RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 RPAP2Q8IXW5 612 aaPredicted RBP15.22■□□□□ 0.03
DNMT1-218ENST00000589294 ANKRD44Q8N8A2 993 aa15.22■□□□□ 0.03
DNMT1-218ENST00000589294 MASTLQ96GX5 879 aa15.22■□□□□ 0.03
DNMT1-218ENST00000589294 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
DNMT1-218ENST00000589294 RTL9Q8NET4 1388 aa15.22■□□□□ 0.03
DNMT1-218ENST00000589294 NEFLP07196 543 aa15.21■□□□□ 0.03
DNMT1-218ENST00000589294 ALDH1B1P30837 517 aa15.21■□□□□ 0.03
DNMT1-218ENST00000589294 ATP8B2P98198 1209 aa15.21■□□□□ 0.03
DNMT1-218ENST00000589294 DDX46Q7L014 1031 aaKnown RBP15.21■□□□□ 0.03
DNMT1-218ENST00000589294 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.03
DNMT1-218ENST00000589294 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
DNMT1-218ENST00000589294 CRAMP1Q96RY5 1269 aa15.21■□□□□ 0.03
DNMT1-218ENST00000589294 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
DNMT1-218ENST00000589294 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
DNMT1-218ENST00000589294 A0A0G2JLW4 131 aa15.19■□□□□ 0.02
DNMT1-218ENST00000589294 ANKRD18BA2A2Z9 1011 aa15.19■□□□□ 0.02
DNMT1-218ENST00000589294 BBOX1O75936 387 aa15.19■□□□□ 0.02
DNMT1-218ENST00000589294 DPEP1P16444 411 aa15.19■□□□□ 0.02
DNMT1-218ENST00000589294 KCNA3P22001 575 aa15.19■□□□□ 0.02
DNMT1-218ENST00000589294 IRX6P78412 446 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-218ENST00000589294 CNKSR1Q969H4 720 aa15.19■□□□□ 0.02
DNMT1-218ENST00000589294 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.02
DNMT1-218ENST00000589294 FHDC1Q9C0D6 1143 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-218ENST00000589294 GREM2Q9H772 168 aa15.19■□□□□ 0.02
DNMT1-218ENST00000589294 DDX60Q8IY21 1712 aaKnown RBP15.18■□□□□ 0.02
DNMT1-218ENST00000589294 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 KIF13BQ9NQT8 1826 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 SRGAP3O43295 1099 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 ITGA6P23229 1130 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 CHRNA5P30532 468 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 RPS8P62241 208 aaKnown RBP15.18■□□□□ 0.02
DNMT1-218ENST00000589294 CEP85Q6P2H3 762 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 KLHL34Q8N239 644 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 CDC5LQ99459 802 aaKnown RBP15.18■□□□□ 0.02
DNMT1-218ENST00000589294 SYT17Q9BSW7 474 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 C1orf115Q9H7X2 142 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 PIM2Q9P1W9 311 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
DNMT1-218ENST00000589294 ANKRD31Q8N7Z5 1873 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 GRAPQ13588 217 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 ERICH6BQ5W0A0 696 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 TTLL6Q8N841 843 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 GRAPLQ8TC17 118 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-218ENST00000589294 SSH3Q8TE77 659 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-218ENST00000589294 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
DNMT1-218ENST00000589294 LAMB2P55268 1798 aa15.16■□□□□ 0.02
DNMT1-218ENST00000589294 HMMRO75330 724 aa15.16■□□□□ 0.02
DNMT1-218ENST00000589294 ANKRD18AQ8IVF6 992 aa15.16■□□□□ 0.02
DNMT1-218ENST00000589294 LRP5O75197 1615 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 PNMA6EA0A0J9YXQ4 647 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 IGHMBP2P38935 993 aaKnown RBP15.15■□□□□ 0.02
DNMT1-218ENST00000589294 RFX5P48382 616 aaPredicted RBP15.15■□□□□ 0.02
DNMT1-218ENST00000589294 POLA2Q14181 598 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 TAF7LQ5H9L4 462 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 NLGN2Q8NFZ4 835 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 COPRSQ9NQ92 184 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 BSDC1Q9NW68 430 aaPredicted RBP15.15■□□□□ 0.02
DNMT1-218ENST00000589294 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 PCDHB15Q9Y5E8 787 aa15.15■□□□□ 0.02
DNMT1-218ENST00000589294 MYH3P11055 1940 aa15.14■□□□□ 0.01
DNMT1-218ENST00000589294 TNRC6CQ9HCJ0 1690 aaKnown RBP15.14■□□□□ 0.01
DNMT1-218ENST00000589294 PTPN12Q05209 780 aaKnown RBP15.14■□□□□ 0.01
DNMT1-218ENST00000589294 DALRD3Q5D0E6 543 aaKnown RBP15.14■□□□□ 0.01
DNMT1-218ENST00000589294 SIRT2Q8IXJ6 389 aa15.14■□□□□ 0.01
DNMT1-218ENST00000589294 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
DNMT1-218ENST00000589294 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
DNMT1-218ENST00000589294 GRIPAP1Q4V328 841 aa15.13■□□□□ 0.01
DNMT1-218ENST00000589294 CC2D2BQ6DHV5 1058 aa15.13■□□□□ 0.01
DNMT1-218ENST00000589294 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
DNMT1-218ENST00000589294 LDHAL6AQ6ZMR3 332 aa15.13■□□□□ 0.01
DNMT1-218ENST00000589294 SP8Q8IXZ3 490 aa15.13■□□□□ 0.01
DNMT1-218ENST00000589294 TMX4Q9H1E5 349 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-218ENST00000589294 CIAO1O76071 339 aa15.12■□□□□ 0.01
DNMT1-218ENST00000589294 HDAC1Q13547 482 aaPredicted RBP15.12■□□□□ 0.01
DNMT1-218ENST00000589294 C7orf43Q8WVR3 580 aa15.12■□□□□ 0.01
DNMT1-218ENST00000589294 ZNF594Q96JF6 807 aaPredicted RBP15.12■□□□□ 0.01
DNMT1-218ENST00000589294 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
DNMT1-218ENST00000589294 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
DNMT1-218ENST00000589294 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
DNMT1-218ENST00000589294 EYA2O00167 538 aa15.11■□□□□ 0.01
DNMT1-218ENST00000589294 PPEF1O14829 653 aaPredicted RBP15.11■□□□□ 0.01
DNMT1-218ENST00000589294 SOGA3Q5TF21 947 aa15.11■□□□□ 0.01
DNMT1-218ENST00000589294 CNNM1Q9NRU3 951 aa15.11■□□□□ 0.01
DNMT1-218ENST00000589294 RIPOR2Q9Y4F9 1068 aa15.11■□□□□ 0.01
DNMT1-218ENST00000589294 SURF6O75683 361 aaKnown RBP15.1■□□□□ 0.01
DNMT1-218ENST00000589294 IL15P40933 162 aaPredicted RBP15.1■□□□□ 0.01
DNMT1-218ENST00000589294 G3BP1Q13283 466 aaKnown RBP eCLIP15.1■□□□□ 0.01
DNMT1-218ENST00000589294 HSP90AB4PQ58FF6 505 aa15.1■□□□□ 0.01
DNMT1-218ENST00000589294 KLHDC4Q8TBB5 520 aa15.1■□□□□ 0.01
DNMT1-218ENST00000589294 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
DNMT1-218ENST00000589294 MINPP1Q9UNW1 487 aa15.1■□□□□ 0.01
DNMT1-218ENST00000589294 DCTPP1Q9H773 170 aa15.09■□□□□ 0.01
DNMT1-218ENST00000589294 PA2G4Q9UQ80 394 aaKnown RBP15.09■□□□□ 0.01
DNMT1-218ENST00000589294 BCS1LQ9Y276 419 aa15.09■□□□□ 0.01
DNMT1-218ENST00000589294 MROH5Q6ZUA9 1318 aa15.09■□□□□ 0.01
DNMT1-218ENST00000589294 COL11A2P13942 1736 aaPredicted RBP15.09■□□□□ 0.01
DNMT1-218ENST00000589294 KIAA1551Q9HCM1 1747 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms