RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 LZTS2Q9BRK4 669 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 TSGA10Q9BZW7 698 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC144AA2RUR9 1427 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 PFDN1O60925 122 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 MYSM1Q5VVJ2 828 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 DNAJC14Q6Y2X3 702 aaPredicted RBP8.92□□□□□ -0.98
LAMA3-210ENST00000588770 TBC1D31Q96DN5 1066 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 PICK1Q9NRD5 415 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 EFCAB8A8MWE9 144 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 DDIT3P35638 169 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 CUL3Q13618 768 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 USP48Q86UV5 1035 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 CLASRPQ8N2M8 674 aaKnown RBP8.92□□□□□ -0.98
LAMA3-210ENST00000588770 FAM81AQ8TBF8 368 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 FAM71BQ8TC56 605 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 DTNBP1Q96EV8 351 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
LAMA3-210ENST00000588770 NUP62CLQ9H1M0 184 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 MMADHCQ9H3L0 296 aaPredicted RBP8.92□□□□□ -0.98
LAMA3-210ENST00000588770 UTP6Q9NYH9 597 aaKnown RBP8.92□□□□□ -0.98
LAMA3-210ENST00000588770 DYTNA2CJ06 578 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 NBPF7P0C2Y1 421 aaPredicted RBP8.92□□□□□ -0.98
LAMA3-210ENST00000588770 GNPTABQ3T906 1256 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC178Q5BJE1 867 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 DUSP27Q5VZP5 1158 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 DDX12PQ92771 950 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 MTRQ99707 1265 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 THUMPD2Q9BTF0 503 aaKnown RBP8.92□□□□□ -0.98
LAMA3-210ENST00000588770 TNMDQ9H2S6 317 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 ANKRD33BA6NCL7 494 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC69A6NI79 296 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 A1CFQ9NQ94 594 aaKnown RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 KIAA1107Q9UPP5 1409 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 XBP1P17861 261 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 SFPQP23246 707 aaKnown RBP eCLIP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 TRIM7Q9C029 511 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 SEPT11Q9NVA2 429 aaKnown RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 MIA2Q96PC5 1412 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 UBE2HP62256 183 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 MECOMQ03112 1051 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 PREPLQ4J6C6 727 aaPredicted RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC38Q502W7 563 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 KIRREL3Q8IZU9 778 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 OGFOD1Q8N543 542 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 BLOC1S6Q9UL45 172 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 TBC1D2BQ9UPU7 963 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 UACAQ9BZF9 1416 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 NDUFAB1O14561 156 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 CD151P48509 253 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 USP4Q13107 963 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 LRRFIP1Q32MZ4 808 aaKnown RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 CC2D1AQ6P1N0 951 aaPredicted RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC121Q6ZUS5 278 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 CCAR1Q8IX12 1150 aaKnown RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 RBM12BQ8IXT5 1001 aaKnown RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 FAM76AQ8TAV0 307 aa8.91□□□□□ -0.98
LAMA3-210ENST00000588770 PAIP2BQ9ULR5 123 aaKnown RBP8.91□□□□□ -0.98
LAMA3-210ENST00000588770 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
LAMA3-210ENST00000588770 TRIM21P19474 475 aaKnown RBP8.9□□□□□ -0.98
LAMA3-210ENST00000588770 MXRA7P84157 204 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 PPP2R3AQ06190 1150 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 BRD3Q15059 726 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 FOXR1Q6PIV2 292 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 SPATS2Q86XZ4 545 aaKnown RBP8.9□□□□□ -0.98
LAMA3-210ENST00000588770 GBP7Q8N8V2 638 aaPredicted RBP8.9□□□□□ -0.98
LAMA3-210ENST00000588770 FAM204AQ9H8W3 233 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 NSFL1CQ9UNZ2 370 aaKnown RBP8.9□□□□□ -0.98
LAMA3-210ENST00000588770 RIPOR2Q9Y4F9 1068 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 H3BQV1 296 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
LAMA3-210ENST00000588770 GRIK3Q13003 919 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 KCNB1Q14721 858 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 LONRF2Q1L5Z9 754 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC57Q2TAC2 916 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 IFFO2Q5TF58 517 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 BCAS4Q8TDM0 211 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 KLC4Q9NSK0 619 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 RAD54L2Q9Y4B4 1467 aa8.9□□□□□ -0.98
LAMA3-210ENST00000588770 NAT1P18440 290 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 MSL1Q68DK7 614 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 RCSD1Q6JBY9 416 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 OLFML1Q6UWY5 402 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 CEP128Q6ZU80 1094 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 SYCP3Q8IZU3 236 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 TRIM58Q8NG06 486 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 FAM53CQ9NYF3 392 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 E2F6O75461 281 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 TSGA10IPQ3SY00 556 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 MFN1Q8IWA4 741 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 KCNV2Q8TDN2 545 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 RABEP2Q9H5N1 569 aa8.9□□□□□ -0.99
LAMA3-210ENST00000588770 CFDP1Q9UEE9 299 aaPredicted RBP8.9□□□□□ -0.99
LAMA3-210ENST00000588770 TPX2Q9ULW0 747 aaKnown RBP8.9□□□□□ -0.99
LAMA3-210ENST00000588770 ZNF75DP51815 510 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 SLC8A3P57103 927 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 ZKSCAN4Q969J2 545 aaPredicted RBP8.89□□□□□ -0.99
LAMA3-210ENST00000588770 CFAP57Q96MR6 1250 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 EME2A4GXA9 379 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms