RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 GRM8O00222 908 aa11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 TRIM27P14373 513 aa11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 GPR162Q16538 588 aa11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 ZNF622Q969S3 477 aaKnown RBP eCLIP11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 BCS1LQ9Y276 419 aa11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 UTYO14607 1347 aa11.84□□□□□ -0.51
HMGN1P31-201ENST00000590085 PSME4Q14997 1843 aa11.83□□□□□ -0.51
HMGN1P31-201ENST00000590085 HSP90B1P14625 803 aaKnown RBP11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 CRAMP1Q96RY5 1269 aa11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 PLA2G12BQ9BX93 195 aa11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 TNNQ9UQP3 1299 aa11.83□□□□□ -0.52
HMGN1P31-201ENST00000590085 IPO8O15397 1037 aaKnown RBP11.82□□□□□ -0.52
HMGN1P31-201ENST00000590085 GRIN3BO60391 1043 aa11.82□□□□□ -0.52
HMGN1P31-201ENST00000590085 PDE8AO60658 829 aa11.82□□□□□ -0.52
HMGN1P31-201ENST00000590085 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
HMGN1P31-201ENST00000590085 CTSWP56202 376 aa11.82□□□□□ -0.52
HMGN1P31-201ENST00000590085 C7orf43Q8WVR3 580 aa11.82□□□□□ -0.52
HMGN1P31-201ENST00000590085 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
HMGN1P31-201ENST00000590085 ZNF646O15015 1829 aaPredicted RBP11.81□□□□□ -0.52
HMGN1P31-201ENST00000590085 ALDH1B1P30837 517 aa11.81□□□□□ -0.52
HMGN1P31-201ENST00000590085 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
HMGN1P31-201ENST00000590085 INTS3Q68E01 1043 aaKnown RBP11.81□□□□□ -0.52
HMGN1P31-201ENST00000590085 FRAT1Q92837 279 aaPredicted RBP11.81□□□□□ -0.52
HMGN1P31-201ENST00000590085 RBM17Q96I25 401 aaKnown RBP11.81□□□□□ -0.52
HMGN1P31-201ENST00000590085 NBPF7P0C2Y1 421 aaPredicted RBP11.8□□□□□ -0.52
HMGN1P31-201ENST00000590085 FOXO4P98177 505 aa11.8□□□□□ -0.52
HMGN1P31-201ENST00000590085 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
HMGN1P31-201ENST00000590085 SLC51AQ86UW1 340 aa11.8□□□□□ -0.52
HMGN1P31-201ENST00000590085 USP44Q9H0E7 712 aa11.8□□□□□ -0.52
HMGN1P31-201ENST00000590085 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
HMGN1P31-201ENST00000590085 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
HMGN1P31-201ENST00000590085 NFKBIEO00221 500 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 PPEF1O14829 653 aaPredicted RBP11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 C21orf2O43822 256 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 CSF1RP07333 972 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 GRAPQ13588 217 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 TTLL11Q8NHH1 800 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 KAZALD1Q96I82 304 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
HMGN1P31-201ENST00000590085 COL4A5P29400 1685 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 RLBP1P12271 317 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 OLFM4Q6UX06 510 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 CELF1Q92879 486 aaKnown RBP11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 CLUAP1Q96AJ1 413 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 GREM2Q9H772 168 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 SCN9AQ15858 1988 aa11.78□□□□□ -0.52
HMGN1P31-201ENST00000590085 BBOX1O75936 387 aa11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 RABL6Q3YEC7 729 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 CCDC93Q567U6 631 aa11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 TMC4Q7Z404 712 aa11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 TMEM57Q8N5G2 664 aa11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 MEIS3Q99687 375 aa11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 ATP6V0A2Q9Y487 856 aa11.77□□□□□ -0.53
HMGN1P31-201ENST00000590085 PRELPP51888 382 aa11.76□□□□□ -0.53
HMGN1P31-201ENST00000590085 RASSF7Q02833 373 aa11.76□□□□□ -0.53
HMGN1P31-201ENST00000590085 CC2D2BQ6DHV5 1058 aa11.76□□□□□ -0.53
HMGN1P31-201ENST00000590085 ARHGAP27Q6ZUM4 889 aa11.76□□□□□ -0.53
HMGN1P31-201ENST00000590085 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
HMGN1P31-201ENST00000590085 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
HMGN1P31-201ENST00000590085 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 ITGA6P23229 1130 aa11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 SP8Q8IXZ3 490 aa11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 PANK1Q8TE04 598 aa11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 CDC5LQ99459 802 aaKnown RBP11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
HMGN1P31-201ENST00000590085 PLIN1O60240 522 aa11.74□□□□□ -0.53
HMGN1P31-201ENST00000590085 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMGN1P31-201ENST00000590085 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
HMGN1P31-201ENST00000590085 RTKN2Q8IZC4 609 aa11.74□□□□□ -0.53
HMGN1P31-201ENST00000590085 PSMD1Q99460 953 aa11.74□□□□□ -0.53
HMGN1P31-201ENST00000590085 GNAI3P08754 354 aa11.73□□□□□ -0.53
HMGN1P31-201ENST00000590085 MS4A1P11836 297 aa11.73□□□□□ -0.53
HMGN1P31-201ENST00000590085 SCN4AP35499 1836 aa11.73□□□□□ -0.53
HMGN1P31-201ENST00000590085 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
HMGN1P31-201ENST00000590085 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
HMGN1P31-201ENST00000590085 WDR90Q96KV7 1748 aa11.73□□□□□ -0.53
HMGN1P31-201ENST00000590085 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
HMGN1P31-201ENST00000590085 ANKRD18BA2A2Z9 1011 aa11.72□□□□□ -0.53
HMGN1P31-201ENST00000590085 LMNB1P20700 586 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms