RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
NPC1-207ENST00000588867 OS9Q13438 667 aaPredicted RBP17.99■□□□□ 0.47
NPC1-207ENST00000588867 FAM161AQ3B820 660 aa17.99■□□□□ 0.47
NPC1-207ENST00000588867 SLC10A5Q5PT55 438 aa17.99■□□□□ 0.47
NPC1-207ENST00000588867 SIL1Q9H173 461 aa17.99■□□□□ 0.47
NPC1-207ENST00000588867 ZBTB47Q9UFB7 747 aaPredicted RBP17.99■□□□□ 0.47
NPC1-207ENST00000588867 MYH3P11055 1940 aa17.99■□□□□ 0.47
NPC1-207ENST00000588867 MMP10P09238 476 aa17.98■□□□□ 0.47
NPC1-207ENST00000588867 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
NPC1-207ENST00000588867 GREM2Q9H772 168 aa17.98■□□□□ 0.47
NPC1-207ENST00000588867 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
NPC1-207ENST00000588867 ABCC12Q96J65 1359 aa17.98■□□□□ 0.47
NPC1-207ENST00000588867 RFX5P48382 616 aaPredicted RBP17.98■□□□□ 0.47
NPC1-207ENST00000588867 PRR5LQ6MZQ0 368 aa17.98■□□□□ 0.47
NPC1-207ENST00000588867 PARP3Q9Y6F1 533 aa17.98■□□□□ 0.47
NPC1-207ENST00000588867 NUCB1Q02818 461 aa17.97■□□□□ 0.47
NPC1-207ENST00000588867 PTPN12Q05209 780 aaKnown RBP17.97■□□□□ 0.47
NPC1-207ENST00000588867 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.47
NPC1-207ENST00000588867 TAF7LQ5H9L4 462 aa17.97■□□□□ 0.47
NPC1-207ENST00000588867 ZNF594Q96JF6 807 aaPredicted RBP17.97■□□□□ 0.47
NPC1-207ENST00000588867 NLRP3Q96P20 1036 aa17.97■□□□□ 0.47
NPC1-207ENST00000588867 ITGA6P23229 1130 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 ST5P78524 1137 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 HSP90AB4PQ58FF6 505 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 CHD1LQ86WJ1 897 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 COPRSQ9NQ92 184 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 NOP58Q9Y2X3 529 aaKnown RBP17.96■□□□□ 0.47
NPC1-207ENST00000588867 ANKRD18BA2A2Z9 1011 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 SMARCA5O60264 1052 aaPredicted RBP17.96■□□□□ 0.47
NPC1-207ENST00000588867 C3orf67Q6ZVT6 689 aa17.96■□□□□ 0.47
NPC1-207ENST00000588867 RAB11FIP3O75154 756 aa17.95■□□□□ 0.46
NPC1-207ENST00000588867 R3HDM1Q15032 1099 aaKnown RBP17.95■□□□□ 0.46
NPC1-207ENST00000588867 LRRCC1Q9C099 1032 aa17.95■□□□□ 0.46
NPC1-207ENST00000588867 RGS3P49796 1198 aa17.94■□□□□ 0.46
NPC1-207ENST00000588867 LAMB2P55268 1798 aa17.94■□□□□ 0.46
NPC1-207ENST00000588867 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
NPC1-207ENST00000588867 SLC16A10Q8TF71 515 aa17.94■□□□□ 0.46
NPC1-207ENST00000588867 RHPN1Q8TCX5 695 aa17.93■□□□□ 0.46
NPC1-207ENST00000588867 SEC31BQ9NQW1 1179 aa17.93■□□□□ 0.46
NPC1-207ENST00000588867 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
NPC1-207ENST00000588867 IL1RAPL2Q9NP60 686 aa17.93■□□□□ 0.46
NPC1-207ENST00000588867 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
NPC1-207ENST00000588867 PUS3Q9BZE2 481 aaKnown RBP17.92■□□□□ 0.46
NPC1-207ENST00000588867 PSDA5PKW4 1024 aaPredicted RBP17.91■□□□□ 0.46
NPC1-207ENST00000588867 LRRC24Q50LG9 513 aa17.91■□□□□ 0.46
NPC1-207ENST00000588867 LDHAL6AQ6ZMR3 332 aa17.91■□□□□ 0.46
NPC1-207ENST00000588867 EYA2O00167 538 aa17.91■□□□□ 0.46
NPC1-207ENST00000588867 SASH1O94885 1247 aa17.91■□□□□ 0.46
NPC1-207ENST00000588867 ZBTB7AO95365 584 aa17.91■□□□□ 0.46
NPC1-207ENST00000588867 C16orf71Q8IYS4 520 aaPredicted RBP17.91■□□□□ 0.46
NPC1-207ENST00000588867 CASZ1Q86V15 1759 aa17.9■□□□□ 0.46
NPC1-207ENST00000588867 PDE4AP27815 886 aa17.9■□□□□ 0.46
NPC1-207ENST00000588867 CNNM1Q9NRU3 951 aa17.9■□□□□ 0.46
NPC1-207ENST00000588867 ATG9AQ7Z3C6 839 aa17.89■□□□□ 0.46
NPC1-207ENST00000588867 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.46
NPC1-207ENST00000588867 MPHOSPH8Q99549 860 aa17.89■□□□□ 0.46
NPC1-207ENST00000588867 RTL9Q8NET4 1388 aa17.89■□□□□ 0.45
NPC1-207ENST00000588867 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
NPC1-207ENST00000588867 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
NPC1-207ENST00000588867 DDX46Q7L014 1031 aaKnown RBP17.89■□□□□ 0.45
NPC1-207ENST00000588867 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
NPC1-207ENST00000588867 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.45
NPC1-207ENST00000588867 CIAO1O76071 339 aa17.88■□□□□ 0.45
NPC1-207ENST00000588867 TFCP2Q12800 502 aa17.88■□□□□ 0.45
NPC1-207ENST00000588867 RPGRQ92834 1020 aaKnown RBP17.88■□□□□ 0.45
NPC1-207ENST00000588867 BRIP1Q9BX63 1249 aa17.88■□□□□ 0.45
NPC1-207ENST00000588867 TAF1P21675 1872 aa17.88■□□□□ 0.45
NPC1-207ENST00000588867 ANKRD18AQ8IVF6 992 aa17.88■□□□□ 0.45
NPC1-207ENST00000588867 CLASRPQ8N2M8 674 aaKnown RBP17.88■□□□□ 0.45
NPC1-207ENST00000588867 FBXO3Q9UK99 471 aa17.88■□□□□ 0.45
NPC1-207ENST00000588867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
NPC1-207ENST00000588867 NRXN2Q9P2S2 1712 aa17.87■□□□□ 0.45
NPC1-207ENST00000588867 RIC1Q4ADV7 1423 aa17.86■□□□□ 0.45
NPC1-207ENST00000588867 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
NPC1-207ENST00000588867 CELF1Q92879 486 aaKnown RBP17.86■□□□□ 0.45
NPC1-207ENST00000588867 CEP126Q9P2H0 1117 aa17.86■□□□□ 0.45
NPC1-207ENST00000588867 RIPOR2Q9Y4F9 1068 aa17.86■□□□□ 0.45
NPC1-207ENST00000588867 PDE6BP35913 854 aa17.86■□□□□ 0.45
NPC1-207ENST00000588867 MTFR1LQ9H019 292 aa17.86■□□□□ 0.45
NPC1-207ENST00000588867 RPS8P62241 208 aaKnown RBP17.85■□□□□ 0.45
NPC1-207ENST00000588867 CRY2Q49AN0 593 aa17.85■□□□□ 0.45
NPC1-207ENST00000588867 METTL24Q5JXM2 366 aa17.85■□□□□ 0.45
NPC1-207ENST00000588867 AACSQ86V21 672 aa17.84■□□□□ 0.45
NPC1-207ENST00000588867 RBM17Q96I25 401 aaKnown RBP17.84■□□□□ 0.45
NPC1-207ENST00000588867 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
NPC1-207ENST00000588867 KLRG2A4D1S0 409 aaPredicted RBP17.84■□□□□ 0.45
NPC1-207ENST00000588867 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
NPC1-207ENST00000588867 POLD1P28340 1107 aa17.84■□□□□ 0.45
NPC1-207ENST00000588867 PLEKHM2Q8IWE5 1019 aa17.84■□□□□ 0.45
NPC1-207ENST00000588867 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
NPC1-207ENST00000588867 ANKRD31Q8N7Z5 1873 aa17.84■□□□□ 0.45
NPC1-207ENST00000588867 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.45
NPC1-207ENST00000588867 HELBQ8NG08 1087 aaPredicted RBP17.83■□□□□ 0.45
NPC1-207ENST00000588867 CCDC8Q9H0W5 538 aaPredicted RBP17.83■□□□□ 0.45
NPC1-207ENST00000588867 COL4A1P02462 1669 aa17.83■□□□□ 0.44
NPC1-207ENST00000588867 GRAPQ13588 217 aa17.82■□□□□ 0.44
NPC1-207ENST00000588867 TNNI3KQ59H18 835 aa17.82■□□□□ 0.44
NPC1-207ENST00000588867 GRAPLQ8TC17 118 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms