RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 HSP90B1P14625 803 aaKnown RBP25.08■■□□□ 1.61
DNMT1-216ENST00000588952 PDE6BP35913 854 aa25.08■■□□□ 1.61
DNMT1-216ENST00000588952 FAM161AQ3B820 660 aa25.08■■□□□ 1.61
DNMT1-216ENST00000588952 KLHL34Q8N239 644 aa25.08■■□□□ 1.61
DNMT1-216ENST00000588952 CHMP4BQ9H444 224 aaKnown RBP25.08■■□□□ 1.61
DNMT1-216ENST00000588952 PPP1R1BQ9UD71 204 aaPredicted RBP25.08■■□□□ 1.61
DNMT1-216ENST00000588952 CEP85Q6P2H3 762 aa25.07■■□□□ 1.6
DNMT1-216ENST00000588952 C2CD5Q86YS7 1000 aa25.07■■□□□ 1.6
DNMT1-216ENST00000588952 SRGNP10124 158 aa25.06■■□□□ 1.6
DNMT1-216ENST00000588952 SEC31BQ9NQW1 1179 aa25.06■■□□□ 1.6
DNMT1-216ENST00000588952 HDAC5Q9UQL6 1122 aa25.06■■□□□ 1.6
DNMT1-216ENST00000588952 PCDHB15Q9Y5E8 787 aa25.06■■□□□ 1.6
DNMT1-216ENST00000588952 CD2APQ9Y5K6 639 aa25.06■■□□□ 1.6
DNMT1-216ENST00000588952 DLEC1Q9Y238 1755 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 TAF1P21675 1872 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 PNMA6EA0A0J9YXQ4 647 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 DPEP1P16444 411 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 CCDC152Q4G0S7 254 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 SIRT2Q8IXJ6 389 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 CHMP3Q9Y3E7 222 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 RTL9Q8NET4 1388 aa25.05■■□□□ 1.6
DNMT1-216ENST00000588952 NEFLP07196 543 aa25.04■■□□□ 1.6
DNMT1-216ENST00000588952 KCNA3P22001 575 aa25.04■■□□□ 1.6
DNMT1-216ENST00000588952 MTX1Q13505 466 aa25.04■■□□□ 1.6
DNMT1-216ENST00000588952 NLGN2Q8NFZ4 835 aa25.04■■□□□ 1.6
DNMT1-216ENST00000588952 FHDC1Q9C0D6 1143 aaPredicted RBP25.04■■□□□ 1.6
DNMT1-216ENST00000588952 A0A0G2JLW4 131 aa25.03■■□□□ 1.6
DNMT1-216ENST00000588952 RFX5P48382 616 aaPredicted RBP25.03■■□□□ 1.6
DNMT1-216ENST00000588952 ATP8B2P98198 1209 aa25.03■■□□□ 1.6
DNMT1-216ENST00000588952 H0YIN7 160 aa25.02■■□□□ 1.6
DNMT1-216ENST00000588952 ITGA6P23229 1130 aa25.02■■□□□ 1.6
DNMT1-216ENST00000588952 HOXA10P31260 410 aaPredicted RBP25.02■■□□□ 1.6
DNMT1-216ENST00000588952 TGFB2P61812 414 aa25.02■■□□□ 1.6
DNMT1-216ENST00000588952 RPGRQ92834 1020 aaKnown RBP25.02■■□□□ 1.6
DNMT1-216ENST00000588952 SRGAP3O43295 1099 aa25.01■■□□□ 1.59
DNMT1-216ENST00000588952 NPR1P16066 1061 aa25.01■■□□□ 1.59
DNMT1-216ENST00000588952 SLC51AQ86UW1 340 aa25.01■■□□□ 1.59
DNMT1-216ENST00000588952 CELF1Q92879 486 aaKnown RBP25.01■■□□□ 1.59
DNMT1-216ENST00000588952 MASTLQ96GX5 879 aa25.01■■□□□ 1.59
DNMT1-216ENST00000588952 POLA2Q14181 598 aa25■■□□□ 1.59
DNMT1-216ENST00000588952 STYK1Q6J9G0 422 aa25■■□□□ 1.59
DNMT1-216ENST00000588952 DDX46Q7L014 1031 aaKnown RBP25■■□□□ 1.59
DNMT1-216ENST00000588952 KLHDC4Q8TBB5 520 aa25■■□□□ 1.59
DNMT1-216ENST00000588952 RBM17Q96I25 401 aaKnown RBP25■■□□□ 1.59
DNMT1-216ENST00000588952 ZNF594Q96JF6 807 aaPredicted RBP25■■□□□ 1.59
DNMT1-216ENST00000588952 IFIT5Q13325 482 aaKnown RBP24.99■■□□□ 1.59
DNMT1-216ENST00000588952 AAMPQ13685 434 aa24.99■■□□□ 1.59
DNMT1-216ENST00000588952 SRCAPQ6ZRS2 3230 aa24.99■■□□□ 1.59
DNMT1-216ENST00000588952 RPAP2Q8IXW5 612 aaPredicted RBP24.99■■□□□ 1.59
DNMT1-216ENST00000588952 SSH3Q8TE77 659 aa24.99■■□□□ 1.59
DNMT1-216ENST00000588952 ZNF622Q969S3 477 aaKnown RBP eCLIP24.99■■□□□ 1.594e-7■■■□□ 17.3
DNMT1-216ENST00000588952 SPEF2Q9C093 1822 aa24.99■■□□□ 1.59
DNMT1-216ENST00000588952 PDZRN3Q9UPQ7 1066 aa24.99■■□□□ 1.59
DNMT1-216ENST00000588952 BRCA1P38398 1863 aaKnown RBP24.98■■□□□ 1.59
DNMT1-216ENST00000588952 ANKRD18BA2A2Z9 1011 aa24.98■■□□□ 1.59
DNMT1-216ENST00000588952 CCDC57Q2TAC2 916 aa24.98■■□□□ 1.59
DNMT1-216ENST00000588952 CRAMP1Q96RY5 1269 aa24.98■■□□□ 1.59
DNMT1-216ENST00000588952 PA2G4Q9UQ80 394 aaKnown RBP24.98■■□□□ 1.59
DNMT1-216ENST00000588952 CACNA1SQ13698 1873 aa24.98■■□□□ 1.59
DNMT1-216ENST00000588952 PTPN12Q05209 780 aaKnown RBP24.97■■□□□ 1.59
DNMT1-216ENST00000588952 GRAPQ13588 217 aa24.97■■□□□ 1.59
DNMT1-216ENST00000588952 GRAPLQ8TC17 118 aaPredicted RBP24.97■■□□□ 1.59
DNMT1-216ENST00000588952 SYT17Q9BSW7 474 aa24.97■■□□□ 1.59
DNMT1-216ENST00000588952 WWC3Q9ULE0 1092 aa24.96■■□□□ 1.59
DNMT1-216ENST00000588952 SLX4Q8IY92 1834 aa24.96■■□□□ 1.59
DNMT1-216ENST00000588952 CDC5LQ99459 802 aaKnown RBP24.95■■□□□ 1.58
DNMT1-216ENST00000588952 RPS8P62241 208 aaKnown RBP24.94■■□□□ 1.58
DNMT1-216ENST00000588952 ANKRD18AQ8IVF6 992 aa24.94■■□□□ 1.58
DNMT1-216ENST00000588952 PUS3Q9BZE2 481 aaKnown RBP24.94■■□□□ 1.58
DNMT1-216ENST00000588952 PRPF40BQ6NWY9 871 aaKnown RBP24.93■■□□□ 1.58
DNMT1-216ENST00000588952 CNKSR1Q969H4 720 aa24.93■■□□□ 1.58
DNMT1-216ENST00000588952 COPRSQ9NQ92 184 aa24.93■■□□□ 1.58
DNMT1-216ENST00000588952 ALDH1B1P30837 517 aa24.92■■□□□ 1.58
DNMT1-216ENST00000588952 LRRC24Q50LG9 513 aa24.92■■□□□ 1.58
DNMT1-216ENST00000588952 TAF7LQ5H9L4 462 aa24.92■■□□□ 1.58
DNMT1-216ENST00000588952 SIL1Q9H173 461 aa24.92■■□□□ 1.58
DNMT1-216ENST00000588952 PPEF1O14829 653 aaPredicted RBP24.91■■□□□ 1.58
DNMT1-216ENST00000588952 IGHMBP2P38935 993 aaKnown RBP24.91■■□□□ 1.58
DNMT1-216ENST00000588952 OLFM4Q6UX06 510 aa24.91■■□□□ 1.58
DNMT1-216ENST00000588952 TTLL6Q8N841 843 aa24.91■■□□□ 1.58
DNMT1-216ENST00000588952 PIM2Q9P1W9 311 aa24.91■■□□□ 1.58
DNMT1-216ENST00000588952 LRRC37AA6NMS7 1700 aa24.91■■□□□ 1.58
DNMT1-216ENST00000588952 HMMRO75330 724 aa24.9■■□□□ 1.58
DNMT1-216ENST00000588952 IGHDP01880 384 aa24.9■■□□□ 1.58
DNMT1-216ENST00000588952 BBOX1O75936 387 aa24.89■■□□□ 1.58
DNMT1-216ENST00000588952 HDAC1Q13547 482 aaPredicted RBP24.89■■□□□ 1.58
DNMT1-216ENST00000588952 LDHAL6AQ6ZMR3 332 aa24.89■■□□□ 1.58
DNMT1-216ENST00000588952 ATG9AQ7Z3C6 839 aa24.89■■□□□ 1.58
DNMT1-216ENST00000588952 C7orf43Q8WVR3 580 aa24.89■■□□□ 1.58
DNMT1-216ENST00000588952 BSDC1Q9NW68 430 aaPredicted RBP24.89■■□□□ 1.58
DNMT1-216ENST00000588952 A0A1B0GUL6 1792 aa24.88■■□□□ 1.57
DNMT1-216ENST00000588952 EYA2O00167 538 aa24.88■■□□□ 1.57
DNMT1-216ENST00000588952 MPHOSPH8Q99549 860 aa24.88■■□□□ 1.57
DNMT1-216ENST00000588952 ZNF219Q9P2Y4 722 aaPredicted RBP24.88■■□□□ 1.57
DNMT1-216ENST00000588952 EXOC6BQ9Y2D4 811 aa24.88■■□□□ 1.57
DNMT1-216ENST00000588952 NOP58Q9Y2X3 529 aaKnown RBP24.88■■□□□ 1.57
DNMT1-216ENST00000588952 RIPOR2Q9Y4F9 1068 aa24.88■■□□□ 1.57
DNMT1-216ENST00000588952 SURF6O75683 361 aaKnown RBP24.87■■□□□ 1.57
DNMT1-216ENST00000588952 DALRD3Q5D0E6 543 aaKnown RBP24.87■■□□□ 1.57
DNMT1-216ENST00000588952 CNNM1Q9NRU3 951 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms