RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
APOC1-202ENST00000588750 ARHGAP27Q6ZUM4 889 aa10.3□□□□□ -0.76
APOC1-202ENST00000588750 GRAPLQ8TC17 118 aaPredicted RBP10.3□□□□□ -0.76
APOC1-202ENST00000588750 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
APOC1-202ENST00000588750 UBTFL1P0CB47 393 aaPredicted RBP10.29□□□□□ -0.76
APOC1-202ENST00000588750 TRIM27P14373 513 aa10.29□□□□□ -0.76
APOC1-202ENST00000588750 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
APOC1-202ENST00000588750 ANKRD18AQ8IVF6 992 aa10.29□□□□□ -0.76
APOC1-202ENST00000588750 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
APOC1-202ENST00000588750 SUPT20HQ8NEM7 779 aa10.29□□□□□ -0.76
APOC1-202ENST00000588750 COL11A2P13942 1736 aaPredicted RBP10.29□□□□□ -0.76
APOC1-202ENST00000588750 DDX60Q8IY21 1712 aaKnown RBP10.29□□□□□ -0.76
APOC1-202ENST00000588750 UTYO14607 1347 aa10.29□□□□□ -0.76
APOC1-202ENST00000588750 MYH3P11055 1940 aa10.29□□□□□ -0.76
APOC1-202ENST00000588750 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
APOC1-202ENST00000588750 RTL9Q8NET4 1388 aa10.28□□□□□ -0.76
APOC1-202ENST00000588750 ANKRD18BA2A2Z9 1011 aa10.28□□□□□ -0.76
APOC1-202ENST00000588750 C21orf2O43822 256 aa10.28□□□□□ -0.76
APOC1-202ENST00000588750 YBX3P16989 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
APOC1-202ENST00000588750 IGHMBP2P38935 993 aaKnown RBP10.28□□□□□ -0.76
APOC1-202ENST00000588750 IFIT5Q13325 482 aaKnown RBP10.28□□□□□ -0.76
APOC1-202ENST00000588750 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
APOC1-202ENST00000588750 VPS33BQ9H267 617 aa10.28□□□□□ -0.76
APOC1-202ENST00000588750 ABCC4O15439 1325 aa10.28□□□□□ -0.76
APOC1-202ENST00000588750 RPS8P62241 208 aaKnown RBP10.27□□□□□ -0.77
APOC1-202ENST00000588750 CCDC57Q2TAC2 916 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 TAF7LQ5H9L4 462 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 SYNE4Q8N205 404 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 TTLL11Q8NHH1 800 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 MPHOSPH8Q99549 860 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 WWC3Q9ULE0 1092 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 CHMP3Q9Y3E7 222 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 CACNA1SQ13698 1873 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 LTBP3Q9NS15 1303 aa10.27□□□□□ -0.77
APOC1-202ENST00000588750 ZC3H4Q9UPT8 1303 aaKnown RBP10.27□□□□□ -0.77
APOC1-202ENST00000588750 CSF1RP07333 972 aa10.26□□□□□ -0.77
APOC1-202ENST00000588750 LMNB1P20700 586 aa10.26□□□□□ -0.77
APOC1-202ENST00000588750 CASP7P55210 303 aa10.26□□□□□ -0.77
APOC1-202ENST00000588750 PSMD1Q99460 953 aa10.26□□□□□ -0.77
APOC1-202ENST00000588750 USP44Q9H0E7 712 aa10.26□□□□□ -0.77
APOC1-202ENST00000588750 CHD4Q14839 1912 aa10.26□□□□□ -0.77
APOC1-202ENST00000588750 NBPF7P0C2Y1 421 aaPredicted RBP10.25□□□□□ -0.77
APOC1-202ENST00000588750 ITGA6P23229 1130 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
APOC1-202ENST00000588750 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 LMBR1LQ6UX01 489 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 DPP8Q6V1X1 898 aaPredicted RBP10.25□□□□□ -0.77
APOC1-202ENST00000588750 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 ITPRIPQ8IWB1 547 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 MPNDQ8N594 471 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 JARID2Q92833 1246 aaPredicted RBP10.25□□□□□ -0.77
APOC1-202ENST00000588750 CLUAP1Q96AJ1 413 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 EYA3Q99504 573 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 BSDC1Q9NW68 430 aaPredicted RBP10.25□□□□□ -0.77
APOC1-202ENST00000588750 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 SLX4Q8IY92 1834 aa10.25□□□□□ -0.77
APOC1-202ENST00000588750 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
APOC1-202ENST00000588750 ANKRD2Q9GZV1 360 aa10.24□□□□□ -0.77
APOC1-202ENST00000588750 GREM2Q9H772 168 aa10.24□□□□□ -0.77
APOC1-202ENST00000588750 ANKIB1Q9P2G1 1089 aa10.24□□□□□ -0.77
APOC1-202ENST00000588750 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
APOC1-202ENST00000588750 GNAI2P04899 355 aa10.23□□□□□ -0.77
APOC1-202ENST00000588750 FOXO4P98177 505 aa10.23□□□□□ -0.77
APOC1-202ENST00000588750 RABL6Q3YEC7 729 aaPredicted RBP10.23□□□□□ -0.77
APOC1-202ENST00000588750 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
APOC1-202ENST00000588750 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
APOC1-202ENST00000588750 JDP2Q8WYK2 163 aa10.23□□□□□ -0.77
APOC1-202ENST00000588750 CELF1Q92879 486 aaKnown RBP10.23□□□□□ -0.77
APOC1-202ENST00000588750 SUCLG2Q96I99 432 aa10.23□□□□□ -0.77
APOC1-202ENST00000588750 CCDC85AQ96PX6 553 aaPredicted RBP10.23□□□□□ -0.77
APOC1-202ENST00000588750 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
APOC1-202ENST00000588750 NSFL1CQ9UNZ2 370 aaKnown RBP10.23□□□□□ -0.77
APOC1-202ENST00000588750 FER1L6Q2WGJ9 1857 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 G3V3G9 751 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 ATP2B4P23634 1241 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 YY1P25490 414 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 FAM161AQ3B820 660 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 LDHAL6AQ6ZMR3 332 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 RTFDC1Q9BY42 306 aaPredicted RBP10.22□□□□□ -0.77
APOC1-202ENST00000588750 BICC1Q9H694 974 aaKnown RBP10.22□□□□□ -0.77
APOC1-202ENST00000588750 SEC31BQ9NQW1 1179 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 CNNM1Q9NRU3 951 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 RNF181Q9P0P0 153 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 XDHP47989 1333 aa10.22□□□□□ -0.77
APOC1-202ENST00000588750 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
APOC1-202ENST00000588750 IARSP41252 1262 aaKnown RBP10.21□□□□□ -0.77
APOC1-202ENST00000588750 KCNJ4P48050 445 aa10.21□□□□□ -0.77
APOC1-202ENST00000588750 MVPQ14764 893 aaKnown RBP10.21□□□□□ -0.77
APOC1-202ENST00000588750 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.77
APOC1-202ENST00000588750 MEIS3Q99687 375 aa10.21□□□□□ -0.77
APOC1-202ENST00000588750 ZC3H12CQ9C0D7 883 aaKnown RBP10.21□□□□□ -0.77
APOC1-202ENST00000588750 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.77
APOC1-202ENST00000588750 GGA1Q9UJY5 639 aa10.21□□□□□ -0.77
APOC1-202ENST00000588750 LEMD3Q9Y2U8 911 aa10.21□□□□□ -0.77
APOC1-202ENST00000588750 LRRFIP2Q9Y608 721 aaKnown RBP10.21□□□□□ -0.77
APOC1-202ENST00000588750 MROH5Q6ZUA9 1318 aa10.21□□□□□ -0.78
APOC1-202ENST00000588750 LRRC37AA6NMS7 1700 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms