RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 GOLGA2Q08379 1002 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 PHAXQ9H814 394 aaKnown RBP12.86□□□□□ -0.35
LAMA3-205ENST00000586709 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
LAMA3-205ENST00000586709 KIF3CO14782 793 aa12.85□□□□□ -0.35
LAMA3-205ENST00000586709 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
LAMA3-205ENST00000586709 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
LAMA3-205ENST00000586709 TRMT112Q9UI30 125 aaKnown RBP12.85□□□□□ -0.35
LAMA3-205ENST00000586709 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
LAMA3-205ENST00000586709 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
LAMA3-205ENST00000586709 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
LAMA3-205ENST00000586709 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
LAMA3-205ENST00000586709 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
LAMA3-205ENST00000586709 NMRK2Q9NPI5 230 aa12.84□□□□□ -0.35
LAMA3-205ENST00000586709 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
LAMA3-205ENST00000586709 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
LAMA3-205ENST00000586709 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
LAMA3-205ENST00000586709 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.36
LAMA3-205ENST00000586709 HCLS1P14317 486 aaPredicted RBP12.83□□□□□ -0.36
LAMA3-205ENST00000586709 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
LAMA3-205ENST00000586709 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
LAMA3-205ENST00000586709 TRIM28Q13263 835 aaKnown RBP12.83□□□□□ -0.36
LAMA3-205ENST00000586709 OLFM4Q6UX06 510 aa12.83□□□□□ -0.36
LAMA3-205ENST00000586709 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
LAMA3-205ENST00000586709 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
LAMA3-205ENST00000586709 STK31Q9BXU1 1019 aa12.83□□□□□ -0.36
LAMA3-205ENST00000586709 GLTPD2A6NH11 291 aa12.82□□□□□ -0.36
LAMA3-205ENST00000586709 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
LAMA3-205ENST00000586709 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
LAMA3-205ENST00000586709 SCN4AP35499 1836 aa12.82□□□□□ -0.36
LAMA3-205ENST00000586709 ABCC4O15439 1325 aa12.82□□□□□ -0.36
LAMA3-205ENST00000586709 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
LAMA3-205ENST00000586709 TCERG1O14776 1098 aaKnown RBP12.81□□□□□ -0.36
LAMA3-205ENST00000586709 PPEF1O14829 653 aaPredicted RBP12.81□□□□□ -0.36
LAMA3-205ENST00000586709 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
LAMA3-205ENST00000586709 MYD88Q99836 296 aa12.81□□□□□ -0.36
LAMA3-205ENST00000586709 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
LAMA3-205ENST00000586709 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
LAMA3-205ENST00000586709 CCDC191Q8NCU4 936 aa12.8□□□□□ -0.36
LAMA3-205ENST00000586709 PSMD1Q99460 953 aa12.8□□□□□ -0.36
LAMA3-205ENST00000586709 METTL22Q9BUU2 404 aaPredicted RBP12.8□□□□□ -0.36
LAMA3-205ENST00000586709 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
LAMA3-205ENST00000586709 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
LAMA3-205ENST00000586709 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
LAMA3-205ENST00000586709 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
LAMA3-205ENST00000586709 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 VAMP4O75379 141 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 TOMM70O94826 608 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 KSR2Q6VAB6 950 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
LAMA3-205ENST00000586709 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
LAMA3-205ENST00000586709 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 ZBTB38Q8NAP3 1195 aaPredicted RBP12.79□□□□□ -0.36
LAMA3-205ENST00000586709 MAP3K2Q9Y2U5 619 aa12.79□□□□□ -0.36
LAMA3-205ENST00000586709 COL4A1P02462 1669 aa12.78□□□□□ -0.36
LAMA3-205ENST00000586709 IRS4O14654 1257 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-205ENST00000586709 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
LAMA3-205ENST00000586709 GRAPQ13588 217 aa12.78□□□□□ -0.36
LAMA3-205ENST00000586709 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-205ENST00000586709 G2E3Q7L622 706 aa12.78□□□□□ -0.36
LAMA3-205ENST00000586709 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
LAMA3-205ENST00000586709 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-205ENST00000586709 TMX4Q9H1E5 349 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-205ENST00000586709 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-205ENST00000586709 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
LAMA3-205ENST00000586709 COL4A5P29400 1685 aa12.77□□□□□ -0.36
LAMA3-205ENST00000586709 LTBP1Q14766 1721 aa12.77□□□□□ -0.36
LAMA3-205ENST00000586709 BBOX1O75936 387 aa12.77□□□□□ -0.37
LAMA3-205ENST00000586709 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
LAMA3-205ENST00000586709 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
LAMA3-205ENST00000586709 NEXNQ0ZGT2 675 aa12.77□□□□□ -0.37
LAMA3-205ENST00000586709 FLIIQ13045 1269 aa12.77□□□□□ -0.37
LAMA3-205ENST00000586709 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
LAMA3-205ENST00000586709 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
LAMA3-205ENST00000586709 TSPYL2Q9H2G4 693 aaPredicted RBP12.77□□□□□ -0.37
LAMA3-205ENST00000586709 PCNTO95613 3336 aa12.77□□□□□ -0.37
LAMA3-205ENST00000586709 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
LAMA3-205ENST00000586709 VEGFAP15692 232 aaPredicted RBP12.76□□□□□ -0.37
LAMA3-205ENST00000586709 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
LAMA3-205ENST00000586709 DUOX1Q9NRD9 1551 aa12.76□□□□□ -0.37
LAMA3-205ENST00000586709 DDNO94850 711 aaPredicted RBP12.75□□□□□ -0.37
LAMA3-205ENST00000586709 HSPA6P17066 643 aa12.75□□□□□ -0.37
LAMA3-205ENST00000586709 FKBP5Q13451 457 aaPredicted RBP12.75□□□□□ -0.37
LAMA3-205ENST00000586709 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
LAMA3-205ENST00000586709 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
LAMA3-205ENST00000586709 ZNF541Q9H0D2 1346 aa12.74□□□□□ -0.37
LAMA3-205ENST00000586709 NEURL1BA8MQ27 555 aa12.74□□□□□ -0.37
LAMA3-205ENST00000586709 POTECB2RU33 542 aa12.74□□□□□ -0.37
LAMA3-205ENST00000586709 FZD9O00144 591 aa12.74□□□□□ -0.37
LAMA3-205ENST00000586709 PDE8AO60658 829 aa12.74□□□□□ -0.37
LAMA3-205ENST00000586709 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
LAMA3-205ENST00000586709 DPP8Q6V1X1 898 aaPredicted RBP12.74□□□□□ -0.37
LAMA3-205ENST00000586709 SUPT20HQ8NEM7 779 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms