RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 ALG2Q9H553 416 aa8.38□□□□□ -1.07
ZNF540-204ENST00000586792 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
ZNF540-204ENST00000586792 WIZO95785 1651 aa8.37□□□□□ -1.07
ZNF540-204ENST00000586792 DLL1O00548 723 aa8.37□□□□□ -1.07
ZNF540-204ENST00000586792 GP2P55259 537 aaKnown RBP8.37□□□□□ -1.07
ZNF540-204ENST00000586792 FZD5Q13467 585 aa8.37□□□□□ -1.07
ZNF540-204ENST00000586792 PERM1Q5SV97 790 aa8.37□□□□□ -1.07
ZNF540-204ENST00000586792 LCE1DQ5T752 114 aa8.37□□□□□ -1.07
ZNF540-204ENST00000586792 KIAA1324LA8MWY0 1029 aaPredicted RBP8.36□□□□□ -1.07
ZNF540-204ENST00000586792 WWC1Q8IX03 1113 aa8.36□□□□□ -1.07
ZNF540-204ENST00000586792 LARGE2Q8N3Y3 721 aa8.36□□□□□ -1.07
ZNF540-204ENST00000586792 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
ZNF540-204ENST00000586792 KRTAP4-7Q9BYR0 210 aa8.36□□□□□ -1.07
ZNF540-204ENST00000586792 C11orf16Q9NQ32 467 aa8.36□□□□□ -1.07
ZNF540-204ENST00000586792 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
ZNF540-204ENST00000586792 ERCC6Q03468 1493 aa8.36□□□□□ -1.07
ZNF540-204ENST00000586792 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
ZNF540-204ENST00000586792 PALM3A6NDB9 673 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-204ENST00000586792 TGFBR3LH3BV60 316 aa8.35□□□□□ -1.07
ZNF540-204ENST00000586792 DEAF1O75398 565 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-204ENST00000586792 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
ZNF540-204ENST00000586792 C2orf49Q9BVC5 232 aaPredicted RBP8.35□□□□□ -1.07
ZNF540-204ENST00000586792 SRA1Q9HD15 236 aaKnown RBP8.35□□□□□ -1.07
ZNF540-204ENST00000586792 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
ZNF540-204ENST00000586792 IGLV1-40P01703 118 aa8.34□□□□□ -1.07
ZNF540-204ENST00000586792 PLEKHM2Q8IWE5 1019 aa8.34□□□□□ -1.07
ZNF540-204ENST00000586792 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
ZNF540-204ENST00000586792 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
ZNF540-204ENST00000586792 F8W735 103 aaPredicted RBP8.33□□□□□ -1.08
ZNF540-204ENST00000586792 CLDN10P78369 228 aa8.33□□□□□ -1.08
ZNF540-204ENST00000586792 GPLD1P80108 840 aa8.33□□□□□ -1.08
ZNF540-204ENST00000586792 RTN1Q16799 776 aa8.33□□□□□ -1.08
ZNF540-204ENST00000586792 INTS5Q6P9B9 1019 aaKnown RBP8.33□□□□□ -1.08
ZNF540-204ENST00000586792 NGLY1Q96IV0 654 aa8.33□□□□□ -1.08
ZNF540-204ENST00000586792 LAMC3Q9Y6N6 1575 aa8.32□□□□□ -1.08
ZNF540-204ENST00000586792 RSF1Q96T23 1441 aaPredicted RBP8.32□□□□□ -1.08
ZNF540-204ENST00000586792 C21orf2O43822 256 aa8.32□□□□□ -1.08
ZNF540-204ENST00000586792 ALX3O95076 343 aa8.32□□□□□ -1.08
ZNF540-204ENST00000586792 GRIK1P39086 918 aa8.32□□□□□ -1.08
ZNF540-204ENST00000586792 MAP4K3Q8IVH8 894 aa8.32□□□□□ -1.08
ZNF540-204ENST00000586792 TSEN2Q8NCE0 465 aaKnown RBP8.32□□□□□ -1.08
ZNF540-204ENST00000586792 SMG9Q9H0W8 520 aaKnown RBP8.32□□□□□ -1.08
ZNF540-204ENST00000586792 STOML1Q9UBI4 398 aa8.32□□□□□ -1.08
ZNF540-204ENST00000586792 SIX5Q8N196 739 aa8.31□□□□□ -1.08
ZNF540-204ENST00000586792 OGFOD1Q8N543 542 aa8.31□□□□□ -1.08
ZNF540-204ENST00000586792 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
ZNF540-204ENST00000586792 TOP2AP11388 1531 aaKnown RBP8.3□□□□□ -1.08
ZNF540-204ENST00000586792 MED26O95402 600 aa8.3□□□□□ -1.08
ZNF540-204ENST00000586792 RARAP10276 462 aa8.3□□□□□ -1.08
ZNF540-204ENST00000586792 PLAURQ03405 335 aa8.3□□□□□ -1.08
ZNF540-204ENST00000586792 Q6ZS46 218 aa8.3□□□□□ -1.08
ZNF540-204ENST00000586792 CHMP7Q8WUX9 453 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-204ENST00000586792 ZFATQ9P243 1243 aa8.3□□□□□ -1.08
ZNF540-204ENST00000586792 USP17L3A6NCW0 530 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 USP17L4A6NCW7 530 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 TGFB1P01137 390 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 GLB1P16278 677 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 NRLP54845 237 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 MLLT1Q03111 559 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-204ENST00000586792 USP17L2Q6R6M4 530 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 USP17L1Q7RTZ2 530 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 KRT25Q7Z3Z0 450 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 SCG3Q8WXD2 468 aaKnown RBP8.29□□□□□ -1.08
ZNF540-204ENST00000586792 NESP48681 1621 aa8.29□□□□□ -1.08
ZNF540-204ENST00000586792 DHX15O43143 795 aaKnown RBP8.28□□□□□ -1.08
ZNF540-204ENST00000586792 EIF2AK2P19525 551 aaKnown RBP8.28□□□□□ -1.08
ZNF540-204ENST00000586792 TARSP26639 723 aaKnown RBP8.28□□□□□ -1.08
ZNF540-204ENST00000586792 INPP5BP32019 993 aa8.28□□□□□ -1.08
ZNF540-204ENST00000586792 IFT43Q96FT9 208 aa8.28□□□□□ -1.08
ZNF540-204ENST00000586792 IDH3AP50213 366 aa8.27□□□□□ -1.09
ZNF540-204ENST00000586792 CACTIN-AS1Q8N1I8 211 aa8.27□□□□□ -1.09
ZNF540-204ENST00000586792 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
ZNF540-204ENST00000586792 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
ZNF540-204ENST00000586792 SASH3O75995 380 aa8.26□□□□□ -1.09
ZNF540-204ENST00000586792 ARSDP51689 593 aa8.26□□□□□ -1.09
ZNF540-204ENST00000586792 IL22RA1Q8N6P7 574 aa8.26□□□□□ -1.09
ZNF540-204ENST00000586792 MUC3BQ9H195 1237 aa8.26□□□□□ -1.09
ZNF540-204ENST00000586792 RBSNQ9H1K0 784 aa8.26□□□□□ -1.09
ZNF540-204ENST00000586792 COG6Q9Y2V7 657 aa8.26□□□□□ -1.09
ZNF540-204ENST00000586792 PDS5BQ9NTI5 1447 aa8.26□□□□□ -1.09
ZNF540-204ENST00000586792 KIF21AQ7Z4S6 1674 aa8.25□□□□□ -1.09
ZNF540-204ENST00000586792 WNT11O96014 354 aa8.25□□□□□ -1.09
ZNF540-204ENST00000586792 GRNP28799 593 aaKnown RBP8.25□□□□□ -1.09
ZNF540-204ENST00000586792 MCM6Q14566 821 aa8.25□□□□□ -1.09
ZNF540-204ENST00000586792 HFE2Q6ZVN8 426 aa8.25□□□□□ -1.09
ZNF540-204ENST00000586792 PLD4Q96BZ4 506 aa8.25□□□□□ -1.09
ZNF540-204ENST00000586792 CEP41Q9BYV8 373 aa8.25□□□□□ -1.09
ZNF540-204ENST00000586792 CUX2O14529 1486 aa8.25□□□□□ -1.09
ZNF540-204ENST00000586792 GHRHP01286 108 aa8.24□□□□□ -1.09
ZNF540-204ENST00000586792 SPINK2P20155 84 aa8.24□□□□□ -1.09
ZNF540-204ENST00000586792 NFIAQ12857 509 aa8.24□□□□□ -1.09
ZNF540-204ENST00000586792 SETDB1Q15047 1291 aa8.24□□□□□ -1.09
ZNF540-204ENST00000586792 GDF6Q6KF10 455 aaPredicted RBP8.24□□□□□ -1.09
ZNF540-204ENST00000586792 ZDHHC13Q8IUH4 622 aa8.24□□□□□ -1.09
ZNF540-204ENST00000586792 ZNF594Q96JF6 807 aaPredicted RBP8.24□□□□□ -1.09
ZNF540-204ENST00000586792 TLR7Q9NYK1 1049 aaKnown RBP8.24□□□□□ -1.09
ZNF540-204ENST00000586792 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
ZNF540-204ENST00000586792 LOC102724428A0A0B4J2F2 783 aa8.23□□□□□ -1.09
ZNF540-204ENST00000586792 ATP9BO43861 1147 aa8.23□□□□□ -1.09
ZNF540-204ENST00000586792 SEC13P55735 322 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms