RNA–Protein interactions for RNA: ENST00000588223.5

LINC00663-204, long intergenic non-protein coding RNA 663, humanhuman

TSL 4 BASIC

Gene LINC00663, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00663-204ENST00000588223 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
LINC00663-204ENST00000588223 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
LINC00663-204ENST00000588223 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
LINC00663-204ENST00000588223 RAD50Q92878 1312 aa12.86□□□□□ -0.35
LINC00663-204ENST00000588223 RFX7Q2KHR2 1363 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 ANKRD18BA2A2Z9 1011 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 CAMTA2O94983 1202 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 HMGB2P26583 209 aaKnown RBP12.85□□□□□ -0.35
LINC00663-204ENST00000588223 MCM2P49736 904 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 CTSWP56202 376 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
LINC00663-204ENST00000588223 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
LINC00663-204ENST00000588223 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
LINC00663-204ENST00000588223 NUP98P52948 1817 aa12.84□□□□□ -0.35
LINC00663-204ENST00000588223 K7ELQ4 463 aaPredicted RBP12.84□□□□□ -0.35
LINC00663-204ENST00000588223 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
LINC00663-204ENST00000588223 FSD1Q9BTV5 496 aa12.84□□□□□ -0.35
LINC00663-204ENST00000588223 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
LINC00663-204ENST00000588223 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
LINC00663-204ENST00000588223 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
LINC00663-204ENST00000588223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00663-204ENST00000588223 IL17RAQ96F46 866 aa12.83□□□□□ -0.36
LINC00663-204ENST00000588223 NEUROD6Q96NK8 337 aa12.83□□□□□ -0.36
LINC00663-204ENST00000588223 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
LINC00663-204ENST00000588223 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.36
LINC00663-204ENST00000588223 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
LINC00663-204ENST00000588223 ITGA6P23229 1130 aa12.82□□□□□ -0.36
LINC00663-204ENST00000588223 LRRFIP1Q32MZ4 808 aaKnown RBP12.82□□□□□ -0.36
LINC00663-204ENST00000588223 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
LINC00663-204ENST00000588223 CWC27Q6UX04 472 aaKnown RBP12.82□□□□□ -0.36
LINC00663-204ENST00000588223 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
LINC00663-204ENST00000588223 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
LINC00663-204ENST00000588223 ZNF594Q96JF6 807 aaPredicted RBP12.82□□□□□ -0.36
LINC00663-204ENST00000588223 HAUS7Q99871 368 aa12.82□□□□□ -0.36
LINC00663-204ENST00000588223 DBNDD2Q9BQY9 259 aa12.82□□□□□ -0.36
LINC00663-204ENST00000588223 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
LINC00663-204ENST00000588223 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
LINC00663-204ENST00000588223 NIP7Q9Y221 180 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00663-204ENST00000588223 UBN2Q6ZU65 1347 aa12.82□□□□□ -0.36
LINC00663-204ENST00000588223 ZNF609O15014 1411 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 HSPA4P34932 840 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 GORABQ5T7V8 394 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 SUSD4Q5VX71 490 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 QTRT2Q9H974 415 aaKnown RBP12.81□□□□□ -0.36
LINC00663-204ENST00000588223 CNNM1Q9NRU3 951 aa12.81□□□□□ -0.36
LINC00663-204ENST00000588223 CCNL1Q9UK58 526 aaPredicted RBP12.81□□□□□ -0.36
LINC00663-204ENST00000588223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.81□□□□□ -0.36
LINC00663-204ENST00000588223 A0A1B0GUL7 405 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 NBR1Q14596 966 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 METTL24Q5JXM2 366 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 LSG1Q9H089 658 aaKnown RBP12.8□□□□□ -0.36
LINC00663-204ENST00000588223 ANTXR1Q9H6X2 564 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 GREM2Q9H772 168 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
LINC00663-204ENST00000588223 BTAF1O14981 1849 aa12.79□□□□□ -0.36
LINC00663-204ENST00000588223 IFIT1P09914 478 aaKnown RBP12.79□□□□□ -0.36
LINC00663-204ENST00000588223 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC00663-204ENST00000588223 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
LINC00663-204ENST00000588223 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
LINC00663-204ENST00000588223 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
LINC00663-204ENST00000588223 NYXQ9GZU5 481 aa12.79□□□□□ -0.36
LINC00663-204ENST00000588223 RTCBQ9Y3I0 505 aaKnown RBP12.79□□□□□ -0.36
LINC00663-204ENST00000588223 MYH3P11055 1940 aa12.79□□□□□ -0.36
LINC00663-204ENST00000588223 MROH5Q6ZUA9 1318 aa12.79□□□□□ -0.36
LINC00663-204ENST00000588223 RTL9Q8NET4 1388 aa12.79□□□□□ -0.36
LINC00663-204ENST00000588223 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
LINC00663-204ENST00000588223 ZPR1O75312 459 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 NTSR2O95665 410 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 ZKSCAN1P17029 563 aaPredicted RBP12.78□□□□□ -0.36
LINC00663-204ENST00000588223 KCNJ4P48050 445 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 TIMM10P62072 90 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
LINC00663-204ENST00000588223 ATP2B3Q16720 1220 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 TTC39AQ5SRH9 613 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 FAM196AQ6ZSG2 479 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 KBTBD3Q8NAB2 608 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
LINC00663-204ENST00000588223 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 RIPOR2Q9Y4F9 1068 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 BCORQ6W2J9 1755 aa12.78□□□□□ -0.36
LINC00663-204ENST00000588223 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 IGHMBP2P38935 993 aaKnown RBP12.77□□□□□ -0.37
LINC00663-204ENST00000588223 NEK4P51957 841 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 NFKBIBQ15653 356 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 SYNE4Q8N205 404 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 CWC22Q9HCG8 908 aaKnown RBP12.77□□□□□ -0.37
LINC00663-204ENST00000588223 PAG1Q9NWQ8 432 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 CCDC171Q6TFL3 1326 aa12.77□□□□□ -0.37
LINC00663-204ENST00000588223 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
LINC00663-204ENST00000588223 GNPATO15228 680 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms