ99459 802 aaKnown RBP15.34■□□□□ 0.05
TPM4-212ENST00000590180 ANKIB1Q9P2G1 1089 aa15.34■□□□□ 0.05
TPM4-212ENST00000590180 ZNRF3Q9ULT6 936 aa15.34■□□□□ 0.05
TPM4-212ENST00000590180 TAF1P21675 1872 aa15.33■□□□□ 0.05
TPM4-212ENST00000590180 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
TPM4-212ENST00000590180 WASHC4Q2M389 1173 aa15.33■□□□□ 0.04
TPM4-212ENST00000590180 TRMT2AQ8IZ69 625 aaKnown RBP15.33■□□□□ 0.04
TPM4-212ENST00000590180 SSH1Q8WYL5 1049 aa15.33■□□□□ 0.04
TPM4-212ENST00000590180 GREM2Q9H772 168 aa15.33■□□□□ 0.04
TPM4-212ENST00000590180 C9orf78Q9NZ63 289 aaPredicted RBP15.33■□□□□ 0.04
TPM4-212ENST00000590180 LAMB2P55268 1798 aa15.33■□□□□ 0.04
TPM4-212ENST00000590180 CACNA1FO60840 1977 aa15.33■□□□□ 0.04
TPM4-212ENST00000590180 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
TPM4-212ENST00000590180 L3MBTL3Q96JM7 780 aaPredicted RBP15.32■□□□□ 0.04
TPM4-212ENST00000590180 EYA3Q99504 573 aa15.32■□□□□ 0.04
TPM4-212ENST00000590180 BCL2L13Q9BXK5 485 aa15.32■□□□□ 0.04
TPM4-212ENST00000590180 SRCIN1Q9C0H9 1055 aa15.32■□□□□ 0.04
TPM4-212ENST00000590180 POLLQ9UGP5 575 aa15.32■□□□□ 0.04
TPM4-212ENST00000590180 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
TPM4-212ENST00000590180 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
TPM4-212ENST00000590180 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
TPM4-212ENST00000590180 G3V3G9 751 aa15.31■□□□□ 0.04
TPM4-212ENST00000590180 LMOD1P29536 600 aaPredicted RBP15.31■□□□□ 0.04
TPM4-212ENST00000590180 CASP7P55210 303 aa15.31■□□□□ 0.04
TPM4-212ENST00000590180 CXCL9Q07325 125 aa15.31■□□□□ 0.04
TPM4-212ENST00000590180 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
TPM4-212ENST00000590180 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
TPM4-212ENST00000590180 TBC1D16Q8TBP0 767 aa15.31■□□□□ 0.04
TPM4-212ENST00000590180 PLA2G12BQ9BX93 195 aa15.31■□□□□ 0.04
TPM4-212ENST00000590180 ZC3H12CQ9C0D7 883 aaKnown RBP15.31■□□□□ 0.04
TPM4-212ENST00000590180 TAF1DQ9H5J8 278 aaPredicted RBP15.31■□□□□ 0.04
TPM4-212ENST00000590180 ALDH1L1O75891 902 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 UFL1O94874 794 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 EPHX2P34913 555 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 IGHMBP2P38935 993 aaKnown RBP15.3■□□□□ 0.04
TPM4-212ENST00000590180 APLP1P51693 650 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
TPM4-212ENST00000590180 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 CHMP3Q9Y3E7 222 aa15.3■□□□□ 0.04
TPM4-212ENST00000590180 GRM8O00222 908 aa15.29■□□□□ 0.04
TPM4-212ENST00000590180 RAD17O75943 681 aa15.29■□□□□ 0.04
TPM4-212ENST00000590180 CSF1RP07333 972 aa15.29■□□□□ 0.04
TPM4-212ENST00000590180 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
TPM4-212ENST00000590180 POTEJP0CG39 1038 aa15.29■□□□□ 0.04
TPM4-212ENST00000590180 ITGA6P23229 1130 aa15.29■□□□□ 0.04
TPM4-212ENST00000590180 HNRNPUQ00839 825 aaKnown RBP eCLIP15.29■□□□□ 0.04
TPM4-212ENST00000590180 TNIP1Q15025 636 aa15.29■□□□□ 0.04
TPM4-212ENST00000590180 DOK7Q18PE1 504 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 323.6 ms