RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 AOC2O75106 756 aa18.16■□□□□ 0.5
CLPTM1-208ENST00000588274 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
CLPTM1-208ENST00000588274 RIPK4P57078 832 aa18.16■□□□□ 0.5
CLPTM1-208ENST00000588274 DPP8Q6V1X1 898 aaPredicted RBP18.16■□□□□ 0.5
CLPTM1-208ENST00000588274 GPR101Q96P66 508 aaPredicted RBP18.16■□□□□ 0.5
CLPTM1-208ENST00000588274 GLIS2Q9BZE0 524 aaPredicted RBP18.16■□□□□ 0.5
CLPTM1-208ENST00000588274 BBOX1O75936 387 aa18.15■□□□□ 0.5
CLPTM1-208ENST00000588274 ECE1P42892 770 aa18.15■□□□□ 0.5
CLPTM1-208ENST00000588274 TCIRG1Q13488 830 aa18.15■□□□□ 0.5
CLPTM1-208ENST00000588274 GRAPQ13588 217 aa18.15■□□□□ 0.5
CLPTM1-208ENST00000588274 SUPT20HQ8NEM7 779 aa18.15■□□□□ 0.5
CLPTM1-208ENST00000588274 GRAPLQ8TC17 118 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-208ENST00000588274 CIAPIN1Q6FI81 312 aa18.14■□□□□ 0.49
CLPTM1-208ENST00000588274 MPNDQ8N594 471 aa18.14■□□□□ 0.49
CLPTM1-208ENST00000588274 HHIPL1Q96JK4 782 aa18.14■□□□□ 0.49
CLPTM1-208ENST00000588274 PNNQ9H307 717 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-208ENST00000588274 SH3TC1Q8TE82 1336 aa18.14■□□□□ 0.49
CLPTM1-208ENST00000588274 CHL1O00533 1208 aa18.13■□□□□ 0.49
CLPTM1-208ENST00000588274 RAD17O75943 681 aa18.13■□□□□ 0.49
CLPTM1-208ENST00000588274 CELF2O95319 508 aaKnown RBP18.13■□□□□ 0.49
CLPTM1-208ENST00000588274 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
CLPTM1-208ENST00000588274 NECTIN2Q92692 538 aa18.13■□□□□ 0.49
CLPTM1-208ENST00000588274 MAP2K2P36507 400 aa18.12■□□□□ 0.49
CLPTM1-208ENST00000588274 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
CLPTM1-208ENST00000588274 ZC3H15Q8WU90 426 aaKnown RBP18.12■□□□□ 0.49
CLPTM1-208ENST00000588274 CHPF2Q9P2E5 772 aa18.12■□□□□ 0.49
CLPTM1-208ENST00000588274 TRMT112Q9UI30 125 aaKnown RBP18.12■□□□□ 0.49
CLPTM1-208ENST00000588274 TSKSQ9UJT2 592 aa18.12■□□□□ 0.49
CLPTM1-208ENST00000588274 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
CLPTM1-208ENST00000588274 EGFRP00533 1210 aa18.11■□□□□ 0.49
CLPTM1-208ENST00000588274 GRM1Q13255 1194 aa18.11■□□□□ 0.49
CLPTM1-208ENST00000588274 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
CLPTM1-208ENST00000588274 PAXIP1Q6ZW49 1069 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-208ENST00000588274 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
CLPTM1-208ENST00000588274 ISCA1Q9BUE6 129 aa18.11■□□□□ 0.49
CLPTM1-208ENST00000588274 RTL9Q8NET4 1388 aa18.11■□□□□ 0.49
CLPTM1-208ENST00000588274 SCN9AQ15858 1988 aa18.1■□□□□ 0.49
CLPTM1-208ENST00000588274 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
CLPTM1-208ENST00000588274 CELF1Q92879 486 aaKnown RBP18.1■□□□□ 0.49
CLPTM1-208ENST00000588274 ZIC5Q96T25 663 aa18.1■□□□□ 0.49
CLPTM1-208ENST00000588274 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-208ENST00000588274 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
CLPTM1-208ENST00000588274 SF3B3Q15393 1217 aaKnown RBP18.09■□□□□ 0.49
CLPTM1-208ENST00000588274 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
CLPTM1-208ENST00000588274 MICALL2Q8IY33 904 aa18.09■□□□□ 0.49
CLPTM1-208ENST00000588274 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-208ENST00000588274 TNRC18O15417 2968 aaPredicted RBP18.08■□□□□ 0.49
CLPTM1-208ENST00000588274 RGS19P49795 217 aa18.08■□□□□ 0.48
CLPTM1-208ENST00000588274 TNIP1Q15025 636 aa18.08■□□□□ 0.48
CLPTM1-208ENST00000588274 TMC4Q7Z404 712 aa18.08■□□□□ 0.48
CLPTM1-208ENST00000588274 PLBD2Q8NHP8 589 aa18.08■□□□□ 0.48
CLPTM1-208ENST00000588274 TMX4Q9H1E5 349 aaPredicted RBP18.08■□□□□ 0.48
CLPTM1-208ENST00000588274 POLLQ9UGP5 575 aa18.08■□□□□ 0.48
CLPTM1-208ENST00000588274 CNOT7Q9UIV1 285 aaKnown RBP18.08■□□□□ 0.48
CLPTM1-208ENST00000588274 PSMD14O00487 310 aa18.07■□□□□ 0.48
CLPTM1-208ENST00000588274 RALBP1Q15311 655 aa18.07■□□□□ 0.48
CLPTM1-208ENST00000588274 CDC37L1Q7L3B6 337 aa18.07■□□□□ 0.48
CLPTM1-208ENST00000588274 CCDC146Q8IYE0 955 aa18.07■□□□□ 0.48
CLPTM1-208ENST00000588274 DPF2Q92785 391 aa18.07■□□□□ 0.48
CLPTM1-208ENST00000588274 FAM89AQ96GI7 184 aa18.07■□□□□ 0.48
CLPTM1-208ENST00000588274 ZNF609O15014 1411 aa18.06■□□□□ 0.48
CLPTM1-208ENST00000588274 FAM155AB1AL88 458 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-208ENST00000588274 HOXB7P09629 217 aa18.06■□□□□ 0.48
CLPTM1-208ENST00000588274 GPSM2P81274 684 aa18.06■□□□□ 0.48
CLPTM1-208ENST00000588274 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
CLPTM1-208ENST00000588274 DBNDD1Q9H9R9 158 aa18.06■□□□□ 0.48
CLPTM1-208ENST00000588274 KCNQ5Q9NR82 932 aa18.06■□□□□ 0.48
CLPTM1-208ENST00000588274 CA12O43570 354 aa18.05■□□□□ 0.48
CLPTM1-208ENST00000588274 HDGFL1Q5TGJ6 251 aa18.05■□□□□ 0.48
CLPTM1-208ENST00000588274 SAMD7Q7Z3H4 446 aa18.05■□□□□ 0.48
CLPTM1-208ENST00000588274 BEGAINQ9BUH8 593 aa18.05■□□□□ 0.48
CLPTM1-208ENST00000588274 ZNF408Q9H9D4 720 aa18.05■□□□□ 0.48
CLPTM1-208ENST00000588274 PSME4Q14997 1843 aa18.05■□□□□ 0.48
CLPTM1-208ENST00000588274 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
CLPTM1-208ENST00000588274 SLC34A2O95436 690 aa18.04■□□□□ 0.48
CLPTM1-208ENST00000588274 ANKRD13DQ6ZTN6 518 aa18.04■□□□□ 0.48
CLPTM1-208ENST00000588274 USP48Q86UV5 1035 aa18.04■□□□□ 0.48
CLPTM1-208ENST00000588274 MCOLN1Q9GZU1 580 aa18.04■□□□□ 0.48
CLPTM1-208ENST00000588274 ZNF646O15015 1829 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-208ENST00000588274 CASP8AP2Q9UKL3 1982 aa18.04■□□□□ 0.48
CLPTM1-208ENST00000588274 MYBBP1AQ9BQG0 1328 aaKnown RBP18.03■□□□□ 0.48
CLPTM1-208ENST00000588274 TRIM28Q13263 835 aaKnown RBP18.03■□□□□ 0.48
CLPTM1-208ENST00000588274 NEUROD2Q15784 382 aa18.03■□□□□ 0.48
CLPTM1-208ENST00000588274 WASHC4Q2M389 1173 aa18.03■□□□□ 0.48
CLPTM1-208ENST00000588274 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
CLPTM1-208ENST00000588274 ADM5C9JUS6 153 aa18.02■□□□□ 0.48
CLPTM1-208ENST00000588274 ECE2O60344 883 aa18.02■□□□□ 0.48
CLPTM1-208ENST00000588274 NOGQ13253 232 aa18.02■□□□□ 0.48
CLPTM1-208ENST00000588274 TBC1D10BQ4KMP7 808 aaPredicted RBP18.02■□□□□ 0.48
CLPTM1-208ENST00000588274 TBC1D16Q8TBP0 767 aa18.02■□□□□ 0.48
CLPTM1-208ENST00000588274 NSFL1CQ9UNZ2 370 aaKnown RBP18.02■□□□□ 0.48
CLPTM1-208ENST00000588274 ASTN2O75129 1339 aaPredicted RBP18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 CCDC85CA6NKD9 419 aa18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 H7C1D1 291 aa18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 RPS12P25398 132 aaKnown RBP18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 HUNKP57058 714 aa18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 RUNDC1Q96C34 613 aa18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 MBIPQ9NS73 344 aa18.01■□□□□ 0.47
CLPTM1-208ENST00000588274 PODXL2Q9NZ53 605 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 430.3 ms