RNA–Protein interactions for RNA: ENST00000586793.6

GFAP-209, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-209ENST00000586793 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
GFAP-209ENST00000586793 BBOX1O75936 387 aa16.59■□□□□ 0.25
GFAP-209ENST00000586793 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
GFAP-209ENST00000586793 PDE8AO60658 829 aa16.58■□□□□ 0.24
GFAP-209ENST00000586793 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.24
GFAP-209ENST00000586793 TMX4Q9H1E5 349 aaPredicted RBP16.58■□□□□ 0.24
GFAP-209ENST00000586793 SEC31BQ9NQW1 1179 aa16.58■□□□□ 0.24
GFAP-209ENST00000586793 CDHR2Q9BYE9 1310 aa16.58■□□□□ 0.24
GFAP-209ENST00000586793 ZNF541Q9H0D2 1346 aa16.58■□□□□ 0.24
GFAP-209ENST00000586793 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
GFAP-209ENST00000586793 COL4A5P29400 1685 aa16.57■□□□□ 0.24
GFAP-209ENST00000586793 HSP90B1P14625 803 aaKnown RBP16.57■□□□□ 0.24
GFAP-209ENST00000586793 GCKRQ14397 625 aa16.57■□□□□ 0.24
GFAP-209ENST00000586793 SP8Q8IXZ3 490 aa16.57■□□□□ 0.24
GFAP-209ENST00000586793 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
GFAP-209ENST00000586793 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
GFAP-209ENST00000586793 CTSWP56202 376 aa16.56■□□□□ 0.24
GFAP-209ENST00000586793 CCDC152Q4G0S7 254 aa16.56■□□□□ 0.24
GFAP-209ENST00000586793 DPP8Q6V1X1 898 aaPredicted RBP16.56■□□□□ 0.24
GFAP-209ENST00000586793 LARGE2Q8N3Y3 721 aa16.56■□□□□ 0.24
GFAP-209ENST00000586793 MRPL50Q8N5N7 158 aaKnown RBP16.56■□□□□ 0.24
GFAP-209ENST00000586793 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
GFAP-209ENST00000586793 TAF1P21675 1872 aa16.56■□□□□ 0.24
GFAP-209ENST00000586793 H7C1W4 665 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 PPIP5K2O43314 1243 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 AOC3Q16853 763 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 GRIPAP1Q4V328 841 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 C16orf71Q8IYS4 520 aaPredicted RBP16.55■□□□□ 0.24
GFAP-209ENST00000586793 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
GFAP-209ENST00000586793 MPNDQ8N594 471 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 SSH1Q8WYL5 1049 aa16.55■□□□□ 0.24
GFAP-209ENST00000586793 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
GFAP-209ENST00000586793 CASP7P55210 303 aa16.54■□□□□ 0.24
GFAP-209ENST00000586793 RPS8P62241 208 aaKnown RBP16.54■□□□□ 0.24
GFAP-209ENST00000586793 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
GFAP-209ENST00000586793 TMC4Q7Z404 712 aa16.54■□□□□ 0.24
GFAP-209ENST00000586793 POTECB2RU33 542 aa16.53■□□□□ 0.24
GFAP-209ENST00000586793 FZD9O00144 591 aa16.53■□□□□ 0.24
GFAP-209ENST00000586793 TOMM70O94826 608 aa16.53■□□□□ 0.24
GFAP-209ENST00000586793 TTLL11Q8NHH1 800 aa16.53■□□□□ 0.24
GFAP-209ENST00000586793 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
GFAP-209ENST00000586793 RTFDC1Q9BY42 306 aaPredicted RBP16.53■□□□□ 0.24
GFAP-209ENST00000586793 GREM2Q9H772 168 aa16.53■□□□□ 0.24
GFAP-209ENST00000586793 DUOX1Q9NRD9 1551 aa16.52■□□□□ 0.24
GFAP-209ENST00000586793 CACNA1FO60840 1977 aa16.52■□□□□ 0.24
GFAP-209ENST00000586793 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
GFAP-209ENST00000586793 GPSM2P81274 684 aa16.52■□□□□ 0.24
GFAP-209ENST00000586793 HNRNPUQ00839 825 aaKnown RBP eCLIP16.52■□□□□ 0.24
GFAP-209ENST00000586793 SUPT20HQ8NEM7 779 aa16.52■□□□□ 0.24
GFAP-209ENST00000586793 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
GFAP-209ENST00000586793 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
GFAP-209ENST00000586793 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
GFAP-209ENST00000586793 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
GFAP-209ENST00000586793 LRRC37AA6NMS7 1700 aa16.5■□□□□ 0.23
GFAP-209ENST00000586793 WDR90Q96KV7 1748 aa16.5■□□□□ 0.23
GFAP-209ENST00000586793 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
GFAP-209ENST00000586793 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
GFAP-209ENST00000586793 RBM46Q8TBY0 533 aaKnown RBP16.5■□□□□ 0.23
GFAP-209ENST00000586793 PLA2G12BQ9BX93 195 aa16.5■□□□□ 0.23
GFAP-209ENST00000586793 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
GFAP-209ENST00000586793 C6orf229H3BNL8 230 aa16.49■□□□□ 0.23
GFAP-209ENST00000586793 EIF6P56537 245 aaKnown RBP16.49■□□□□ 0.23
GFAP-209ENST00000586793 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
GFAP-209ENST00000586793 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
GFAP-209ENST00000586793 L3MBTL3Q96JM7 780 aaPredicted RBP16.49■□□□□ 0.23
GFAP-209ENST00000586793 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
GFAP-209ENST00000586793 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
GFAP-209ENST00000586793 POLLQ9UGP5 575 aa16.49■□□□□ 0.23
GFAP-209ENST00000586793 RTL9Q8NET4 1388 aa16.49■□□□□ 0.23
GFAP-209ENST00000586793 PTPRCP08575 1304 aa16.48■□□□□ 0.23
GFAP-209ENST00000586793 GRM8O00222 908 aa16.48■□□□□ 0.23
GFAP-209ENST00000586793 ALDH1L1O75891 902 aa16.48■□□□□ 0.23
GFAP-209ENST00000586793 RIMBP2O15034 1052 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 UFL1O94874 794 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
GFAP-209ENST00000586793 POTEIP0CG38 1075 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 POTEJP0CG39 1038 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 HSPA6P17066 643 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 ITGA6P23229 1130 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 GPC2Q8N158 579 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 VPS33BQ9H267 617 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 C9orf78Q9NZ63 289 aaPredicted RBP16.47■□□□□ 0.23
GFAP-209ENST00000586793 ANKIB1Q9P2G1 1089 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 ZNRF3Q9ULT6 936 aa16.47■□□□□ 0.23
GFAP-209ENST00000586793 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.23
GFAP-209ENST00000586793 CSF1RP07333 972 aa16.46■□□□□ 0.23
GFAP-209ENST00000586793 FOXO4P98177 505 aa16.46■□□□□ 0.23
GFAP-209ENST00000586793 WASHC4Q2M389 1173 aa16.46■□□□□ 0.23
GFAP-209ENST00000586793 TAF1DQ9H5J8 278 aaPredicted RBP16.46■□□□□ 0.23
GFAP-209ENST00000586793 DBNDD1Q9H9R9 158 aa16.46■□□□□ 0.23
GFAP-209ENST00000586793 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
GFAP-209ENST00000586793 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
GFAP-209ENST00000586793 YDJCA8MPS7 323 aa16.45■□□□□ 0.22
GFAP-209ENST00000586793 RAD17O75943 681 aa16.45■□□□□ 0.22
GFAP-209ENST00000586793 RARSP54136 660 aaKnown RBP16.45■□□□□ 0.22
GFAP-209ENST00000586793 CXCL9Q07325 125 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms