RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 NEXNQ0ZGT2 675 aa26.55■■□□□ 1.84
MBD3-205ENST00000589064 MPNDQ8N594 471 aa26.55■■□□□ 1.84
MBD3-205ENST00000589064 CELF1Q92879 486 aaKnown RBP26.55■■□□□ 1.84
MBD3-205ENST00000589064 HSP90B1P14625 803 aaKnown RBP26.55■■□□□ 1.84
MBD3-205ENST00000589064 FSTL1Q12841 308 aa26.55■■□□□ 1.84
MBD3-205ENST00000589064 DPP8Q6V1X1 898 aaPredicted RBP26.55■■□□□ 1.84
MBD3-205ENST00000589064 FKBP5Q13451 457 aaPredicted RBP26.54■■□□□ 1.84
MBD3-205ENST00000589064 CWF19L2Q2TBE0 894 aaKnown RBP26.54■■□□□ 1.84
MBD3-205ENST00000589064 TIAM2Q8IVF5 1701 aa26.53■■□□□ 1.84
MBD3-205ENST00000589064 CCER2I3L3R5 266 aa26.53■■□□□ 1.84
MBD3-205ENST00000589064 PDE8AO60658 829 aa26.53■■□□□ 1.84
MBD3-205ENST00000589064 SMC1BQ8NDV3 1235 aa26.53■■□□□ 1.84
MBD3-205ENST00000589064 NEURL1BA8MQ27 555 aa26.52■■□□□ 1.84
MBD3-205ENST00000589064 PPIP5K2O43314 1243 aa26.52■■□□□ 1.84
MBD3-205ENST00000589064 AOC3Q16853 763 aa26.52■■□□□ 1.84
MBD3-205ENST00000589064 TMC4Q7Z404 712 aa26.52■■□□□ 1.84
MBD3-205ENST00000589064 SUPT20HQ8NEM7 779 aa26.52■■□□□ 1.84
MBD3-205ENST00000589064 RTFDC1Q9BY42 306 aaPredicted RBP26.52■■□□□ 1.84
MBD3-205ENST00000589064 SEC31BQ9NQW1 1179 aa26.52■■□□□ 1.84
MBD3-205ENST00000589064 RPS8P62241 208 aaKnown RBP26.51■■□□□ 1.83
MBD3-205ENST00000589064 EIF6P56537 245 aaKnown RBP26.5■■□□□ 1.83
MBD3-205ENST00000589064 DNAAF4Q8WXU2 420 aa26.5■■□□□ 1.83
MBD3-205ENST00000589064 L3MBTL3Q96JM7 780 aaPredicted RBP26.5■■□□□ 1.83
MBD3-205ENST00000589064 CCDC85AQ96PX6 553 aaPredicted RBP26.5■■□□□ 1.83
MBD3-205ENST00000589064 VPS33BQ9H267 617 aa26.5■■□□□ 1.83
MBD3-205ENST00000589064 NIM1KQ8IY84 436 aa26.49■■□□□ 1.83
MBD3-205ENST00000589064 DICER1Q9UPY3 1922 aaKnown RBP26.49■■□□□ 1.83
MBD3-205ENST00000589064 CCDC152Q4G0S7 254 aa26.49■■□□□ 1.83
MBD3-205ENST00000589064 GJA3Q9Y6H8 435 aa26.49■■□□□ 1.83
MBD3-205ENST00000589064 CDHR2Q9BYE9 1310 aa26.48■■□□□ 1.83
MBD3-205ENST00000589064 IQCA1LA6NCM1 817 aa26.48■■□□□ 1.83
MBD3-205ENST00000589064 APLP1P51693 650 aa26.48■■□□□ 1.83
MBD3-205ENST00000589064 GPC2Q8N158 579 aa26.48■■□□□ 1.83
MBD3-205ENST00000589064 NSFL1CQ9UNZ2 370 aaKnown RBP26.48■■□□□ 1.83
MBD3-205ENST00000589064 COL4A5P29400 1685 aa26.47■■□□□ 1.83
MBD3-205ENST00000589064 H7C1W4 665 aa26.47■■□□□ 1.83
MBD3-205ENST00000589064 WDR90Q96KV7 1748 aa26.46■■□□□ 1.83
MBD3-205ENST00000589064 POTEIP0CG38 1075 aa26.46■■□□□ 1.83
MBD3-205ENST00000589064 POTEJP0CG39 1038 aa26.46■■□□□ 1.83
MBD3-205ENST00000589064 GCKRQ14397 625 aa26.46■■□□□ 1.83
MBD3-205ENST00000589064 TAF1DQ9H5J8 278 aaPredicted RBP26.46■■□□□ 1.83
MBD3-205ENST00000589064 LAMB2P55268 1798 aa26.46■■□□□ 1.83
MBD3-205ENST00000589064 E9PSI1 815 aa26.45■■□□□ 1.82
MBD3-205ENST00000589064 F6X3S4 739 aa26.45■■□□□ 1.82
MBD3-205ENST00000589064 GPSM2P81274 684 aa26.45■■□□□ 1.82
MBD3-205ENST00000589064 UBE3BQ7Z3V4 1068 aa26.45■■□□□ 1.82
MBD3-205ENST00000589064 DDX60Q8IY21 1712 aaKnown RBP26.45■■□□□ 1.82
MBD3-205ENST00000589064 LINS1Q8NG48 757 aa26.45■■□□□ 1.82
MBD3-205ENST00000589064 HACL1Q9UJ83 578 aa26.45■■□□□ 1.82
MBD3-205ENST00000589064 CTSWP56202 376 aa26.44■■□□□ 1.82
MBD3-205ENST00000589064 KIAA2012Q0VF49 1180 aa26.44■■□□□ 1.82
MBD3-205ENST00000589064 ZNRF3Q9ULT6 936 aa26.44■■□□□ 1.82
MBD3-205ENST00000589064 SLFN5Q08AF3 891 aa26.43■■□□□ 1.82
MBD3-205ENST00000589064 TTLL11Q8NHH1 800 aa26.43■■□□□ 1.82
MBD3-205ENST00000589064 CDCA7LQ96GN5 454 aa26.42■■□□□ 1.82
MBD3-205ENST00000589064 POLLQ9UGP5 575 aa26.42■■□□□ 1.82
MBD3-205ENST00000589064 C6orf229H3BNL8 230 aa26.42■■□□□ 1.82
MBD3-205ENST00000589064 EPHX2P34913 555 aa26.42■■□□□ 1.82
MBD3-205ENST00000589064 HTRA3P83110 453 aa26.42■■□□□ 1.82
MBD3-205ENST00000589064 CHADLQ6NUI6 762 aa26.42■■□□□ 1.82
MBD3-205ENST00000589064 CXCL9Q07325 125 aa26.41■■□□□ 1.82
MBD3-205ENST00000589064 WASHC4Q2M389 1173 aa26.41■■□□□ 1.82
MBD3-205ENST00000589064 EAPPQ56P03 285 aaPredicted RBP26.41■■□□□ 1.82
MBD3-205ENST00000589064 BEND3Q5T5X7 828 aa26.41■■□□□ 1.82
MBD3-205ENST00000589064 COL4A1P02462 1669 aa26.4■■□□□ 1.82
MBD3-205ENST00000589064 RIMBP2O15034 1052 aa26.4■■□□□ 1.82
MBD3-205ENST00000589064 ANKRD18AQ8IVF6 992 aa26.4■■□□□ 1.82
MBD3-205ENST00000589064 GREM2Q9H772 168 aa26.4■■□□□ 1.82
MBD3-205ENST00000589064 TAF1P21675 1872 aa26.4■■□□□ 1.82
MBD3-205ENST00000589064 CASP7P55210 303 aa26.39■■□□□ 1.82
MBD3-205ENST00000589064 TBC1D16Q8TBP0 767 aa26.38■■□□□ 1.81
MBD3-205ENST00000589064 GPR101Q96P66 508 aaPredicted RBP26.38■■□□□ 1.81
MBD3-205ENST00000589064 ANKIB1Q9P2G1 1089 aa26.38■■□□□ 1.81
MBD3-205ENST00000589064 RAD17O75943 681 aa26.37■■□□□ 1.81
MBD3-205ENST00000589064 EPS15P42566 896 aa26.37■■□□□ 1.81
MBD3-205ENST00000589064 DIEXFQ68CQ4 756 aaKnown RBP26.37■■□□□ 1.81
MBD3-205ENST00000589064 LDHDQ86WU2 507 aa26.37■■□□□ 1.81
MBD3-205ENST00000589064 CDC5LQ99459 802 aaKnown RBP26.37■■□□□ 1.81
MBD3-205ENST00000589064 PLA2G12BQ9BX93 195 aa26.37■■□□□ 1.81
MBD3-205ENST00000589064 CLEC11AQ9Y240 323 aa26.37■■□□□ 1.81
MBD3-205ENST00000589064 LMOD1P29536 600 aaPredicted RBP26.36■■□□□ 1.81
MBD3-205ENST00000589064 SCNN1DP51172 638 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 CIAPIN1Q6FI81 312 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 PNMA8AQ86V59 439 aaPredicted RBP26.36■■□□□ 1.81
MBD3-205ENST00000589064 MIER1Q8N108 512 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 MRPL50Q8N5N7 158 aaKnown RBP26.36■■□□□ 1.81
MBD3-205ENST00000589064 DNAJC5GQ8N7S2 189 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 PODXL2Q9NZ53 605 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 YDJCA8MPS7 323 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 SLC4A10Q6U841 1118 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 EYA3Q99504 573 aa26.36■■□□□ 1.81
MBD3-205ENST00000589064 CEP350Q5VT06 3117 aa26.35■■□□□ 1.81
MBD3-205ENST00000589064 DBNDD1Q9H9R9 158 aa26.35■■□□□ 1.81
MBD3-205ENST00000589064 UFL1O94874 794 aa26.34■■□□□ 1.81
MBD3-205ENST00000589064 CSF1RP07333 972 aa26.34■■□□□ 1.81
MBD3-205ENST00000589064 DOK7Q18PE1 504 aa26.34■■□□□ 1.81
MBD3-205ENST00000589064 TRMT2AQ8IZ69 625 aaKnown RBP26.34■■□□□ 1.81
MBD3-205ENST00000589064 GGA1Q9UJY5 639 aa26.34■■□□□ 1.81
MBD3-205ENST00000589064 DUOX1Q9NRD9 1551 aa26.33■■□□□ 1.81
MBD3-205ENST00000589064 TNIP1Q15025 636 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms