RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
APOC1-204ENST00000589078 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
APOC1-204ENST00000589078 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
APOC1-204ENST00000589078 SH3TC1Q8TE82 1336 aa12.33□□□□□ -0.44
APOC1-204ENST00000589078 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 NPR1P16066 1061 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 EPHX2P34913 555 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 DEFB115Q30KQ5 88 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 MAP1SQ66K74 1059 aaPredicted RBP12.32□□□□□ -0.44
APOC1-204ENST00000589078 TRMT2AQ8IZ69 625 aaKnown RBP12.32□□□□□ -0.44
APOC1-204ENST00000589078 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 MYD88Q99836 296 aa12.32□□□□□ -0.44
APOC1-204ENST00000589078 METTL22Q9BUU2 404 aaPredicted RBP12.32□□□□□ -0.44
APOC1-204ENST00000589078 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
APOC1-204ENST00000589078 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
APOC1-204ENST00000589078 KLRG2A4D1S0 409 aaPredicted RBP12.31□□□□□ -0.44
APOC1-204ENST00000589078 CCDC85CA6NKD9 419 aa12.31□□□□□ -0.44
APOC1-204ENST00000589078 MAP2K1Q02750 393 aaPredicted RBP12.31□□□□□ -0.44
APOC1-204ENST00000589078 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
APOC1-204ENST00000589078 MLLT1Q03111 559 aaPredicted RBP12.31□□□□□ -0.44
APOC1-204ENST00000589078 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
APOC1-204ENST00000589078 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
APOC1-204ENST00000589078 NLRP3Q96P20 1036 aa12.31□□□□□ -0.44
APOC1-204ENST00000589078 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
APOC1-204ENST00000589078 ABT1Q9ULW3 272 aaKnown RBP12.31□□□□□ -0.44
APOC1-204ENST00000589078 ZBED9Q6R2W3 1325 aa12.31□□□□□ -0.44
APOC1-204ENST00000589078 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
APOC1-204ENST00000589078 RIC1Q4ADV7 1423 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 ALDH1L2Q3SY69 923 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 OLFM4Q6UX06 510 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 G2E3Q7L622 706 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 C7orf43Q8WVR3 580 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
APOC1-204ENST00000589078 TRPM7Q96QT4 1865 aa12.29□□□□□ -0.44
APOC1-204ENST00000589078 PNMA8AQ86V59 439 aaPredicted RBP12.29□□□□□ -0.44
APOC1-204ENST00000589078 ZBTB38Q8NAP3 1195 aaPredicted RBP12.29□□□□□ -0.44
APOC1-204ENST00000589078 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
APOC1-204ENST00000589078 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
APOC1-204ENST00000589078 CRY2Q49AN0 593 aa12.28□□□□□ -0.44
APOC1-204ENST00000589078 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
APOC1-204ENST00000589078 TMX4Q9H1E5 349 aaPredicted RBP12.28□□□□□ -0.44
APOC1-204ENST00000589078 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
APOC1-204ENST00000589078 PTPRCP08575 1304 aa12.28□□□□□ -0.44
APOC1-204ENST00000589078 COL4A5P29400 1685 aa12.27□□□□□ -0.45
APOC1-204ENST00000589078 IRS4O14654 1257 aaPredicted RBP12.27□□□□□ -0.45
APOC1-204ENST00000589078 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.45
APOC1-204ENST00000589078 HCLS1P14317 486 aaPredicted RBP12.27□□□□□ -0.45
APOC1-204ENST00000589078 RGS19P49795 217 aa12.27□□□□□ -0.45
APOC1-204ENST00000589078 GRM1Q13255 1194 aa12.27□□□□□ -0.45
APOC1-204ENST00000589078 PAXIP1Q6ZW49 1069 aaPredicted RBP12.27□□□□□ -0.45
APOC1-204ENST00000589078 GPC2Q8N158 579 aa12.27□□□□□ -0.45
APOC1-204ENST00000589078 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
APOC1-204ENST00000589078 LINS1Q8NG48 757 aa12.27□□□□□ -0.45
APOC1-204ENST00000589078 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.45
APOC1-204ENST00000589078 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
APOC1-204ENST00000589078 NEURL1BA8MQ27 555 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 FZD9O00144 591 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 HOXA10P31260 410 aaPredicted RBP12.26□□□□□ -0.45
APOC1-204ENST00000589078 IARSP41252 1262 aaKnown RBP12.26□□□□□ -0.45
APOC1-204ENST00000589078 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.45
APOC1-204ENST00000589078 CYP4F22Q6NT55 531 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
APOC1-204ENST00000589078 RTKN2Q8IZC4 609 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 CRAMP1Q96RY5 1269 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 SNED1Q8TER0 1413 aa12.26□□□□□ -0.45
APOC1-204ENST00000589078 NUP98P52948 1817 aa12.25□□□□□ -0.45
APOC1-204ENST00000589078 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
APOC1-204ENST00000589078 RTL5Q5HYW3 569 aaPredicted RBP12.25□□□□□ -0.45
APOC1-204ENST00000589078 CC2D2BQ6DHV5 1058 aa12.25□□□□□ -0.45
APOC1-204ENST00000589078 SLC4A10Q6U841 1118 aa12.25□□□□□ -0.45
APOC1-204ENST00000589078 BCL2L13Q9BXK5 485 aa12.25□□□□□ -0.45
APOC1-204ENST00000589078 F6X3S4 739 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 ECE1P42892 770 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 GCKRQ14397 625 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
APOC1-204ENST00000589078 CCDC152Q4G0S7 254 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 SYNE4Q8N205 404 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
APOC1-204ENST00000589078 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
APOC1-204ENST00000589078 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 TRAF5O00463 557 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
APOC1-204ENST00000589078 PDE8AO60658 829 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 AOC2O75106 756 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 ALDH1L1O75891 902 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 BBOX1O75936 387 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
APOC1-204ENST00000589078 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
APOC1-204ENST00000589078 BRPF1P55201 1214 aaPredicted RBP12.23□□□□□ -0.45
APOC1-204ENST00000589078 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms