RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 TRIM6-TRIM34B2RNG4 842 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 HIP1O00291 1037 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
KDM4B-208ENST00000589104 KIAA1551Q9HCM1 1747 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 HMG20BQ9P0W2 317 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
KDM4B-208ENST00000589104 CPDO75976 1380 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 ATP5JP18859 108 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 MAP3K2Q9Y2U5 619 aa16.03■□□□□ 0.16
KDM4B-208ENST00000589104 RBM8AQ9Y5S9 174 aaKnown RBP16.03■□□□□ 0.16
KDM4B-208ENST00000589104 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.16
KDM4B-208ENST00000589104 GRM8O00222 908 aa16.02■□□□□ 0.16
KDM4B-208ENST00000589104 CPA1P15085 419 aa16.02■□□□□ 0.16
KDM4B-208ENST00000589104 DNM1Q05193 864 aaKnown RBP16.02■□□□□ 0.16
KDM4B-208ENST00000589104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.02■□□□□ 0.16
KDM4B-208ENST00000589104 PDRG1Q9NUG6 133 aa16.02■□□□□ 0.16
KDM4B-208ENST00000589104 ERBB3P21860 1342 aa16.02■□□□□ 0.16
KDM4B-208ENST00000589104 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.15
KDM4B-208ENST00000589104 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.15
KDM4B-208ENST00000589104 CDC37L1Q7L3B6 337 aa16.02■□□□□ 0.15
KDM4B-208ENST00000589104 ANP32BQ92688 251 aaKnown RBP16.02■□□□□ 0.15
KDM4B-208ENST00000589104 FAM227BQ96M60 508 aa16.02■□□□□ 0.15
KDM4B-208ENST00000589104 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.15
KDM4B-208ENST00000589104 PGBD1Q96JS3 809 aa16.02■□□□□ 0.15
KDM4B-208ENST00000589104 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.15
KDM4B-208ENST00000589104 ZNF589Q86UQ0 364 aaPredicted RBP16.01■□□□□ 0.15
KDM4B-208ENST00000589104 ABTB2Q8N961 1025 aa16.01■□□□□ 0.15
KDM4B-208ENST00000589104 BICC1Q9H694 974 aaKnown RBP16.01■□□□□ 0.15
KDM4B-208ENST00000589104 ROBO1Q9Y6N7 1651 aa16.01■□□□□ 0.15
KDM4B-208ENST00000589104 EPHA10Q5JZY3 1008 aa16.01■□□□□ 0.15
KDM4B-208ENST00000589104 CWC27Q6UX04 472 aaKnown RBP16.01■□□□□ 0.15
KDM4B-208ENST00000589104 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
KDM4B-208ENST00000589104 BTBD11A6QL63 1104 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 EXOSC10Q01780 885 aaKnown RBP16■□□□□ 0.15
KDM4B-208ENST00000589104 RUFY2Q8WXA3 655 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 GTF3C6Q969F1 213 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 ZNF831Q5JPB2 1677 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 HCLS1P14317 486 aaPredicted RBP16■□□□□ 0.15
KDM4B-208ENST00000589104 IQCB1Q15051 598 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
KDM4B-208ENST00000589104 SMAP1Q8IYB5 467 aaPredicted RBP16■□□□□ 0.15
KDM4B-208ENST00000589104 CLSTN2Q9H4D0 955 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 FOXP2O15409 715 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 ENGASEQ8NFI3 743 aa16■□□□□ 0.15
KDM4B-208ENST00000589104 MAP4K4O95819 1239 aaPredicted RBP15.99■□□□□ 0.15
KDM4B-208ENST00000589104 PTPN12Q05209 780 aaKnown RBP15.99■□□□□ 0.15
KDM4B-208ENST00000589104 PYCARDQ9ULZ3 195 aa15.99■□□□□ 0.15
KDM4B-208ENST00000589104 CTDNEP1O95476 244 aa15.99■□□□□ 0.15
KDM4B-208ENST00000589104 TPM3P06753 285 aa15.99■□□□□ 0.15
KDM4B-208ENST00000589104 SNW1Q13573 536 aaKnown RBP15.99■□□□□ 0.15
KDM4B-208ENST00000589104 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
KDM4B-208ENST00000589104 LIG1P18858 919 aa15.98■□□□□ 0.15
KDM4B-208ENST00000589104 RBM6P78332 1123 aaKnown RBP15.98■□□□□ 0.15
KDM4B-208ENST00000589104 GCKRQ14397 625 aa15.98■□□□□ 0.15
KDM4B-208ENST00000589104 UTP14CQ5TAP6 766 aaKnown RBP15.98■□□□□ 0.15
KDM4B-208ENST00000589104 PRPF40BQ6NWY9 871 aaKnown RBP15.98■□□□□ 0.15
KDM4B-208ENST00000589104 FAM200AQ8TCP9 573 aa15.98■□□□□ 0.15
KDM4B-208ENST00000589104 GPR108Q9NPR9 543 aa15.98■□□□□ 0.15
KDM4B-208ENST00000589104 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
KDM4B-208ENST00000589104 NUTM2FA1L443 756 aa15.98■□□□□ 0.15
KDM4B-208ENST00000589104 PLEKHO1Q53GL0 409 aaPredicted RBP15.98■□□□□ 0.15
KDM4B-208ENST00000589104 HAUS7Q99871 368 aa15.98■□□□□ 0.15
KDM4B-208ENST00000589104 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
KDM4B-208ENST00000589104 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
KDM4B-208ENST00000589104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.97■□□□□ 0.15
KDM4B-208ENST00000589104 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
KDM4B-208ENST00000589104 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
KDM4B-208ENST00000589104 CCDC94Q9BW85 323 aaPredicted RBP15.97■□□□□ 0.15
KDM4B-208ENST00000589104 NID2Q14112 1375 aa15.97■□□□□ 0.15
KDM4B-208ENST00000589104 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
KDM4B-208ENST00000589104 CCDC83Q8IWF9 413 aa15.97■□□□□ 0.15
KDM4B-208ENST00000589104 CLASRPQ8N2M8 674 aaKnown RBP15.97■□□□□ 0.15
KDM4B-208ENST00000589104 JAKMIP1Q96N16 626 aaKnown RBP15.97■□□□□ 0.15
KDM4B-208ENST00000589104 SLIT2O94813 1529 aa15.97■□□□□ 0.15
KDM4B-208ENST00000589104 ANKRD1Q15327 319 aa15.96■□□□□ 0.15
KDM4B-208ENST00000589104 RNF214Q8ND24 703 aa15.96■□□□□ 0.15
KDM4B-208ENST00000589104 DBNLQ9UJU6 430 aaKnown RBP15.96■□□□□ 0.15
KDM4B-208ENST00000589104 SMC3Q9UQE7 1217 aa15.96■□□□□ 0.15
KDM4B-208ENST00000589104 GCP02774 474 aa15.96■□□□□ 0.15
KDM4B-208ENST00000589104 STOX1Q6ZVD7 989 aa15.96■□□□□ 0.15
KDM4B-208ENST00000589104 LRRC59Q96AG4 307 aaKnown RBP15.96■□□□□ 0.15
KDM4B-208ENST00000589104 SLC52A2Q9HAB3 445 aa15.96■□□□□ 0.15
KDM4B-208ENST00000589104 FOXO4P98177 505 aa15.96■□□□□ 0.14
KDM4B-208ENST00000589104 NECTIN2Q92692 538 aa15.96■□□□□ 0.14
KDM4B-208ENST00000589104 NCLP19338 710 aaKnown RBP15.95■□□□□ 0.14
KDM4B-208ENST00000589104 BCL9LQ86UU0 1499 aa15.95■□□□□ 0.14
KDM4B-208ENST00000589104 PFKFB2O60825 505 aa15.95■□□□□ 0.14
KDM4B-208ENST00000589104 ZSCAN20P17040 1043 aaPredicted RBP15.95■□□□□ 0.14
KDM4B-208ENST00000589104 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
KDM4B-208ENST00000589104 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
KDM4B-208ENST00000589104 ATG9AQ7Z3C6 839 aa15.95■□□□□ 0.14
KDM4B-208ENST00000589104 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
KDM4B-208ENST00000589104 HDAC5Q9UQL6 1122 aa15.95■□□□□ 0.14
KDM4B-208ENST00000589104 IGSF3O75054 1194 aa15.94■□□□□ 0.14
KDM4B-208ENST00000589104 TYRO3Q06418 890 aa15.94■□□□□ 0.14
KDM4B-208ENST00000589104 NAA16Q6N069 864 aaPredicted RBP15.94■□□□□ 0.14
KDM4B-208ENST00000589104 NYAP1Q6ZVC0 841 aa15.94■□□□□ 0.14
KDM4B-208ENST00000589104 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
KDM4B-208ENST00000589104 CAVIN2O95810 425 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms