RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 ISCA1Q9BUE6 129 aa21.05■□□□□ 0.96
ERCC2-211ENST00000588652 TM6SF1Q9BZW5 370 aa21.05■□□□□ 0.96
ERCC2-211ENST00000588652 MED23Q9ULK4 1368 aa21.05■□□□□ 0.96
ERCC2-211ENST00000588652 CPA1P15085 419 aa21.04■□□□□ 0.96
ERCC2-211ENST00000588652 LRSAM1Q6UWE0 723 aa21.04■□□□□ 0.96
ERCC2-211ENST00000588652 RUFY3Q7L099 469 aa21.04■□□□□ 0.96
ERCC2-211ENST00000588652 LIMCH1Q9UPQ0 1083 aa21.04■□□□□ 0.96
ERCC2-211ENST00000588652 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
ERCC2-211ENST00000588652 JAKMIP1Q96N16 626 aaKnown RBP21.04■□□□□ 0.96
ERCC2-211ENST00000588652 ZSWIM6Q9HCJ5 1215 aa21.04■□□□□ 0.96
ERCC2-211ENST00000588652 ZNF330Q9Y3S2 320 aaPredicted RBP21.04■□□□□ 0.96
ERCC2-211ENST00000588652 KAT6BQ8WYB5 2073 aa21.03■□□□□ 0.96
ERCC2-211ENST00000588652 ZKSCAN1P17029 563 aaPredicted RBP21.03■□□□□ 0.96
ERCC2-211ENST00000588652 CREB3L3Q68CJ9 461 aa21.03■□□□□ 0.96
ERCC2-211ENST00000588652 RPAP1Q9BWH6 1393 aaPredicted RBP21.03■□□□□ 0.96
ERCC2-211ENST00000588652 COL16A1Q07092 1604 aaPredicted RBP21.03■□□□□ 0.96
ERCC2-211ENST00000588652 SYCE3A1L190 88 aa21.03■□□□□ 0.96
ERCC2-211ENST00000588652 NAP1L5Q96NT1 182 aaPredicted RBP21.03■□□□□ 0.96
ERCC2-211ENST00000588652 COL22A1Q8NFW1 1626 aaPredicted RBP21.02■□□□□ 0.96
ERCC2-211ENST00000588652 WDR33Q9C0J8 1336 aaKnown RBP21.02■□□□□ 0.96
ERCC2-211ENST00000588652 KCNJ4P48050 445 aa21.02■□□□□ 0.96
ERCC2-211ENST00000588652 VPS53Q5VIR6 699 aa21.02■□□□□ 0.96
ERCC2-211ENST00000588652 TCHHQ07283 1943 aa21.02■□□□□ 0.96
ERCC2-211ENST00000588652 PLCH1Q4KWH8 1693 aa21.02■□□□□ 0.96
ERCC2-211ENST00000588652 AHDC1Q5TGY3 1603 aaPredicted RBP21.02■□□□□ 0.96
ERCC2-211ENST00000588652 STARD3NLO95772 234 aa21.02■□□□□ 0.95
ERCC2-211ENST00000588652 IL15P40933 162 aaPredicted RBP21.02■□□□□ 0.95
ERCC2-211ENST00000588652 ZNF589Q86UQ0 364 aaPredicted RBP21.02■□□□□ 0.95
ERCC2-211ENST00000588652 HAUS7Q99871 368 aa21.02■□□□□ 0.95
ERCC2-211ENST00000588652 CYP46A1Q9Y6A2 500 aa21.02■□□□□ 0.95
ERCC2-211ENST00000588652 NDUFB9Q9Y6M9 179 aa21.02■□□□□ 0.95
ERCC2-211ENST00000588652 BCL9O00512 1426 aa21.01■□□□□ 0.95
ERCC2-211ENST00000588652 JCADQ9P266 1359 aa21.01■□□□□ 0.95
ERCC2-211ENST00000588652 TRIM28Q13263 835 aaKnown RBP21.01■□□□□ 0.95
ERCC2-211ENST00000588652 LARP6Q9BRS8 491 aaKnown RBP21.01■□□□□ 0.95
ERCC2-211ENST00000588652 GPR108Q9NPR9 543 aa21.01■□□□□ 0.95
ERCC2-211ENST00000588652 DNAJC2Q99543 621 aaKnown RBP21■□□□□ 0.95
ERCC2-211ENST00000588652 PDRG1Q9NUG6 133 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 RFX7Q2KHR2 1363 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 EYA2O00167 538 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 SLC27A2O14975 620 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 KIF6Q6ZMV9 814 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 ZSCAN30Q86W11 494 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 ZNF594Q96JF6 807 aaPredicted RBP21■□□□□ 0.95
ERCC2-211ENST00000588652 PDLIM2Q96JY6 352 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 LRP6O75581 1613 aa21■□□□□ 0.95
ERCC2-211ENST00000588652 LRRC24Q50LG9 513 aa20.99■□□□□ 0.95
ERCC2-211ENST00000588652 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.99■□□□□ 0.95
ERCC2-211ENST00000588652 TAF5LO75529 589 aa20.98■□□□□ 0.95
ERCC2-211ENST00000588652 NEUROD6Q96NK8 337 aa20.98■□□□□ 0.95
ERCC2-211ENST00000588652 EXOC5O00471 708 aa20.98■□□□□ 0.95
ERCC2-211ENST00000588652 CIAO1O76071 339 aa20.98■□□□□ 0.95
ERCC2-211ENST00000588652 TIMM10P62072 90 aa20.98■□□□□ 0.95
ERCC2-211ENST00000588652 RNF20Q5VTR2 975 aa20.98■□□□□ 0.95
ERCC2-211ENST00000588652 SLC4A9Q96Q91 983 aa20.98■□□□□ 0.95
ERCC2-211ENST00000588652 WNK3Q9BYP7 1800 aa20.97■□□□□ 0.95
ERCC2-211ENST00000588652 LARGE1O95461 756 aa20.97■□□□□ 0.95
ERCC2-211ENST00000588652 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.97■□□□□ 0.95
ERCC2-211ENST00000588652 PCCAP05165 728 aaPredicted RBP20.97■□□□□ 0.95
ERCC2-211ENST00000588652 ADRA2BP18089 450 aa20.97■□□□□ 0.95
ERCC2-211ENST00000588652 FOXD4L6Q3SYB3 417 aaPredicted RBP20.97■□□□□ 0.95
ERCC2-211ENST00000588652 FOXD4L3Q6VB84 417 aaPredicted RBP20.97■□□□□ 0.95
ERCC2-211ENST00000588652 DDX46Q7L014 1031 aaKnown RBP20.97■□□□□ 0.95
ERCC2-211ENST00000588652 ZNF609O15014 1411 aa20.97■□□□□ 0.95
ERCC2-211ENST00000588652 MAP3K15Q6ZN16 1313 aa20.97■□□□□ 0.95
ERCC2-211ENST00000588652 PSMA5P28066 241 aa20.96■□□□□ 0.95
ERCC2-211ENST00000588652 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
ERCC2-211ENST00000588652 PUS3Q9BZE2 481 aaKnown RBP20.96■□□□□ 0.95
ERCC2-211ENST00000588652 GDPD2Q9HCC8 539 aa20.96■□□□□ 0.95
ERCC2-211ENST00000588652 CCDC9Q9Y3X0 531 aaKnown RBP20.96■□□□□ 0.95
ERCC2-211ENST00000588652 GADD45BO75293 160 aaPredicted RBP20.96■□□□□ 0.95
ERCC2-211ENST00000588652 CHGBP05060 677 aa20.96■□□□□ 0.95
ERCC2-211ENST00000588652 HS1BP3Q53T59 392 aa20.96■□□□□ 0.95
ERCC2-211ENST00000588652 USP48Q86UV5 1035 aa20.96■□□□□ 0.95
ERCC2-211ENST00000588652 KBTBD3Q8NAB2 608 aa20.96■□□□□ 0.95
ERCC2-211ENST00000588652 FAM89AQ96GI7 184 aa20.96■□□□□ 0.95
ERCC2-211ENST00000588652 CYP19A1P11511 503 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-211ENST00000588652 CCDC57Q2TAC2 916 aa20.95■□□□□ 0.94
ERCC2-211ENST00000588652 USPL1Q5W0Q7 1092 aa20.95■□□□□ 0.94
ERCC2-211ENST00000588652 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-211ENST00000588652 SYAP1Q96A49 352 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-211ENST00000588652 ZSCAN31Q96LW9 406 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-211ENST00000588652 COL9A3Q14050 684 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-211ENST00000588652 TSGA10IPQ3SY00 556 aa20.95■□□□□ 0.94
ERCC2-211ENST00000588652 TMEM87AQ8NBN3 555 aa20.95■□□□□ 0.94
ERCC2-211ENST00000588652 PLA2G12BQ9BX93 195 aa20.95■□□□□ 0.94
ERCC2-211ENST00000588652 SH2B1Q9NRF2 756 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-211ENST00000588652 HMG20BQ9P0W2 317 aa20.95■□□□□ 0.94
ERCC2-211ENST00000588652 TAF6LQ9Y6J9 622 aa20.95■□□□□ 0.94
ERCC2-211ENST00000588652 A0A1B0GUL7 405 aa20.94■□□□□ 0.94
ERCC2-211ENST00000588652 SYTL4Q96C24 671 aaPredicted RBP20.94■□□□□ 0.94
ERCC2-211ENST00000588652 ZSCAN22P10073 491 aaPredicted RBP20.94■□□□□ 0.94
ERCC2-211ENST00000588652 HLFQ16534 295 aa20.94■□□□□ 0.94
ERCC2-211ENST00000588652 SEC62Q99442 399 aaKnown RBP20.94■□□□□ 0.94
ERCC2-211ENST00000588652 PALLDQ8WX93 1383 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 MCMDC2Q4G0Z9 681 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 CCDC83Q8IWF9 413 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 PAG1Q9NWQ8 432 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 FBXO3Q9UK99 471 aa20.93■□□□□ 0.94
ERCC2-211ENST00000588652 SMC3Q9UQE7 1217 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms