RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 DPP8Q6V1X1 898 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-225ENST00000586385 SAPCD2Q86UD0 394 aa15.64■□□□□ 0.09
BRCA1-225ENST00000586385 MPNDQ8N594 471 aa15.64■□□□□ 0.09
BRCA1-225ENST00000586385 BABAM1Q9NWV8 329 aa15.64■□□□□ 0.09
BRCA1-225ENST00000586385 COL4A1P02462 1669 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 LAMB2P55268 1798 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 CELF2O95319 508 aaKnown RBP15.63■□□□□ 0.09
BRCA1-225ENST00000586385 ECE1P42892 770 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 AIMP1Q12904 312 aaKnown RBP15.63■□□□□ 0.09
BRCA1-225ENST00000586385 GRM1Q13255 1194 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 GRAPQ13588 217 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 DLK2Q6UY11 383 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 SUPT20HQ8NEM7 779 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 GRAPLQ8TC17 118 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-225ENST00000586385 TSKSQ9UJT2 592 aa15.63■□□□□ 0.09
BRCA1-225ENST00000586385 CIAPIN1Q6FI81 312 aa15.62■□□□□ 0.09
BRCA1-225ENST00000586385 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-225ENST00000586385 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
BRCA1-225ENST00000586385 TRMT112Q9UI30 125 aaKnown RBP15.62■□□□□ 0.09
BRCA1-225ENST00000586385 SH3TC1Q8TE82 1336 aa15.62■□□□□ 0.09
BRCA1-225ENST00000586385 CHL1O00533 1208 aa15.61■□□□□ 0.09
BRCA1-225ENST00000586385 HSP90AB3PQ58FF7 597 aa15.61■□□□□ 0.09
BRCA1-225ENST00000586385 CDHR2Q9BYE9 1310 aa15.61■□□□□ 0.09
BRCA1-225ENST00000586385 TRPM7Q96QT4 1865 aa15.61■□□□□ 0.09
BRCA1-225ENST00000586385 MAP2K2P36507 400 aa15.6■□□□□ 0.09
BRCA1-225ENST00000586385 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
BRCA1-225ENST00000586385 ZIC5Q96T25 663 aa15.6■□□□□ 0.09
BRCA1-225ENST00000586385 CHPF2Q9P2E5 772 aa15.6■□□□□ 0.09
BRCA1-225ENST00000586385 TRIM35Q9UPQ4 493 aa15.6■□□□□ 0.09
BRCA1-225ENST00000586385 ANKRD36CQ5JPF3 1778 aa15.59■□□□□ 0.09
BRCA1-225ENST00000586385 EGFRP00533 1210 aa15.59■□□□□ 0.09
BRCA1-225ENST00000586385 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
BRCA1-225ENST00000586385 ZC3H15Q8WU90 426 aaKnown RBP15.59■□□□□ 0.09
BRCA1-225ENST00000586385 CELF1Q92879 486 aaKnown RBP15.59■□□□□ 0.09
BRCA1-225ENST00000586385 HHIPL1Q96JK4 782 aa15.59■□□□□ 0.09
BRCA1-225ENST00000586385 ISCA1Q9BUE6 129 aa15.59■□□□□ 0.09
BRCA1-225ENST00000586385 TMX4Q9H1E5 349 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-225ENST00000586385 CNOT7Q9UIV1 285 aaKnown RBP15.59■□□□□ 0.09
BRCA1-225ENST00000586385 ZBTB12Q9Y330 459 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-225ENST00000586385 LRRC37AA6NMS7 1700 aa15.59■□□□□ 0.09
BRCA1-225ENST00000586385 TAF1P21675 1872 aa15.59■□□□□ 0.09
BRCA1-225ENST00000586385 TNIP1Q15025 636 aa15.58■□□□□ 0.08
BRCA1-225ENST00000586385 MICALL2Q8IY33 904 aa15.58■□□□□ 0.08
BRCA1-225ENST00000586385 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.08
BRCA1-225ENST00000586385 FAM89AQ96GI7 184 aa15.58■□□□□ 0.08
BRCA1-225ENST00000586385 BCL2L13Q9BXK5 485 aa15.58■□□□□ 0.08
BRCA1-225ENST00000586385 KCNQ5Q9NR82 932 aa15.58■□□□□ 0.08
BRCA1-225ENST00000586385 PSMD14O00487 310 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 SF3B3Q15393 1217 aaKnown RBP15.57■□□□□ 0.08
BRCA1-225ENST00000586385 CDC37L1Q7L3B6 337 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 SAMD7Q7Z3H4 446 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 PLBD2Q8NHP8 589 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 ZNF408Q9H9D4 720 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 POLLQ9UGP5 575 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 RTL9Q8NET4 1388 aa15.57■□□□□ 0.08
BRCA1-225ENST00000586385 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
BRCA1-225ENST00000586385 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-225ENST00000586385 GPSM2P81274 684 aa15.56■□□□□ 0.08
BRCA1-225ENST00000586385 RALBP1Q15311 655 aa15.56■□□□□ 0.08
BRCA1-225ENST00000586385 NEUROD2Q15784 382 aa15.56■□□□□ 0.08
BRCA1-225ENST00000586385 USP48Q86UV5 1035 aa15.56■□□□□ 0.08
BRCA1-225ENST00000586385 BEGAINQ9BUH8 593 aa15.56■□□□□ 0.08
BRCA1-225ENST00000586385 DBNDD1Q9H9R9 158 aa15.56■□□□□ 0.08
BRCA1-225ENST00000586385 DDX60Q8IY21 1712 aaKnown RBP15.56■□□□□ 0.08
BRCA1-225ENST00000586385 RGS19P49795 217 aa15.55■□□□□ 0.08
BRCA1-225ENST00000586385 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
BRCA1-225ENST00000586385 ANKRD13DQ6ZTN6 518 aa15.55■□□□□ 0.08
BRCA1-225ENST00000586385 TMC4Q7Z404 712 aa15.55■□□□□ 0.08
BRCA1-225ENST00000586385 DPF2Q92785 391 aa15.55■□□□□ 0.08
BRCA1-225ENST00000586385 CCDC85CA6NKD9 419 aa15.54■□□□□ 0.08
BRCA1-225ENST00000586385 FAM155AB1AL88 458 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-225ENST00000586385 WASHC4Q2M389 1173 aa15.54■□□□□ 0.08
BRCA1-225ENST00000586385 TBC1D10BQ4KMP7 808 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-225ENST00000586385 MCOLN1Q9GZU1 580 aa15.54■□□□□ 0.08
BRCA1-225ENST00000586385 NSFL1CQ9UNZ2 370 aaKnown RBP15.54■□□□□ 0.08
BRCA1-225ENST00000586385 H7C1D1 291 aa15.53■□□□□ 0.08
BRCA1-225ENST00000586385 RIMBP2O15034 1052 aa15.53■□□□□ 0.08
BRCA1-225ENST00000586385 HOXB7P09629 217 aa15.53■□□□□ 0.08
BRCA1-225ENST00000586385 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-225ENST00000586385 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
BRCA1-225ENST00000586385 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-225ENST00000586385 ADM5C9JUS6 153 aa15.52■□□□□ 0.08
BRCA1-225ENST00000586385 CA12O43570 354 aa15.52■□□□□ 0.08
BRCA1-225ENST00000586385 ECE2O60344 883 aa15.52■□□□□ 0.08
BRCA1-225ENST00000586385 HUNKP57058 714 aa15.52■□□□□ 0.08
BRCA1-225ENST00000586385 TRIM28Q13263 835 aaKnown RBP15.52■□□□□ 0.08
BRCA1-225ENST00000586385 DOK7Q18PE1 504 aa15.52■□□□□ 0.08
BRCA1-225ENST00000586385 TBC1D16Q8TBP0 767 aa15.52■□□□□ 0.08
BRCA1-225ENST00000586385 RUNDC1Q96C34 613 aa15.52■□□□□ 0.08
BRCA1-225ENST00000586385 C6orf229H3BNL8 230 aa15.51■□□□□ 0.07
BRCA1-225ENST00000586385 IRS4O14654 1257 aaPredicted RBP15.51■□□□□ 0.07
BRCA1-225ENST00000586385 SLC34A2O95436 690 aa15.51■□□□□ 0.07
BRCA1-225ENST00000586385 NOGQ13253 232 aa15.51■□□□□ 0.07
BRCA1-225ENST00000586385 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
BRCA1-225ENST00000586385 KRT26Q7Z3Y9 468 aa15.51■□□□□ 0.07
BRCA1-225ENST00000586385 SEC31BQ9NQW1 1179 aa15.51■□□□□ 0.07
BRCA1-225ENST00000586385 DBF4Q9UBU7 674 aaPredicted RBP15.51■□□□□ 0.07
BRCA1-225ENST00000586385 ADAMTS8Q9UP79 889 aa15.51■□□□□ 0.07
BRCA1-225ENST00000586385 MYBBP1AQ9BQG0 1328 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms