RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 DDX60Q8IY21 1712 aaKnown RBP30.74■■■□□ 2.51
RFX1-205ENST00000589239 SURF6O75683 361 aaKnown RBP30.73■■■□□ 2.51
RFX1-205ENST00000589239 HSP90B1P14625 803 aaKnown RBP30.73■■■□□ 2.51
RFX1-205ENST00000589239 RFX5P48382 616 aaPredicted RBP30.73■■■□□ 2.51
RFX1-205ENST00000589239 PRR5LQ6MZQ0 368 aa30.73■■■□□ 2.51
RFX1-205ENST00000589239 MMP10P09238 476 aa30.72■■■□□ 2.51
RFX1-205ENST00000589239 SLC10A5Q5PT55 438 aa30.72■■■□□ 2.51
RFX1-205ENST00000589239 GREM2Q9H772 168 aa30.72■■■□□ 2.51
RFX1-205ENST00000589239 APBB1O00213 710 aa30.71■■■□□ 2.51
RFX1-205ENST00000589239 C3orf67Q6ZVT6 689 aa30.71■■■□□ 2.51
RFX1-205ENST00000589239 SKAP1Q86WV1 359 aa30.71■■■□□ 2.51
RFX1-205ENST00000589239 ERICH6Q7L0X2 663 aa30.71■■■□□ 2.51
RFX1-205ENST00000589239 MYH3P11055 1940 aa30.7■■■□□ 2.51
RFX1-205ENST00000589239 PTPN12Q05209 780 aaKnown RBP30.7■■■□□ 2.5
RFX1-205ENST00000589239 PDZRN3Q9UPQ7 1066 aa30.7■■■□□ 2.5
RFX1-205ENST00000589239 LAMB2P55268 1798 aa30.69■■■□□ 2.5
RFX1-205ENST00000589239 CCDC57Q2TAC2 916 aa30.69■■■□□ 2.5
RFX1-205ENST00000589239 ANKRD45Q5TZF3 282 aa30.68■■■□□ 2.5
RFX1-205ENST00000589239 SIL1Q9H173 461 aa30.68■■■□□ 2.5
RFX1-205ENST00000589239 R3HDM1Q15032 1099 aaKnown RBP30.68■■■□□ 2.5
RFX1-205ENST00000589239 COPRSQ9NQ92 184 aa30.68■■■□□ 2.5
RFX1-205ENST00000589239 NOP58Q9Y2X3 529 aaKnown RBP30.68■■■□□ 2.5
RFX1-205ENST00000589239 ITGA6P23229 1130 aa30.67■■■□□ 2.5
RFX1-205ENST00000589239 IFIT5Q13325 482 aaKnown RBP30.67■■■□□ 2.5
RFX1-205ENST00000589239 ZNF594Q96JF6 807 aaPredicted RBP30.67■■■□□ 2.5
RFX1-205ENST00000589239 PARP3Q9Y6F1 533 aa30.67■■■□□ 2.5
RFX1-205ENST00000589239 ST5P78524 1137 aa30.66■■■□□ 2.5
RFX1-205ENST00000589239 NUCB1Q02818 461 aa30.66■■■□□ 2.5
RFX1-205ENST00000589239 CCDC152Q4G0S7 254 aa30.66■■■□□ 2.5
RFX1-205ENST00000589239 NLRP3Q96P20 1036 aa30.66■■■□□ 2.5
RFX1-205ENST00000589239 SF3B3Q15393 1217 aaKnown RBP30.64■■■□□ 2.5
RFX1-205ENST00000589239 SLC16A10Q8TF71 515 aa30.64■■■□□ 2.5
RFX1-205ENST00000589239 LNPKQ9C0E8 428 aa30.64■■■□□ 2.5
RFX1-205ENST00000589239 OS9Q13438 667 aaPredicted RBP30.64■■■□□ 2.49
RFX1-205ENST00000589239 ANKRD18BA2A2Z9 1011 aa30.63■■■□□ 2.49
RFX1-205ENST00000589239 SMARCA5O60264 1052 aaPredicted RBP30.63■■■□□ 2.49
RFX1-205ENST00000589239 CHD1LQ86WJ1 897 aa30.63■■■□□ 2.49
RFX1-205ENST00000589239 SEC31BQ9NQW1 1179 aa30.63■■■□□ 2.49
RFX1-205ENST00000589239 TNRC6CQ9HCJ0 1690 aaKnown RBP30.62■■■□□ 2.49
RFX1-205ENST00000589239 G3BP1Q13283 466 aaKnown RBP eCLIP30.62■■■□□ 2.49
RFX1-205ENST00000589239 HSP90AB4PQ58FF6 505 aa30.62■■■□□ 2.49
RFX1-205ENST00000589239 TAF7LQ5H9L4 462 aa30.62■■■□□ 2.49
RFX1-205ENST00000589239 LRRCC1Q9C099 1032 aa30.61■■■□□ 2.49
RFX1-205ENST00000589239 PSDA5PKW4 1024 aaPredicted RBP30.61■■■□□ 2.49
RFX1-205ENST00000589239 RAB11FIP3O75154 756 aa30.61■■■□□ 2.49
RFX1-205ENST00000589239 ZBTB7AO95365 584 aa30.6■■■□□ 2.49
RFX1-205ENST00000589239 NRXN2Q9P2S2 1712 aa30.6■■■□□ 2.49
RFX1-205ENST00000589239 RTL9Q8NET4 1388 aa30.59■■■□□ 2.49
RFX1-205ENST00000589239 RHPN1Q8TCX5 695 aa30.59■■■□□ 2.49
RFX1-205ENST00000589239 PUS3Q9BZE2 481 aaKnown RBP30.59■■■□□ 2.49
RFX1-205ENST00000589239 RIC1Q4ADV7 1423 aa30.59■■■□□ 2.49
RFX1-205ENST00000589239 CASZ1Q86V15 1759 aa30.58■■■□□ 2.49
RFX1-205ENST00000589239 LRRC24Q50LG9 513 aa30.58■■■□□ 2.49
RFX1-205ENST00000589239 ZBTB47Q9UFB7 747 aaPredicted RBP30.58■■■□□ 2.49
RFX1-205ENST00000589239 SASH1O94885 1247 aa30.58■■■□□ 2.49
RFX1-205ENST00000589239 KIF1BPQ96EK5 621 aa30.58■■■□□ 2.49
RFX1-205ENST00000589239 IL1RAPL2Q9NP60 686 aa30.58■■■□□ 2.49
RFX1-205ENST00000589239 EYA2O00167 538 aa30.57■■■□□ 2.48
RFX1-205ENST00000589239 RGS3P49796 1198 aa30.57■■■□□ 2.48
RFX1-205ENST00000589239 PDE4AP27815 886 aa30.56■■■□□ 2.48
RFX1-205ENST00000589239 ATG9AQ7Z3C6 839 aa30.56■■■□□ 2.48
RFX1-205ENST00000589239 ERC1Q8IUD2 1116 aa30.56■■■□□ 2.48
RFX1-205ENST00000589239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.56■■■□□ 2.48
RFX1-205ENST00000589239 LDHAL6AQ6ZMR3 332 aa30.55■■■□□ 2.48
RFX1-205ENST00000589239 C16orf71Q8IYS4 520 aaPredicted RBP30.55■■■□□ 2.48
RFX1-205ENST00000589239 BRIP1Q9BX63 1249 aa30.55■■■□□ 2.48
RFX1-205ENST00000589239 COL4A1P02462 1669 aa30.54■■■□□ 2.48
RFX1-205ENST00000589239 CIAO1O76071 339 aa30.53■■■□□ 2.48
RFX1-205ENST00000589239 CRY2Q49AN0 593 aa30.53■■■□□ 2.48
RFX1-205ENST00000589239 MTFR1LQ9H019 292 aa30.53■■■□□ 2.48
RFX1-205ENST00000589239 ATF5Q9Y2D1 282 aaPredicted RBP30.53■■■□□ 2.48
RFX1-205ENST00000589239 IL15P40933 162 aaPredicted RBP30.53■■■□□ 2.48
RFX1-205ENST00000589239 CDC5LQ99459 802 aaKnown RBP30.53■■■□□ 2.48
RFX1-205ENST00000589239 CELF1Q92879 486 aaKnown RBP30.52■■■□□ 2.48
RFX1-205ENST00000589239 CNNM1Q9NRU3 951 aa30.52■■■□□ 2.48
RFX1-205ENST00000589239 TFCP2Q12800 502 aa30.52■■■□□ 2.48
RFX1-205ENST00000589239 DDX46Q7L014 1031 aaKnown RBP30.52■■■□□ 2.48
RFX1-205ENST00000589239 MPHOSPH8Q99549 860 aa30.52■■■□□ 2.48
RFX1-205ENST00000589239 FBXO3Q9UK99 471 aa30.52■■■□□ 2.48
RFX1-205ENST00000589239 ANKRD31Q8N7Z5 1873 aa30.51■■■□□ 2.47
RFX1-205ENST00000589239 KLRG2A4D1S0 409 aaPredicted RBP30.51■■■□□ 2.47
RFX1-205ENST00000589239 IGHMBP2P38935 993 aaKnown RBP30.51■■■□□ 2.47
RFX1-205ENST00000589239 OTUD7AQ8TE49 926 aaPredicted RBP30.51■■■□□ 2.47
RFX1-205ENST00000589239 TAF1P21675 1872 aa30.51■■■□□ 2.47
RFX1-205ENST00000589239 RPGRQ92834 1020 aaKnown RBP30.5■■■□□ 2.47
RFX1-205ENST00000589239 RIPOR2Q9Y4F9 1068 aa30.5■■■□□ 2.47
RFX1-205ENST00000589239 ANKRD18AQ8IVF6 992 aa30.49■■■□□ 2.47
RFX1-205ENST00000589239 LRP5O75197 1615 aa30.49■■■□□ 2.47
RFX1-205ENST00000589239 CLASRPQ8N2M8 674 aaKnown RBP30.48■■■□□ 2.47
RFX1-205ENST00000589239 PDE6BP35913 854 aa30.47■■■□□ 2.47
RFX1-205ENST00000589239 RPS8P62241 208 aaKnown RBP30.47■■■□□ 2.47
RFX1-205ENST00000589239 METTL24Q5JXM2 366 aa30.46■■■□□ 2.47
RFX1-205ENST00000589239 EAF2Q96CJ1 260 aaPredicted RBP30.46■■■□□ 2.47
RFX1-205ENST00000589239 SPEF2Q9C093 1822 aa30.45■■■□□ 2.46
RFX1-205ENST00000589239 POLD1P28340 1107 aa30.44■■■□□ 2.46
RFX1-205ENST00000589239 GRAPQ13588 217 aa30.44■■■□□ 2.46
RFX1-205ENST00000589239 GRAPLQ8TC17 118 aaPredicted RBP30.44■■■□□ 2.46
RFX1-205ENST00000589239 RBM17Q96I25 401 aaKnown RBP30.44■■■□□ 2.46
RFX1-205ENST00000589239 CEP126Q9P2H0 1117 aa30.44■■■□□ 2.46
RFX1-205ENST00000589239 SRGNP10124 158 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms