RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 PARP3Q9Y6F1 533 aa21.96■■□□□ 1.11
TMED1-205ENST00000589638 SURF6O75683 361 aaKnown RBP21.95■■□□□ 1.1
TMED1-205ENST00000589638 ST5P78524 1137 aa21.95■■□□□ 1.1
TMED1-205ENST00000589638 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
TMED1-205ENST00000589638 C3orf67Q6ZVT6 689 aa21.95■■□□□ 1.1
TMED1-205ENST00000589638 GREM2Q9H772 168 aa21.95■■□□□ 1.1
TMED1-205ENST00000589638 RFX5P48382 616 aaPredicted RBP21.94■■□□□ 1.1
TMED1-205ENST00000589638 CCDC57Q2TAC2 916 aa21.94■■□□□ 1.1
TMED1-205ENST00000589638 PSDA5PKW4 1024 aaPredicted RBP21.93■■□□□ 1.1
TMED1-205ENST00000589638 IFIT5Q13325 482 aaKnown RBP21.93■■□□□ 1.1
TMED1-205ENST00000589638 OS9Q13438 667 aaPredicted RBP21.93■■□□□ 1.1
TMED1-205ENST00000589638 CCDC152Q4G0S7 254 aa21.93■■□□□ 1.1
TMED1-205ENST00000589638 NLRP3Q96P20 1036 aa21.93■■□□□ 1.1
TMED1-205ENST00000589638 BCL11AQ9H165 835 aa21.93■■□□□ 1.1
TMED1-205ENST00000589638 SIL1Q9H173 461 aa21.93■■□□□ 1.1
TMED1-205ENST00000589638 PDZRN3Q9UPQ7 1066 aa21.93■■□□□ 1.1
TMED1-205ENST00000589638 ITGA6P23229 1130 aa21.92■■□□□ 1.1
TMED1-205ENST00000589638 PTPN12Q05209 780 aaKnown RBP21.92■■□□□ 1.1
TMED1-205ENST00000589638 TAF7LQ5H9L4 462 aa21.92■■□□□ 1.1
TMED1-205ENST00000589638 ANKRD45Q5TZF3 282 aa21.92■■□□□ 1.1
TMED1-205ENST00000589638 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
TMED1-205ENST00000589638 SLC16A10Q8TF71 515 aa21.92■■□□□ 1.1
TMED1-205ENST00000589638 ZNF594Q96JF6 807 aaPredicted RBP21.92■■□□□ 1.1
TMED1-205ENST00000589638 ANKRD18BA2A2Z9 1011 aa21.91■■□□□ 1.1
TMED1-205ENST00000589638 ZBTB7AO95365 584 aa21.91■■□□□ 1.1
TMED1-205ENST00000589638 DDX60Q8IY21 1712 aaKnown RBP21.91■■□□□ 1.1
TMED1-205ENST00000589638 G3BP1Q13283 466 aaKnown RBP eCLIP21.9■■□□□ 1.1
TMED1-205ENST00000589638 SF3B3Q15393 1217 aaKnown RBP21.9■■□□□ 1.1
TMED1-205ENST00000589638 COPRSQ9NQ92 184 aa21.9■■□□□ 1.1
TMED1-205ENST00000589638 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
TMED1-205ENST00000589638 LAMB2P55268 1798 aa21.89■■□□□ 1.1
TMED1-205ENST00000589638 SMARCA5O60264 1052 aaPredicted RBP21.89■■□□□ 1.09
TMED1-205ENST00000589638 HSP90AB4PQ58FF6 505 aa21.89■■□□□ 1.09
TMED1-205ENST00000589638 SEC31BQ9NQW1 1179 aa21.89■■□□□ 1.09
TMED1-205ENST00000589638 ZBTB47Q9UFB7 747 aaPredicted RBP21.89■■□□□ 1.09
TMED1-205ENST00000589638 RAB11FIP3O75154 756 aa21.88■■□□□ 1.09
TMED1-205ENST00000589638 NUCB1Q02818 461 aa21.88■■□□□ 1.09
TMED1-205ENST00000589638 LNPKQ9C0E8 428 aa21.88■■□□□ 1.09
TMED1-205ENST00000589638 CHD1LQ86WJ1 897 aa21.87■■□□□ 1.09
TMED1-205ENST00000589638 ATF5Q9Y2D1 282 aaPredicted RBP21.87■■□□□ 1.09
TMED1-205ENST00000589638 TNRC6CQ9HCJ0 1690 aaKnown RBP21.87■■□□□ 1.09
TMED1-205ENST00000589638 PUS3Q9BZE2 481 aaKnown RBP21.86■■□□□ 1.09
TMED1-205ENST00000589638 LRRCC1Q9C099 1032 aa21.86■■□□□ 1.09
TMED1-205ENST00000589638 RIC1Q4ADV7 1423 aa21.86■■□□□ 1.09
TMED1-205ENST00000589638 RTL9Q8NET4 1388 aa21.86■■□□□ 1.09
TMED1-205ENST00000589638 LRRC24Q50LG9 513 aa21.85■■□□□ 1.09
TMED1-205ENST00000589638 ERC1Q8IUD2 1116 aa21.85■■□□□ 1.09
TMED1-205ENST00000589638 RHPN1Q8TCX5 695 aa21.85■■□□□ 1.09
TMED1-205ENST00000589638 MTFR1LQ9H019 292 aa21.85■■□□□ 1.09
TMED1-205ENST00000589638 IL1RAPL2Q9NP60 686 aa21.85■■□□□ 1.09
TMED1-205ENST00000589638 EYA2O00167 538 aa21.84■■□□□ 1.09
TMED1-205ENST00000589638 RGS3P49796 1198 aa21.84■■□□□ 1.09
TMED1-205ENST00000589638 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
TMED1-205ENST00000589638 KIF1BPQ96EK5 621 aa21.84■■□□□ 1.09
TMED1-205ENST00000589638 CDC5LQ99459 802 aaKnown RBP21.84■■□□□ 1.09
TMED1-205ENST00000589638 BRIP1Q9BX63 1249 aa21.84■■□□□ 1.09
TMED1-205ENST00000589638 MYH3P11055 1940 aa21.84■■□□□ 1.09
TMED1-205ENST00000589638 CASZ1Q86V15 1759 aa21.84■■□□□ 1.09
TMED1-205ENST00000589638 SASH1O94885 1247 aa21.83■■□□□ 1.09
TMED1-205ENST00000589638 IGHMBP2P38935 993 aaKnown RBP21.83■■□□□ 1.09
TMED1-205ENST00000589638 LDHAL6AQ6ZMR3 332 aa21.83■■□□□ 1.09
TMED1-205ENST00000589638 DDX46Q7L014 1031 aaKnown RBP21.83■■□□□ 1.09
TMED1-205ENST00000589638 CNNM1Q9NRU3 951 aa21.83■■□□□ 1.09
TMED1-205ENST00000589638 NRXN2Q9P2S2 1712 aa21.83■■□□□ 1.08
TMED1-205ENST00000589638 PDE4AP27815 886 aa21.82■■□□□ 1.08
TMED1-205ENST00000589638 POLD1P28340 1107 aa21.82■■□□□ 1.08
TMED1-205ENST00000589638 IL15P40933 162 aaPredicted RBP21.82■■□□□ 1.08
TMED1-205ENST00000589638 ATG9AQ7Z3C6 839 aa21.82■■□□□ 1.08
TMED1-205ENST00000589638 ANKRD18AQ8IVF6 992 aa21.82■■□□□ 1.08
TMED1-205ENST00000589638 CELF1Q92879 486 aaKnown RBP21.82■■□□□ 1.08
TMED1-205ENST00000589638 MPHOSPH8Q99549 860 aa21.82■■□□□ 1.08
TMED1-205ENST00000589638 CIAO1O76071 339 aa21.81■■□□□ 1.08
TMED1-205ENST00000589638 TFCP2Q12800 502 aa21.81■■□□□ 1.08
TMED1-205ENST00000589638 C16orf71Q8IYS4 520 aaPredicted RBP21.81■■□□□ 1.08
TMED1-205ENST00000589638 PDE6BP35913 854 aa21.8■■□□□ 1.08
TMED1-205ENST00000589638 CRY2Q49AN0 593 aa21.8■■□□□ 1.08
TMED1-205ENST00000589638 RBM17Q96I25 401 aaKnown RBP21.8■■□□□ 1.08
TMED1-205ENST00000589638 FBXO3Q9UK99 471 aa21.8■■□□□ 1.08
TMED1-205ENST00000589638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.8■■□□□ 1.08
TMED1-205ENST00000589638 KLRG2A4D1S0 409 aaPredicted RBP21.79■■□□□ 1.08
TMED1-205ENST00000589638 METTL24Q5JXM2 366 aa21.79■■□□□ 1.08
TMED1-205ENST00000589638 COL4A1P02462 1669 aa21.79■■□□□ 1.08
TMED1-205ENST00000589638 RPS8P62241 208 aaKnown RBP21.78■■□□□ 1.08
TMED1-205ENST00000589638 GRAPQ13588 217 aa21.78■■□□□ 1.08
TMED1-205ENST00000589638 C2CD5Q86YS7 1000 aa21.78■■□□□ 1.08
TMED1-205ENST00000589638 CLASRPQ8N2M8 674 aaKnown RBP21.78■■□□□ 1.08
TMED1-205ENST00000589638 GRAPLQ8TC17 118 aaPredicted RBP21.78■■□□□ 1.08
TMED1-205ENST00000589638 OTUD7AQ8TE49 926 aaPredicted RBP21.78■■□□□ 1.08
TMED1-205ENST00000589638 RIPOR2Q9Y4F9 1068 aa21.78■■□□□ 1.08
TMED1-205ENST00000589638 LRP5O75197 1615 aa21.77■■□□□ 1.08
TMED1-205ENST00000589638 CEP126Q9P2H0 1117 aa21.77■■□□□ 1.08
TMED1-205ENST00000589638 C10orf71Q711Q0 1435 aa21.76■■□□□ 1.07
TMED1-205ENST00000589638 AACSQ86V21 672 aa21.76■■□□□ 1.07
TMED1-205ENST00000589638 ANKRD31Q8N7Z5 1873 aa21.75■■□□□ 1.07
TMED1-205ENST00000589638 SRGNP10124 158 aa21.75■■□□□ 1.07
TMED1-205ENST00000589638 NPR1P16066 1061 aa21.75■■□□□ 1.07
TMED1-205ENST00000589638 CHRNA5P30532 468 aa21.75■■□□□ 1.07
TMED1-205ENST00000589638 HOXA10P31260 410 aaPredicted RBP21.75■■□□□ 1.07
TMED1-205ENST00000589638 HELBQ8NG08 1087 aaPredicted RBP21.75■■□□□ 1.07
TMED1-205ENST00000589638 ZNF622Q969S3 477 aaKnown RBP eCLIP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 328.1 ms