RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 LRRC24Q50LG9 513 aa24.22■■□□□ 1.47
TRIM47-204ENST00000587339 TAF7LQ5H9L4 462 aa24.22■■□□□ 1.47
TRIM47-204ENST00000587339 FBXO3Q9UK99 471 aa24.22■■□□□ 1.47
TRIM47-204ENST00000587339 RTCBQ9Y3I0 505 aaKnown RBP24.22■■□□□ 1.47
TRIM47-204ENST00000587339 BCORQ6W2J9 1755 aa24.22■■□□□ 1.47
TRIM47-204ENST00000587339 CHMLP26374 656 aa24.22■■□□□ 1.47
TRIM47-204ENST00000587339 EP400Q96L91 3159 aa24.21■■□□□ 1.47
TRIM47-204ENST00000587339 RGL2O15211 777 aa24.21■■□□□ 1.47
TRIM47-204ENST00000587339 REC8O95072 547 aa24.21■■□□□ 1.47
TRIM47-204ENST00000587339 GREM2Q9H772 168 aa24.21■■□□□ 1.47
TRIM47-204ENST00000587339 ITGA6P23229 1130 aa24.2■■□□□ 1.46
TRIM47-204ENST00000587339 DBNLQ9UJU6 430 aaKnown RBP24.2■■□□□ 1.46
TRIM47-204ENST00000587339 SMIM5Q71RC9 77 aa24.2■■□□□ 1.46
TRIM47-204ENST00000587339 ERICH6Q7L0X2 663 aa24.2■■□□□ 1.46
TRIM47-204ENST00000587339 PUS3Q9BZE2 481 aaKnown RBP24.2■■□□□ 1.46
TRIM47-204ENST00000587339 GPR108Q9NPR9 543 aa24.2■■□□□ 1.46
TRIM47-204ENST00000587339 ANKRD18BA2A2Z9 1011 aa24.19■■□□□ 1.46
TRIM47-204ENST00000587339 TRIM37O94972 964 aa24.19■■□□□ 1.46
TRIM47-204ENST00000587339 NTSR2O95665 410 aa24.19■■□□□ 1.46
TRIM47-204ENST00000587339 NARFQ9UHQ1 456 aa24.19■■□□□ 1.46
TRIM47-204ENST00000587339 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
TRIM47-204ENST00000587339 HSP90B1P14625 803 aaKnown RBP24.18■■□□□ 1.46
TRIM47-204ENST00000587339 ESYT1Q9BSJ8 1104 aa24.18■■□□□ 1.46
TRIM47-204ENST00000587339 MYH3P11055 1940 aa24.18■■□□□ 1.46
TRIM47-204ENST00000587339 ZPR1O75312 459 aa24.18■■□□□ 1.46
TRIM47-204ENST00000587339 HCLS1P14317 486 aaPredicted RBP24.18■■□□□ 1.46
TRIM47-204ENST00000587339 USP26Q9BXU7 913 aa24.18■■□□□ 1.46
TRIM47-204ENST00000587339 CEP126Q9P2H0 1117 aa24.18■■□□□ 1.46
TRIM47-204ENST00000587339 BECN1Q14457 450 aa24.17■■□□□ 1.46
TRIM47-204ENST00000587339 USPL1Q5W0Q7 1092 aa24.17■■□□□ 1.46
TRIM47-204ENST00000587339 LRRC4BQ9NT99 713 aa24.17■■□□□ 1.46
TRIM47-204ENST00000587339 C4BP0C0L5 1744 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 EVI5LQ96CN4 794 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 DBNDD2Q9BQY9 259 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 SCN7AQ01118 1682 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 SLC4A3P48751 1232 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 LDHAL6AQ6ZMR3 332 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 NEUROD6Q96NK8 337 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 BOLA2Q9H3K6 86 aa24.16■■□□□ 1.46
TRIM47-204ENST00000587339 AK9Q5TCS8 1911 aa24.15■■□□□ 1.46
TRIM47-204ENST00000587339 ATP5JP18859 108 aa24.15■■□□□ 1.46
TRIM47-204ENST00000587339 SLC27A3Q5K4L6 730 aa24.15■■□□□ 1.46
TRIM47-204ENST00000587339 ARHGEF1Q92888 912 aaKnown RBP24.15■■□□□ 1.46
TRIM47-204ENST00000587339 BCL2L12Q9HB09 334 aa24.15■■□□□ 1.46
TRIM47-204ENST00000587339 AMIGO3Q86WK7 504 aa24.14■■□□□ 1.46
TRIM47-204ENST00000587339 SRP68Q9UHB9 627 aaKnown RBP24.14■■□□□ 1.46
TRIM47-204ENST00000587339 RXRBP28702 533 aa24.14■■□□□ 1.45
TRIM47-204ENST00000587339 TIMM10P62072 90 aa24.14■■□□□ 1.45
TRIM47-204ENST00000587339 TBC1D9BQ66K14 1250 aa24.14■■□□□ 1.45
TRIM47-204ENST00000587339 BICDL1Q6ZP65 573 aa24.14■■□□□ 1.45
TRIM47-204ENST00000587339 A0A1B0GUL7 405 aa24.13■■□□□ 1.45
TRIM47-204ENST00000587339 TRAPPC3LQ5T215 181 aa24.13■■□□□ 1.45
TRIM47-204ENST00000587339 AKAP2Q9Y2D5 859 aa24.13■■□□□ 1.45
TRIM47-204ENST00000587339 ZNF609O15014 1411 aa24.13■■□□□ 1.45
TRIM47-204ENST00000587339 PHF14O94880 888 aa24.12■■□□□ 1.45
TRIM47-204ENST00000587339 CNNM1Q9NRU3 951 aa24.12■■□□□ 1.45
TRIM47-204ENST00000587339 RIPOR2Q9Y4F9 1068 aa24.12■■□□□ 1.45
TRIM47-204ENST00000587339 RFC4P35249 363 aa24.12■■□□□ 1.45
TRIM47-204ENST00000587339 KIF2CQ99661 725 aa24.12■■□□□ 1.45
TRIM47-204ENST00000587339 CCDC152Q4G0S7 254 aa24.11■■□□□ 1.45
TRIM47-204ENST00000587339 SETDB2Q96T68 719 aa24.11■■□□□ 1.45
TRIM47-204ENST00000587339 DIAPH3Q9NSV4 1193 aa24.11■■□□□ 1.45
TRIM47-204ENST00000587339 METTL24Q5JXM2 366 aa24.1■■□□□ 1.45
TRIM47-204ENST00000587339 ANO2Q9NQ90 1003 aa24.1■■□□□ 1.45
TRIM47-204ENST00000587339 DDX60Q8IY21 1712 aaKnown RBP24.1■■□□□ 1.45
TRIM47-204ENST00000587339 ADRA2BP18089 450 aa24.09■■□□□ 1.45
TRIM47-204ENST00000587339 GTF2E1P29083 439 aaPredicted RBP24.09■■□□□ 1.45
TRIM47-204ENST00000587339 ERFEQ4G0M1 354 aa24.09■■□□□ 1.45
TRIM47-204ENST00000587339 CWC27Q6UX04 472 aaKnown RBP24.09■■□□□ 1.45
TRIM47-204ENST00000587339 SGSM2O43147 1006 aa24.08■■□□□ 1.45
TRIM47-204ENST00000587339 RUFY2Q8WXA3 655 aa24.08■■□□□ 1.45
TRIM47-204ENST00000587339 TBC1D2Q9BYX2 928 aa24.08■■□□□ 1.45
TRIM47-204ENST00000587339 NYXQ9GZU5 481 aa24.08■■□□□ 1.45
TRIM47-204ENST00000587339 LAMB2P55268 1798 aa24.08■■□□□ 1.45
TRIM47-204ENST00000587339 RIC1Q4ADV7 1423 aa24.08■■□□□ 1.45
TRIM47-204ENST00000587339 HIP1O00291 1037 aa24.08■■□□□ 1.44
TRIM47-204ENST00000587339 IL25Q9H293 177 aa24.08■■□□□ 1.44
TRIM47-204ENST00000587339 HAUS7Q99871 368 aa24.07■■□□□ 1.44
TRIM47-204ENST00000587339 FSD1Q9BTV5 496 aa24.07■■□□□ 1.44
TRIM47-204ENST00000587339 RTL9Q8NET4 1388 aa24.07■■□□□ 1.44
TRIM47-204ENST00000587339 HMGB2P26583 209 aaKnown RBP24.06■■□□□ 1.44
TRIM47-204ENST00000587339 DNAJC2Q99543 621 aaKnown RBP24.06■■□□□ 1.44
TRIM47-204ENST00000587339 SEC31BQ9NQW1 1179 aa24.06■■□□□ 1.44
TRIM47-204ENST00000587339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.06■■□□□ 1.44
TRIM47-204ENST00000587339 TXNRD1Q16881 649 aa24.06■■□□□ 1.44
TRIM47-204ENST00000587339 NBPF5PQ86XG9 351 aaPredicted RBP24.06■■□□□ 1.44
TRIM47-204ENST00000587339 MPHOSPH8Q99549 860 aa24.06■■□□□ 1.44
TRIM47-204ENST00000587339 C4AP0C0L4 1744 aa24.05■■□□□ 1.44
TRIM47-204ENST00000587339 EPB41L2O43491 1005 aaKnown RBP24.05■■□□□ 1.44
TRIM47-204ENST00000587339 GORABQ5T7V8 394 aa24.05■■□□□ 1.44
TRIM47-204ENST00000587339 XAGE2Q96GT9 111 aa24.05■■□□□ 1.44
TRIM47-204ENST00000587339 LRP5O75197 1615 aa24.05■■□□□ 1.44
TRIM47-204ENST00000587339 PDE8BO95263 885 aa24.04■■□□□ 1.44
TRIM47-204ENST00000587339 ATP2B3Q16720 1220 aa24.04■■□□□ 1.44
TRIM47-204ENST00000587339 CCDC158Q5M9N0 1113 aa24.04■■□□□ 1.44
TRIM47-204ENST00000587339 TPTE2Q6XPS3 522 aa24.04■■□□□ 1.44
TRIM47-204ENST00000587339 VGLL2Q8N8G2 317 aa24.04■■□□□ 1.44
TRIM47-204ENST00000587339 EDC3Q96F86 508 aaKnown RBP24.04■■□□□ 1.44
TRIM47-204ENST00000587339 MROH5Q6ZUA9 1318 aa24.04■■□□□ 1.44
TRIM47-204ENST00000587339 MCCP23508 829 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms