RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 UPF1Q92900 1129 aaKnown RBP eCLIP4.05□□□□□ -1.76
LINC01539-203ENST00000589447 TSR2Q969E8 191 aaKnown RBP4.05□□□□□ -1.76
LINC01539-203ENST00000589447 KIF2CQ99661 725 aa4.05□□□□□ -1.76
LINC01539-203ENST00000589447 API5Q9BZZ5 524 aaKnown RBP4.05□□□□□ -1.76
LINC01539-203ENST00000589447 RBSNQ9H1K0 784 aa4.05□□□□□ -1.76
LINC01539-203ENST00000589447 TSPY26PQ9H489 355 aa4.05□□□□□ -1.76
LINC01539-203ENST00000589447 LMBRD1Q9NUN5 540 aa4.05□□□□□ -1.76
LINC01539-203ENST00000589447 TMA7Q9Y2S6 64 aaKnown RBP4.05□□□□□ -1.76
LINC01539-203ENST00000589447 SUGT1Q9Y2Z0 365 aa4.05□□□□□ -1.76
LINC01539-203ENST00000589447 RREB1Q92766 1687 aa4.05□□□□□ -1.76
LINC01539-203ENST00000589447 LRP5O75197 1615 aa4.05□□□□□ -1.76
LINC01539-203ENST00000589447 DCCP43146 1447 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 RGPD5Q99666 1765 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 MSH6P52701 1360 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 PNPLA6Q8IY17 1366 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 THSD7AQ9UPZ6 1657 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 ABCC4O15439 1325 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 ADGRF5Q8IZF2 1346 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 HMGB1P1B2RPK0 211 aaPredicted RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 U2SURPO15042 1029 aaKnown RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 TPD52L2O43399 206 aaKnown RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 EVI5O60447 810 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 LETM1O95202 739 aaPredicted RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 KIF20AO95235 890 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 PTPREP23469 700 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 GTF2F1P35269 517 aaKnown RBP eCLIP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 LMOD3Q0VAK6 560 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 PTGDRQ13258 359 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 NOM1Q5C9Z4 860 aaKnown RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 TTC22Q5TAA0 569 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 TEX2Q8IWB9 1127 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 ZNF454Q8N9F8 522 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 DDX17Q92841 729 aaKnown RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 BRINP2Q9C0B6 783 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 DIAPH3Q9NSV4 1193 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 FAM217BQ9NTX9 383 aaPredicted RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 PPP1R1BQ9UD71 204 aaPredicted RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 TBC1D2BQ9UPU7 963 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 SBF2Q86WG5 1849 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 CDK12Q9NYV4 1490 aaPredicted RBP4.04□□□□□ -1.76
LINC01539-203ENST00000589447 SSH2Q76I76 1423 aa4.04□□□□□ -1.76
LINC01539-203ENST00000589447 CACNA1FO60840 1977 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 ROBO2Q9HCK4 1378 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 JCADQ9P266 1359 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 NRKQ7Z2Y5 1582 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 TLDC2A0PJX2 215 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 SYCE3A1L190 88 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 GRXCR2A6NFK2 248 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 GOLGA6L6A8MZA4 724 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 MAFGO15525 162 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 HRO43593 1189 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 DIAPH1O60610 1272 aaKnown RBP4.03□□□□□ -1.76
LINC01539-203ENST00000589447 RAB11FIP3O75154 756 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 PRPF40AO75400 957 aaKnown RBP4.03□□□□□ -1.76
LINC01539-203ENST00000589447 CD2BP2O95400 341 aaKnown RBP4.03□□□□□ -1.76
LINC01539-203ENST00000589447 SOX11P35716 441 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 PRIM1P49642 420 aaKnown RBP4.03□□□□□ -1.76
LINC01539-203ENST00000589447 GNAI1P63096 354 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 HSP90AB4PQ58FF6 505 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 RBM46Q8TBY0 533 aaKnown RBP4.03□□□□□ -1.76
LINC01539-203ENST00000589447 PIBF1Q8WXW3 757 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 ZDHHC16Q969W1 377 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 ARMC5Q96C12 935 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 PLEKHF1Q96S99 279 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 KCNK17Q96T54 332 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 ALG2Q9H553 416 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 C14orf93Q9H972 538 aaKnown RBP4.03□□□□□ -1.76
LINC01539-203ENST00000589447 TERF2IPQ9NYB0 399 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 RGPD1P0DJD0 1748 aa4.03□□□□□ -1.76
LINC01539-203ENST00000589447 A0A1W2PP64 1363 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 MON2Q7Z3U7 1717 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 TCHHQ07283 1943 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 SOWAHDA6NJG2 315 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 PPP1R3GB7ZBB8 358 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 ERC2O15083 957 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 ZBTB7BO15156 539 aaPredicted RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 RECKO95980 971 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 LMOD1P29536 600 aaPredicted RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 MAP3K9P80192 1104 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 MDM2Q00987 491 aaPredicted RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 COL19A1Q14993 1142 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 ZNF662Q6ZS27 426 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 BRINP3Q76B58 766 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 HDGFL2Q7Z4V5 671 aaPredicted RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 RPAP2Q8IXW5 612 aaPredicted RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 MRPL50Q8N5N7 158 aaKnown RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 GPT2Q8TD30 523 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 ZNF526Q8TF50 670 aaPredicted RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 INTS4Q96HW7 963 aaKnown RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 USP26Q9BXU7 913 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 SLC12A5Q9H2X9 1139 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 IFT57Q9NWB7 429 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 TMEM63CQ9P1W3 806 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 RBM27Q9P2N5 1060 aaKnown RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 TRAK1Q9UPV9 953 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 KIF3AQ9Y496 699 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 NDUFB9Q9Y6M9 179 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 ATP7BP35670 1465 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 C1orf167Q5SNV9 1468 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms