RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 PTPRCP08575 1304 aa22.36■■□□□ 1.17
H3F3B-207ENST00000589417 CASP7P55210 303 aa22.36■■□□□ 1.17
H3F3B-207ENST00000589417 PLA2G12BQ9BX93 195 aa22.36■■□□□ 1.17
H3F3B-207ENST00000589417 DDX60Q8IY21 1712 aaKnown RBP22.36■■□□□ 1.17
H3F3B-207ENST00000589417 F6X3S4 739 aa22.35■■□□□ 1.17
H3F3B-207ENST00000589417 RTFDC1Q9BY42 306 aaPredicted RBP22.35■■□□□ 1.17
H3F3B-207ENST00000589417 VPS33BQ9H267 617 aa22.35■■□□□ 1.17
H3F3B-207ENST00000589417 HNRNPUQ00839 825 aaKnown RBP eCLIP22.34■■□□□ 1.17
H3F3B-207ENST00000589417 CCDC152Q4G0S7 254 aa22.34■■□□□ 1.17
H3F3B-207ENST00000589417 TMX4Q9H1E5 349 aaPredicted RBP22.34■■□□□ 1.17
H3F3B-207ENST00000589417 ALDH1L1O75891 902 aa22.33■■□□□ 1.17
H3F3B-207ENST00000589417 JARID2Q92833 1246 aaPredicted RBP22.33■■□□□ 1.17
H3F3B-207ENST00000589417 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.17
H3F3B-207ENST00000589417 LAMB2P55268 1798 aa22.33■■□□□ 1.16
H3F3B-207ENST00000589417 GLTPD2A6NH11 291 aa22.32■■□□□ 1.16
H3F3B-207ENST00000589417 RPS8P62241 208 aaKnown RBP22.32■■□□□ 1.16
H3F3B-207ENST00000589417 UBE3BQ7Z3V4 1068 aa22.32■■□□□ 1.16
H3F3B-207ENST00000589417 TTLL11Q8NHH1 800 aa22.32■■□□□ 1.16
H3F3B-207ENST00000589417 ZNF277Q9NRM2 450 aaPredicted RBP22.32■■□□□ 1.16
H3F3B-207ENST00000589417 RTL9Q8NET4 1388 aa22.32■■□□□ 1.16
H3F3B-207ENST00000589417 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
H3F3B-207ENST00000589417 IARSP41252 1262 aaKnown RBP22.31■■□□□ 1.16
H3F3B-207ENST00000589417 CTSWP56202 376 aa22.31■■□□□ 1.16
H3F3B-207ENST00000589417 KIF3CO14782 793 aa22.3■■□□□ 1.16
H3F3B-207ENST00000589417 CSF1RP07333 972 aa22.3■■□□□ 1.16
H3F3B-207ENST00000589417 ZNF526Q8TF50 670 aaPredicted RBP22.3■■□□□ 1.16
H3F3B-207ENST00000589417 ZBED9Q6R2W3 1325 aa22.3■■□□□ 1.16
H3F3B-207ENST00000589417 CACNA1SQ13698 1873 aa22.29■■□□□ 1.16
H3F3B-207ENST00000589417 RARSP54136 660 aaKnown RBP22.29■■□□□ 1.16
H3F3B-207ENST00000589417 DPY19L2Q6NUT2 758 aa22.29■■□□□ 1.16
H3F3B-207ENST00000589417 SLC51AQ86UW1 340 aa22.29■■□□□ 1.16
H3F3B-207ENST00000589417 MPNDQ8N594 471 aa22.29■■□□□ 1.16
H3F3B-207ENST00000589417 SUPT20HQ8NEM7 779 aa22.29■■□□□ 1.16
H3F3B-207ENST00000589417 SRCIN1Q9C0H9 1055 aa22.29■■□□□ 1.16
H3F3B-207ENST00000589417 SEC31BQ9NQW1 1179 aa22.29■■□□□ 1.16
H3F3B-207ENST00000589417 FZD9O00144 591 aa22.28■■□□□ 1.16
H3F3B-207ENST00000589417 SMC4Q9NTJ3 1288 aa22.28■■□□□ 1.16
H3F3B-207ENST00000589417 GRM8O00222 908 aa22.27■■□□□ 1.16
H3F3B-207ENST00000589417 DPP8Q6V1X1 898 aaPredicted RBP22.27■■□□□ 1.16
H3F3B-207ENST00000589417 UTYO14607 1347 aa22.27■■□□□ 1.16
H3F3B-207ENST00000589417 BCL2L13Q9BXK5 485 aa22.26■■□□□ 1.15
H3F3B-207ENST00000589417 NMRK2Q9NPI5 230 aa22.26■■□□□ 1.15
H3F3B-207ENST00000589417 PODXL2Q9NZ53 605 aa22.26■■□□□ 1.15
H3F3B-207ENST00000589417 DICER1Q9UPY3 1922 aaKnown RBP22.25■■□□□ 1.15
H3F3B-207ENST00000589417 SLC4A10Q6U841 1118 aa22.25■■□□□ 1.15
H3F3B-207ENST00000589417 JDP2Q8WYK2 163 aa22.25■■□□□ 1.15
H3F3B-207ENST00000589417 CDC5LQ99459 802 aaKnown RBP22.25■■□□□ 1.15
H3F3B-207ENST00000589417 GREM2Q9H772 168 aa22.25■■□□□ 1.15
H3F3B-207ENST00000589417 FOXO4P98177 505 aa22.24■■□□□ 1.15
H3F3B-207ENST00000589417 ANKRD18AQ8IVF6 992 aa22.24■■□□□ 1.15
H3F3B-207ENST00000589417 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
H3F3B-207ENST00000589417 COL4A1P02462 1669 aa22.23■■□□□ 1.15
H3F3B-207ENST00000589417 LRRC37AA6NMS7 1700 aa22.23■■□□□ 1.15
H3F3B-207ENST00000589417 C1QTNF8P60827 252 aa22.23■■□□□ 1.15
H3F3B-207ENST00000589417 KIAA2012Q0VF49 1180 aa22.23■■□□□ 1.15
H3F3B-207ENST00000589417 BSDC1Q9NW68 430 aaPredicted RBP22.23■■□□□ 1.15
H3F3B-207ENST00000589417 C9orf78Q9NZ63 289 aaPredicted RBP22.23■■□□□ 1.15
H3F3B-207ENST00000589417 LARGE2Q8N3Y3 721 aa22.22■■□□□ 1.15
H3F3B-207ENST00000589417 L3MBTL3Q96JM7 780 aaPredicted RBP22.22■■□□□ 1.15
H3F3B-207ENST00000589417 CCDC85AQ96PX6 553 aaPredicted RBP22.22■■□□□ 1.15
H3F3B-207ENST00000589417 RRAGCQ9HB90 399 aa22.22■■□□□ 1.15
H3F3B-207ENST00000589417 NOB1Q9ULX3 412 aaKnown RBP22.22■■□□□ 1.15
H3F3B-207ENST00000589417 NSFL1CQ9UNZ2 370 aaKnown RBP22.22■■□□□ 1.15
H3F3B-207ENST00000589417 CCDC88AQ3V6T2 1871 aa22.22■■□□□ 1.15
H3F3B-207ENST00000589417 TIAM2Q8IVF5 1701 aa22.21■■□□□ 1.15
H3F3B-207ENST00000589417 POTECB2RU33 542 aa22.21■■□□□ 1.15
H3F3B-207ENST00000589417 TOMM70O94826 608 aa22.21■■□□□ 1.15
H3F3B-207ENST00000589417 VEGFAP15692 232 aaPredicted RBP22.21■■□□□ 1.15
H3F3B-207ENST00000589417 GPSM2P81274 684 aa22.21■■□□□ 1.15
H3F3B-207ENST00000589417 API5Q9BZZ5 524 aaKnown RBP22.21■■□□□ 1.15
H3F3B-207ENST00000589417 PPIP5K2O43314 1243 aa22.2■■□□□ 1.14
H3F3B-207ENST00000589417 DDNO94850 711 aaPredicted RBP22.2■■□□□ 1.14
H3F3B-207ENST00000589417 POLLQ9UGP5 575 aa22.2■■□□□ 1.14
H3F3B-207ENST00000589417 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
H3F3B-207ENST00000589417 DUOX1Q9NRD9 1551 aa22.2■■□□□ 1.14
H3F3B-207ENST00000589417 COL4A5P29400 1685 aa22.2■■□□□ 1.14
H3F3B-207ENST00000589417 NBPF7P0C2Y1 421 aaPredicted RBP22.19■■□□□ 1.14
H3F3B-207ENST00000589417 ITGA6P23229 1130 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 AOC3Q16853 763 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 GPC2Q8N158 579 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 TBC1D16Q8TBP0 767 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 KAZALD1Q96I82 304 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 USP44Q9H0E7 712 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 TAF1P21675 1872 aa22.19■■□□□ 1.14
H3F3B-207ENST00000589417 ZNF541Q9H0D2 1346 aa22.18■■□□□ 1.14
H3F3B-207ENST00000589417 CCT4P50991 539 aaKnown RBP22.18■■□□□ 1.14
H3F3B-207ENST00000589417 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
H3F3B-207ENST00000589417 NIM1KQ8IY84 436 aa22.18■■□□□ 1.14
H3F3B-207ENST00000589417 ZNRF3Q9ULT6 936 aa22.18■■□□□ 1.14
H3F3B-207ENST00000589417 MINPP1Q9UNW1 487 aa22.18■■□□□ 1.14
H3F3B-207ENST00000589417 WDR90Q96KV7 1748 aa22.17■■□□□ 1.14
H3F3B-207ENST00000589417 XDHP47989 1333 aa22.17■■□□□ 1.14
H3F3B-207ENST00000589417 IGHMBP2P38935 993 aaKnown RBP22.17■■□□□ 1.14
H3F3B-207ENST00000589417 EIF6P56537 245 aaKnown RBP22.17■■□□□ 1.14
H3F3B-207ENST00000589417 WASHC4Q2M389 1173 aa22.17■■□□□ 1.14
H3F3B-207ENST00000589417 RABL6Q3YEC7 729 aaPredicted RBP22.17■■□□□ 1.14
H3F3B-207ENST00000589417 LMBR1LQ6UX01 489 aa22.17■■□□□ 1.14
H3F3B-207ENST00000589417 EYA3Q99504 573 aa22.17■■□□□ 1.14
H3F3B-207ENST00000589417 ANKRD18BA2A2Z9 1011 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms