RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 CHMP4AQ9BY43 222 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 SMC4Q9NTJ3 1288 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 IFT57Q9NWB7 429 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 BABAM1Q9NWV8 329 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 SIPA1L3O60292 1781 aaPredicted RBP7.25□□□□□ -1.25
SDF2-206ENST00000587788 ADAMTS7Q9UKP4 1686 aa7.25□□□□□ -1.25
SDF2-206ENST00000587788 MOXD2PA6NHM9 499 aa7.24□□□□□ -1.25
SDF2-206ENST00000587788 CYP27B1O15528 508 aa7.24□□□□□ -1.25
SDF2-206ENST00000587788 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
SDF2-206ENST00000587788 USP46P62068 366 aa7.24□□□□□ -1.25
SDF2-206ENST00000587788 HDAC1Q13547 482 aaPredicted RBP7.24□□□□□ -1.25
SDF2-206ENST00000587788 ATF7IPQ6VMQ6 1270 aa7.24□□□□□ -1.25
SDF2-206ENST00000587788 ZCRB1Q8TBF4 217 aaKnown RBP7.24□□□□□ -1.25
SDF2-206ENST00000587788 RAPGEF4Q8WZA2 1011 aa7.24□□□□□ -1.25
SDF2-206ENST00000587788 KDRP35968 1356 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 KDM4AO75164 1064 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 IGHDP01880 384 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 RFC5P40937 340 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 NUTM1Q86Y26 1132 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 RDH13Q8NBN7 331 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 SSH1Q8WYL5 1049 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 NBPF3Q9H094 633 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 COL5A3P25940 1745 aaPredicted RBP7.23□□□□□ -1.25
SDF2-206ENST00000587788 LRP5O75197 1615 aa7.23□□□□□ -1.25
SDF2-206ENST00000587788 UBR3Q6ZT12 1888 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 GNAT3A8MTJ3 354 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 HOXA2O43364 376 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 ZNF853P0CG23 659 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 LSM11P83369 360 aaKnown RBP eCLIP7.22□□□□□ -1.25
SDF2-206ENST00000587788 MTHFSDQ2M296 383 aaKnown RBP7.22□□□□□ -1.25
SDF2-206ENST00000587788 C8orf34Q49A92 452 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 NPM2Q86SE8 214 aaKnown RBP7.22□□□□□ -1.25
SDF2-206ENST00000587788 TSR2Q969E8 191 aaKnown RBP7.22□□□□□ -1.25
SDF2-206ENST00000587788 SPG7Q9UQ90 795 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 PCDH11XQ9BZA7 1347 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 PCDH11YQ9BZA8 1340 aa7.22□□□□□ -1.25
SDF2-206ENST00000587788 TJP1Q07157 1748 aa7.21□□□□□ -1.25
SDF2-206ENST00000587788 UBR2Q8IWV8 1755 aa7.21□□□□□ -1.25
SDF2-206ENST00000587788 KDM6AO15550 1401 aaPredicted RBP7.21□□□□□ -1.25
SDF2-206ENST00000587788 A6NJR5 290 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 HRO43593 1189 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 EIF5BO60841 1220 aaKnown RBP7.21□□□□□ -1.26
SDF2-206ENST00000587788 LILRB3O75022 631 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 RLBP1P12271 317 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 TRIM27P14373 513 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 RGS3P49796 1198 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 AKAP4Q5JQC9 854 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 BANK1Q8NDB2 785 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 FAM163AQ96GL9 167 aaPredicted RBP7.21□□□□□ -1.26
SDF2-206ENST00000587788 UPF2Q9HAU5 1272 aaKnown RBP7.21□□□□□ -1.26
SDF2-206ENST00000587788 NOB1Q9ULX3 412 aaKnown RBP7.21□□□□□ -1.26
SDF2-206ENST00000587788 PCDHB15Q9Y5E8 787 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 COL24A1Q17RW2 1714 aa7.21□□□□□ -1.26
SDF2-206ENST00000587788 PLEKHG2Q9H7P9 1386 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 ZNF831Q5JPB2 1677 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 SPDYE5A6NIY4 337 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 CHL1O00533 1208 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 PLSCR1O15162 318 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 HSP90AB1P08238 724 aaKnown RBP7.2□□□□□ -1.26
SDF2-206ENST00000587788 PHKG2P15735 406 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 NDUFV2P19404 249 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 KCNQ4P56696 695 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 R3HDM1Q15032 1099 aaKnown RBP7.2□□□□□ -1.26
SDF2-206ENST00000587788 TAF7Q15545 349 aaPredicted RBP7.2□□□□□ -1.26
SDF2-206ENST00000587788 QPCTQ16769 361 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 RTL5Q5HYW3 569 aaPredicted RBP7.2□□□□□ -1.26
SDF2-206ENST00000587788 C1orf141Q5JVX7 400 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 PRPF38BQ5VTL8 546 aaKnown RBP7.2□□□□□ -1.26
SDF2-206ENST00000587788 ADGRD1Q6QNK2 874 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 SAMD7Q7Z3H4 446 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 ITPRIPQ8IWB1 547 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 SYTL4Q96C24 671 aaPredicted RBP7.2□□□□□ -1.26
SDF2-206ENST00000587788 BCL2L13Q9BXK5 485 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 API5Q9BZZ5 524 aaKnown RBP7.2□□□□□ -1.26
SDF2-206ENST00000587788 C4BP0C0L5 1744 aa7.2□□□□□ -1.26
SDF2-206ENST00000587788 CICQ96RK0 1608 aaPredicted RBP7.19□□□□□ -1.26
SDF2-206ENST00000587788 MRC1P22897 1456 aa7.19□□□□□ -1.26
SDF2-206ENST00000587788 C4AP0C0L4 1744 aa7.19□□□□□ -1.26
SDF2-206ENST00000587788 MYH14Q7Z406 1995 aaKnown RBP7.19□□□□□ -1.26
SDF2-206ENST00000587788 VAMP4O75379 141 aa7.19□□□□□ -1.26
SDF2-206ENST00000587788 TXNRD1Q16881 649 aa7.19□□□□□ -1.26
SDF2-206ENST00000587788 TMEM259Q4ZIN3 620 aa7.19□□□□□ -1.26
SDF2-206ENST00000587788 MRPL50Q8N5N7 158 aaKnown RBP7.19□□□□□ -1.26
SDF2-206ENST00000587788 ZFRQ96KR1 1074 aaKnown RBP7.19□□□□□ -1.26
SDF2-206ENST00000587788 LRRC4BQ9NT99 713 aa7.19□□□□□ -1.26
SDF2-206ENST00000587788 ZBTB40Q9NUA8 1239 aa7.19□□□□□ -1.26
SDF2-206ENST00000587788 SOS1Q07889 1333 aaPredicted RBP7.19□□□□□ -1.26
SDF2-206ENST00000587788 BECN1Q14457 450 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 ZNF530Q6P9A1 599 aaPredicted RBP7.18□□□□□ -1.26
SDF2-206ENST00000587788 SMC5Q8IY18 1101 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 IFNL2Q8IZJ0 200 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 IL17REQ8NFR9 667 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 GCC1Q96CN9 775 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 PDGFDQ9GZP0 370 aaPredicted RBP7.18□□□□□ -1.26
SDF2-206ENST00000587788 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 PCDHGC3Q9UN70 934 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 PDZRN3Q9UPQ7 1066 aa7.18□□□□□ -1.26
SDF2-206ENST00000587788 LAS1LQ9Y4W2 734 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms