RNA–Protein interactions for RNA: ENST00000586574.5

GIT1-215, Transcript of GIT ArfGAP 1, human

TSL 4

Gene GIT1, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIT1-215	ENST00000586574	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14.05	□□□□□ -0.16
GIT1-215	ENST00000586574	COPS6	Q7L5N1	327 aa		14.05	□□□□□ -0.16
GIT1-215	ENST00000586574	MPND	Q8N594	471 aa		14.05	□□□□□ -0.16
GIT1-215	ENST00000586574	SUPT20H	Q8NEM7	779 aa		14.05	□□□□□ -0.16
GIT1-215	ENST00000586574	TRPM4	Q8TD43	1214 aa		14.05	□□□□□ -0.16
GIT1-215	ENST00000586574	HHIPL1	Q96JK4	782 aa		14.05	□□□□□ -0.16
GIT1-215	ENST00000586574	ANKRD36C	Q5JPF3	1778 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	TAF1	P21675	1872 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	RAD17	O75943	681 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	TCIRG1	Q13488	830 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	GRAP	Q13588	217 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	FAM161A	Q3B820	660 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	DLK2	Q6UY11	383 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	GRAPL	Q8TC17	118 aa	Predicted RBP	14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	XAGE3	Q8WTP9	111 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	ZC3H15	Q8WU90	426 aa	Known RBP	14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	ZIC5	Q96T25	663 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	BABAM1	Q9NWV8	329 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	CDHR2	Q9BYE9	1310 aa		14.04	□□□□□ -0.16
GIT1-215	ENST00000586574	RIPK4	P57078	832 aa		14.03	□□□□□ -0.16
GIT1-215	ENST00000586574	KRT24	Q2M2I5	525 aa		14.03	□□□□□ -0.16
GIT1-215	ENST00000586574	COL4A1	P02462	1669 aa		14.02	□□□□□ -0.16
GIT1-215	ENST00000586574	MAPK8IP3	Q9UPT6	1336 aa		14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	SLC34A2	O95436	690 aa		14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	AIMP1	Q12904	312 aa	Known RBP	14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	HSP90AB3P	Q58FF7	597 aa		14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	CDC37L1	Q7L3B6	337 aa		14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	NECTIN2	Q92692	538 aa		14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	BEGAIN	Q9BUH8	593 aa		14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	TMX4	Q9H1E5	349 aa	Predicted RBP	14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	PNN	Q9H307	717 aa	Known RBP	14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	TRMT112	Q9UI30	125 aa	Known RBP	14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	CNOT7	Q9UIV1	285 aa	Known RBP	14.02	□□□□□ -0.17
GIT1-215	ENST00000586574	SH3TC1	Q8TE82	1336 aa		14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	CCDC85C	A6NKD9	419 aa		14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	TMPO	P42166	694 aa	Known RBP	14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	BRPF1	P55201	1214 aa	Predicted RBP	14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	TNIP1	Q15025	636 aa		14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	DDX46	Q7L014	1031 aa	Known RBP	14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	BCL2L13	Q9BXK5	485 aa		14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	ZBTB12	Q9Y330	459 aa	Predicted RBP	14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	LRRC37A	A6NMS7	1700 aa		14.01	□□□□□ -0.17
GIT1-215	ENST00000586574	CHL1	O00533	1208 aa		14	□□□□□ -0.17
GIT1-215	ENST00000586574	EGFR	P00533	1210 aa		14	□□□□□ -0.17
GIT1-215	ENST00000586574	CELF1	Q92879	486 aa	Known RBP	14	□□□□□ -0.17
GIT1-215	ENST00000586574	ZNF428	Q96B54	188 aa		14	□□□□□ -0.17
GIT1-215	ENST00000586574	MCOLN1	Q9GZU1	580 aa		14	□□□□□ -0.17
GIT1-215	ENST00000586574	KCNQ5	Q9NR82	932 aa		14	□□□□□ -0.17
GIT1-215	ENST00000586574	CASP8AP2	Q9UKL3	1982 aa		14	□□□□□ -0.17
GIT1-215	ENST00000586574	CA12	O43570	354 aa		13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	SF3B3	Q15393	1217 aa	Known RBP	13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	SAMD7	Q7Z3H4	446 aa		13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	USP48	Q86UV5	1035 aa		13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	MICALL2	Q8IY33	904 aa		13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	DPF2	Q92785	391 aa		13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	ISCA1	Q9BUE6	129 aa		13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	ZNF408	Q9H9D4	720 aa		13.99	□□□□□ -0.17
GIT1-215	ENST00000586574	DDX60	Q8IY21	1712 aa	Known RBP	13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	FAM155A	B1AL88	458 aa	Predicted RBP	13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	PSMD14	O00487	310 aa		13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	MLLT1	Q03111	559 aa	Predicted RBP	13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	TMC4	Q7Z404	712 aa		13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	FAM89A	Q96GI7	184 aa		13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	CHPF2	Q9P2E5	772 aa		13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	POLL	Q9UGP5	575 aa		13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	TRIM35	Q9UPQ4	493 aa		13.98	□□□□□ -0.17
GIT1-215	ENST00000586574	RTL9	Q8NET4	1388 aa		13.97	□□□□□ -0.17
GIT1-215	ENST00000586574		H7C1D1	291 aa		13.97	□□□□□ -0.17
GIT1-215	ENST00000586574	WASHC4	Q2M389	1173 aa		13.97	□□□□□ -0.17
GIT1-215	ENST00000586574	PLBD2	Q8NHP8	589 aa		13.97	□□□□□ -0.17
GIT1-215	ENST00000586574	DBNDD1	Q9H9R9	158 aa		13.97	□□□□□ -0.17
GIT1-215	ENST00000586574	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.97	□□□□□ -0.17
GIT1-215	ENST00000586574	POLR2A	P24928	1970 aa	Known RBP	13.96	□□□□□ -0.17
GIT1-215	ENST00000586574	RIMBP2	O15034	1052 aa		13.96	□□□□□ -0.17
GIT1-215	ENST00000586574	HUNK	P57058	714 aa		13.96	□□□□□ -0.17
GIT1-215	ENST00000586574	GPSM2	P81274	684 aa		13.96	□□□□□ -0.17
GIT1-215	ENST00000586574	NOG	Q13253	232 aa		13.96	□□□□□ -0.17
GIT1-215	ENST00000586574	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.96	□□□□□ -0.17
GIT1-215	ENST00000586574	ANKRD13D	Q6ZTN6	518 aa		13.96	□□□□□ -0.17
GIT1-215	ENST00000586574	ATP5J2-PTCD1	G3V325	749 aa		13.95	□□□□□ -0.18
GIT1-215	ENST00000586574	TRIM28	Q13263	835 aa	Known RBP	13.95	□□□□□ -0.18
GIT1-215	ENST00000586574	ADM5	C9JUS6	153 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	LMOD3	Q0VAK6	560 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	DGKZ	Q13574	1117 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	NEUROD2	Q15784	382 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	DOK7	Q18PE1	504 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	RGMB	Q6NW40	437 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	KRT26	Q7Z3Y9	468 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	TBC1D16	Q8TBP0	767 aa		13.94	□□□□□ -0.18
GIT1-215	ENST00000586574	ASTN2	O75129	1339 aa	Predicted RBP	13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	SCN9A	Q15858	1988 aa		13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	C6orf229	H3BNL8	230 aa		13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	ECE2	O60344	883 aa		13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	VIL1	P09327	827 aa	Known RBP	13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	RPS12	P25398	132 aa	Known RBP	13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	RPS8	P62241	208 aa	Known RBP	13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	RTL5	Q5HYW3	569 aa	Predicted RBP	13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	HDGFL1	Q5TGJ6	251 aa		13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	CCDC146	Q8IYE0	955 aa		13.93	□□□□□ -0.18
GIT1-215	ENST00000586574	GBA2	Q9HCG7	927 aa	Predicted RBP	13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms