RNA–Protein interactions for RNA: ENST00000586177.1

AP3D1-204, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-204ENST00000586177 BBOX1O75936 387 aa21.49■■□□□ 1.03
AP3D1-204ENST00000586177 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
AP3D1-204ENST00000586177 DZIP1LQ8IYY4 767 aaKnown RBP21.49■■□□□ 1.03
AP3D1-204ENST00000586177 GRAPQ13588 217 aa21.48■■□□□ 1.03
AP3D1-204ENST00000586177 GRAPLQ8TC17 118 aaPredicted RBP21.48■■□□□ 1.03
AP3D1-204ENST00000586177 C7orf43Q8WVR3 580 aa21.48■■□□□ 1.03
AP3D1-204ENST00000586177 COL11A2P13942 1736 aaPredicted RBP21.47■■□□□ 1.03
AP3D1-204ENST00000586177 CSF1RP07333 972 aa21.47■■□□□ 1.03
AP3D1-204ENST00000586177 FOXO4P98177 505 aa21.47■■□□□ 1.03
AP3D1-204ENST00000586177 TMEM57Q8N5G2 664 aa21.47■■□□□ 1.03
AP3D1-204ENST00000586177 SEC31BQ9NQW1 1179 aa21.47■■□□□ 1.03
AP3D1-204ENST00000586177 PPEF1O14829 653 aaPredicted RBP21.46■■□□□ 1.03
AP3D1-204ENST00000586177 PLIN1O60240 522 aa21.46■■□□□ 1.03
AP3D1-204ENST00000586177 MS4A1P11836 297 aa21.46■■□□□ 1.03
AP3D1-204ENST00000586177 SOGA3Q5TF21 947 aa21.46■■□□□ 1.03
AP3D1-204ENST00000586177 SUCLG2Q96I99 432 aa21.46■■□□□ 1.03
AP3D1-204ENST00000586177 TMX4Q9H1E5 349 aaPredicted RBP21.46■■□□□ 1.03
AP3D1-204ENST00000586177 RPS8P62241 208 aaKnown RBP21.45■■□□□ 1.02
AP3D1-204ENST00000586177 EPHA10Q5JZY3 1008 aa21.45■■□□□ 1.02
AP3D1-204ENST00000586177 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.45■■□□□ 1.02
AP3D1-204ENST00000586177 CELF1Q92879 486 aaKnown RBP21.45■■□□□ 1.02
AP3D1-204ENST00000586177 GREM2Q9H772 168 aa21.45■■□□□ 1.02
AP3D1-204ENST00000586177 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
AP3D1-204ENST00000586177 DLEC1Q9Y238 1755 aa21.45■■□□□ 1.02
AP3D1-204ENST00000586177 UBTFL1P0CB47 393 aaPredicted RBP21.44■■□□□ 1.02
AP3D1-204ENST00000586177 LMBR1LQ6UX01 489 aa21.44■■□□□ 1.02
AP3D1-204ENST00000586177 OLFM4Q6UX06 510 aa21.44■■□□□ 1.02
AP3D1-204ENST00000586177 KAZALD1Q96I82 304 aa21.44■■□□□ 1.02
AP3D1-204ENST00000586177 HDAC5Q9UQL6 1122 aa21.44■■□□□ 1.02
AP3D1-204ENST00000586177 CHMP3Q9Y3E7 222 aa21.44■■□□□ 1.02
AP3D1-204ENST00000586177 BRCA1P38398 1863 aaKnown RBP21.43■■□□□ 1.02
AP3D1-204ENST00000586177 RLBP1P12271 317 aa21.43■■□□□ 1.02
AP3D1-204ENST00000586177 CCDC93Q567U6 631 aa21.43■■□□□ 1.02
AP3D1-204ENST00000586177 CC2D2BQ6DHV5 1058 aa21.43■■□□□ 1.02
AP3D1-204ENST00000586177 SP8Q8IXZ3 490 aa21.43■■□□□ 1.02
AP3D1-204ENST00000586177 PANK1Q8TE04 598 aa21.43■■□□□ 1.02
AP3D1-204ENST00000586177 ATP6V0A2Q9Y487 856 aa21.43■■□□□ 1.02
AP3D1-204ENST00000586177 GNAI3P08754 354 aa21.42■■□□□ 1.02
AP3D1-204ENST00000586177 ITGA6P23229 1130 aa21.42■■□□□ 1.02
AP3D1-204ENST00000586177 TMC4Q7Z404 712 aa21.42■■□□□ 1.02
AP3D1-204ENST00000586177 ANKRD18AQ8IVF6 992 aa21.42■■□□□ 1.02
AP3D1-204ENST00000586177 SLX4Q8IY92 1834 aa21.42■■□□□ 1.02
AP3D1-204ENST00000586177 RTKN2Q8IZC4 609 aa21.42■■□□□ 1.02
AP3D1-204ENST00000586177 CDC5LQ99459 802 aaKnown RBP21.42■■□□□ 1.02
AP3D1-204ENST00000586177 MEIS3Q99687 375 aa21.42■■□□□ 1.02
AP3D1-204ENST00000586177 BICC1Q9H694 974 aaKnown RBP21.42■■□□□ 1.02
AP3D1-204ENST00000586177 RTL9Q8NET4 1388 aa21.41■■□□□ 1.02
AP3D1-204ENST00000586177 IFIT5Q13325 482 aaKnown RBP21.41■■□□□ 1.02
AP3D1-204ENST00000586177 FAM161AQ3B820 660 aa21.41■■□□□ 1.02
AP3D1-204ENST00000586177 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
AP3D1-204ENST00000586177 ANKRD18BA2A2Z9 1011 aa21.4■■□□□ 1.02
AP3D1-204ENST00000586177 CCDC57Q2TAC2 916 aa21.4■■□□□ 1.02
AP3D1-204ENST00000586177 GRIPAP1Q4V328 841 aa21.4■■□□□ 1.02
AP3D1-204ENST00000586177 LAMB2P55268 1798 aa21.4■■□□□ 1.02
AP3D1-204ENST00000586177 GOLGB1Q14789 3259 aaKnown RBP21.4■■□□□ 1.02
AP3D1-204ENST00000586177 ANKRD44Q8N8A2 993 aa21.39■■□□□ 1.01
AP3D1-204ENST00000586177 NFKBIEO00221 500 aa21.38■■□□□ 1.01
AP3D1-204ENST00000586177 IGHMBP2P38935 993 aaKnown RBP21.38■■□□□ 1.01
AP3D1-204ENST00000586177 RASSF7Q02833 373 aa21.38■■□□□ 1.01
AP3D1-204ENST00000586177 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
AP3D1-204ENST00000586177 RABL6Q3YEC7 729 aaPredicted RBP21.38■■□□□ 1.01
AP3D1-204ENST00000586177 SLC51AQ86UW1 340 aa21.38■■□□□ 1.01
AP3D1-204ENST00000586177 LRRFIP2Q9Y608 721 aaKnown RBP21.38■■□□□ 1.01
AP3D1-204ENST00000586177 ZBTB7BO15156 539 aaPredicted RBP21.37■■□□□ 1.01
AP3D1-204ENST00000586177 TAOK3Q9H2K8 898 aa21.37■■□□□ 1.01
AP3D1-204ENST00000586177 BSDC1Q9NW68 430 aaPredicted RBP21.37■■□□□ 1.01
AP3D1-204ENST00000586177 ARFGEF1Q9Y6D6 1849 aa21.36■■□□□ 1.01
AP3D1-204ENST00000586177 GNAI2P04899 355 aa21.36■■□□□ 1.01
AP3D1-204ENST00000586177 FKBP4Q02790 459 aaKnown RBP eCLIP21.36■■□□□ 1.01
AP3D1-204ENST00000586177 TAF7LQ5H9L4 462 aa21.36■■□□□ 1.01
AP3D1-204ENST00000586177 MPNDQ8N594 471 aa21.36■■□□□ 1.01
AP3D1-204ENST00000586177 MPHOSPH8Q99549 860 aa21.36■■□□□ 1.01
AP3D1-204ENST00000586177 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
AP3D1-204ENST00000586177 C20orf194Q5TEA3 1177 aa21.35■■□□□ 1.01
AP3D1-204ENST00000586177 DPP8Q6V1X1 898 aaPredicted RBP21.35■■□□□ 1.01
AP3D1-204ENST00000586177 NSFL1CQ9UNZ2 370 aaKnown RBP21.35■■□□□ 1.01
AP3D1-204ENST00000586177 LTBP3Q9NS15 1303 aa21.34■■□□□ 1.01
AP3D1-204ENST00000586177 LMNB1P20700 586 aa21.34■■□□□ 1.01
AP3D1-204ENST00000586177 RRP1P56182 461 aaKnown RBP21.34■■□□□ 1.01
AP3D1-204ENST00000586177 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
AP3D1-204ENST00000586177 C9orf131Q5VYM1 1079 aa21.34■■□□□ 1.01
AP3D1-204ENST00000586177 ZNF594Q96JF6 807 aaPredicted RBP21.34■■□□□ 1.01
AP3D1-204ENST00000586177 PSMD1Q99460 953 aa21.34■■□□□ 1.01
AP3D1-204ENST00000586177 GPSM2P81274 684 aa21.33■■□□□ 1.01
AP3D1-204ENST00000586177 MINPP1Q9UNW1 487 aa21.33■■□□□ 1.01
AP3D1-204ENST00000586177 CACNA1SQ13698 1873 aa21.32■■□□□ 1
AP3D1-204ENST00000586177 PRELPP51888 382 aa21.32■■□□□ 1
AP3D1-204ENST00000586177 LDHAL6AQ6ZMR3 332 aa21.32■■□□□ 1
AP3D1-204ENST00000586177 ZNF277Q9NRM2 450 aaPredicted RBP21.32■■□□□ 1
AP3D1-204ENST00000586177 RNF181Q9P0P0 153 aa21.32■■□□□ 1
AP3D1-204ENST00000586177 ANKIB1Q9P2G1 1089 aa21.32■■□□□ 1
AP3D1-204ENST00000586177 DDX19BQ9UMR2 479 aa21.32■■□□□ 1
AP3D1-204ENST00000586177 TAF1P21675 1872 aa21.32■■□□□ 1
AP3D1-204ENST00000586177 COL4A1P02462 1669 aa21.31■■□□□ 1
AP3D1-204ENST00000586177 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
AP3D1-204ENST00000586177 RTFDC1Q9BY42 306 aaPredicted RBP21.31■■□□□ 1
AP3D1-204ENST00000586177 CHMP4BQ9H444 224 aaKnown RBP21.31■■□□□ 1
AP3D1-204ENST00000586177 CNNM1Q9NRU3 951 aa21.31■■□□□ 1
AP3D1-204ENST00000586177 SNED1Q8TER0 1413 aa21.3■■□□□ 1
AP3D1-204ENST00000586177 UTRNP46939 3433 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms