RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 SF3B3Q15393 1217 aaKnown RBP14.96□□□□□ -0.01
SDHDP1-201ENST00000588055 CCDC93Q567U6 631 aa14.96□□□□□ -0.01
SDHDP1-201ENST00000588055 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
SDHDP1-201ENST00000588055 JARID2Q92833 1246 aaPredicted RBP14.96□□□□□ -0.01
SDHDP1-201ENST00000588055 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
SDHDP1-201ENST00000588055 HDAC5Q9UQL6 1122 aa14.96□□□□□ -0.01
SDHDP1-201ENST00000588055 SLX4Q8IY92 1834 aa14.96□□□□□ -0.01
SDHDP1-201ENST00000588055 C21orf2O43822 256 aa14.95□□□□□ -0.02
SDHDP1-201ENST00000588055 GRAPQ13588 217 aa14.95□□□□□ -0.02
SDHDP1-201ENST00000588055 ARHGAP27Q6ZUM4 889 aa14.95□□□□□ -0.02
SDHDP1-201ENST00000588055 TMC4Q7Z404 712 aa14.95□□□□□ -0.02
SDHDP1-201ENST00000588055 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
SDHDP1-201ENST00000588055 CDC5LQ99459 802 aaKnown RBP14.95□□□□□ -0.02
SDHDP1-201ENST00000588055 PLA2G12BQ9BX93 195 aa14.95□□□□□ -0.02
SDHDP1-201ENST00000588055 CHD4Q14839 1912 aa14.94□□□□□ -0.02
SDHDP1-201ENST00000588055 CLUAP1Q96AJ1 413 aa14.94□□□□□ -0.02
SDHDP1-201ENST00000588055 CHMP3Q9Y3E7 222 aa14.94□□□□□ -0.02
SDHDP1-201ENST00000588055 BBOX1O75936 387 aa14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 UBTFL1P0CB47 393 aaPredicted RBP14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 GRIPAP1Q4V328 841 aa14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 RTKN2Q8IZC4 609 aa14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 CCDC85AQ96PX6 553 aaPredicted RBP14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 RTL9Q8NET4 1388 aa14.93□□□□□ -0.02
SDHDP1-201ENST00000588055 CASP7P55210 303 aa14.92□□□□□ -0.02
SDHDP1-201ENST00000588055 INTS3Q68E01 1043 aaKnown RBP14.92□□□□□ -0.02
SDHDP1-201ENST00000588055 ANKRD18AQ8IVF6 992 aa14.92□□□□□ -0.02
SDHDP1-201ENST00000588055 TAOK3Q9H2K8 898 aa14.92□□□□□ -0.02
SDHDP1-201ENST00000588055 UTYO14607 1347 aa14.92□□□□□ -0.02
SDHDP1-201ENST00000588055 FER1L6Q2WGJ9 1857 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 GNAI3P08754 354 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 NBPF7P0C2Y1 421 aaPredicted RBP14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 IGHMBP2P38935 993 aaKnown RBP14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 FAM161AQ3B820 660 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 ITPRIPQ8IWB1 547 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 TTLL11Q8NHH1 800 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 SPEF2Q9C093 1822 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 LRRC37AA6NMS7 1700 aa14.91□□□□□ -0.02
SDHDP1-201ENST00000588055 ANKRD18BA2A2Z9 1011 aa14.9□□□□□ -0.02
SDHDP1-201ENST00000588055 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
SDHDP1-201ENST00000588055 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
SDHDP1-201ENST00000588055 SUCLG2Q96I99 432 aa14.9□□□□□ -0.02
SDHDP1-201ENST00000588055 GREM2Q9H772 168 aa14.9□□□□□ -0.02
SDHDP1-201ENST00000588055 ATP6V0A2Q9Y487 856 aa14.9□□□□□ -0.02
SDHDP1-201ENST00000588055 TAF1P21675 1872 aa14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 ITGA6P23229 1130 aa14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 RPS8P62241 208 aaKnown RBP14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 LMBR1LQ6UX01 489 aa14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 TMEM57Q8N5G2 664 aa14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 CELF1Q92879 486 aaKnown RBP14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 MPHOSPH8Q99549 860 aa14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 USP44Q9H0E7 712 aa14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 LTBP3Q9NS15 1303 aa14.89□□□□□ -0.03
SDHDP1-201ENST00000588055 LMNB1P20700 586 aa14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 FKBP4Q02790 459 aaKnown RBP eCLIP14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 RASSF7Q02833 373 aa14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 DPP8Q6V1X1 898 aaPredicted RBP14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 SP8Q8IXZ3 490 aa14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 SUPT20HQ8NEM7 779 aa14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 BICC1Q9H694 974 aaKnown RBP14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 SEC31BQ9NQW1 1179 aa14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 TIAM2Q8IVF5 1701 aa14.88□□□□□ -0.03
SDHDP1-201ENST00000588055 NFKBIEO00221 500 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 CSF1RP07333 972 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 FOXO4P98177 505 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 C7orf43Q8WVR3 580 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 PSMD1Q99460 953 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 MEIS3Q99687 375 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 CHMP4BQ9H444 224 aaKnown RBP14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 RNF181Q9P0P0 153 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 TNNQ9UQP3 1299 aa14.87□□□□□ -0.03
SDHDP1-201ENST00000588055 YY1P25490 414 aa14.86□□□□□ -0.03
SDHDP1-201ENST00000588055 OLFM4Q6UX06 510 aa14.86□□□□□ -0.03
SDHDP1-201ENST00000588055 MPNDQ8N594 471 aa14.86□□□□□ -0.03
SDHDP1-201ENST00000588055 ANKIB1Q9P2G1 1089 aa14.86□□□□□ -0.03
SDHDP1-201ENST00000588055 GNAI2P04899 355 aa14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 EPHA10Q5JZY3 1008 aa14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 C9orf131Q5VYM1 1079 aa14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 PANK1Q8TE04 598 aa14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 BSDC1Q9NW68 430 aaPredicted RBP14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 LRRFIP2Q9Y608 721 aaKnown RBP14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 ZC3H4Q9UPT8 1303 aaKnown RBP14.85□□□□□ -0.03
SDHDP1-201ENST00000588055 SBF1O95248 1867 aa14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 COL4A1P02462 1669 aa14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 PLIN1O60240 522 aa14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 RLBP1P12271 317 aa14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 DDX19BQ9UMR2 479 aa14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 NSFL1CQ9UNZ2 370 aaKnown RBP14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 XDHP47989 1333 aa14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
SDHDP1-201ENST00000588055 SNED1Q8TER0 1413 aa14.83□□□□□ -0.03
SDHDP1-201ENST00000588055 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
SDHDP1-201ENST00000588055 RRP1P56182 461 aaKnown RBP14.83□□□□□ -0.04
SDHDP1-201ENST00000588055 PDE3AQ14432 1141 aa14.83□□□□□ -0.04
SDHDP1-201ENST00000588055 MVPQ14764 893 aaKnown RBP14.83□□□□□ -0.04
SDHDP1-201ENST00000588055 ANKRD44Q8N8A2 993 aa14.83□□□□□ -0.04
SDHDP1-201ENST00000588055 EYA3Q99504 573 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms