RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 PRR5LQ6MZQ0 368 aa27.93■■■□□ 2.06
LAMA3-204ENST00000585600 TTLL11Q8NHH1 800 aa27.93■■■□□ 2.06
LAMA3-204ENST00000585600 HMMRO75330 724 aa27.92■■■□□ 2.06
LAMA3-204ENST00000585600 CTSWP56202 376 aa27.92■■■□□ 2.06
LAMA3-204ENST00000585600 CNBD1Q8NA66 436 aa27.92■■■□□ 2.06
LAMA3-204ENST00000585600 SLC16A10Q8TF71 515 aa27.92■■■□□ 2.06
LAMA3-204ENST00000585600 C3orf67Q6ZVT6 689 aa27.91■■■□□ 2.06
LAMA3-204ENST00000585600 CCDC85AQ96PX6 553 aaPredicted RBP27.91■■■□□ 2.06
LAMA3-204ENST00000585600 DCTPP1Q9H773 170 aa27.91■■■□□ 2.06
LAMA3-204ENST00000585600 PDZRN3Q9UPQ7 1066 aa27.91■■■□□ 2.06
LAMA3-204ENST00000585600 RFX5P48382 616 aaPredicted RBP27.9■■■□□ 2.06
LAMA3-204ENST00000585600 SMC5Q8IY18 1101 aa27.9■■■□□ 2.06
LAMA3-204ENST00000585600 CHMP3Q9Y3E7 222 aa27.9■■■□□ 2.06
LAMA3-204ENST00000585600 HSP90B1P14625 803 aaKnown RBP27.88■■■□□ 2.05
LAMA3-204ENST00000585600 GREM2Q9H772 168 aa27.88■■■□□ 2.05
LAMA3-204ENST00000585600 NPHP1O15259 732 aa27.88■■■□□ 2.05
LAMA3-204ENST00000585600 KLHDC4Q8TBB5 520 aa27.88■■■□□ 2.05
LAMA3-204ENST00000585600 PA2G4Q9UQ80 394 aaKnown RBP27.88■■■□□ 2.05
LAMA3-204ENST00000585600 PARP3Q9Y6F1 533 aa27.88■■■□□ 2.05
LAMA3-204ENST00000585600 PSDA5PKW4 1024 aaPredicted RBP27.87■■■□□ 2.05
LAMA3-204ENST00000585600 PTPN12Q05209 780 aaKnown RBP27.86■■■□□ 2.05
LAMA3-204ENST00000585600 SF3B3Q15393 1217 aaKnown RBP27.86■■■□□ 2.05
LAMA3-204ENST00000585600 GCC1Q96CN9 775 aa27.85■■■□□ 2.05
LAMA3-204ENST00000585600 EXOC6BQ9Y2D4 811 aa27.85■■■□□ 2.05
LAMA3-204ENST00000585600 DDX60Q8IY21 1712 aaKnown RBP27.85■■■□□ 2.05
LAMA3-204ENST00000585600 ZBTB7AO95365 584 aa27.85■■■□□ 2.05
LAMA3-204ENST00000585600 NLRP3Q96P20 1036 aa27.85■■■□□ 2.05
LAMA3-204ENST00000585600 SURF6O75683 361 aaKnown RBP27.84■■■□□ 2.05
LAMA3-204ENST00000585600 ST5P78524 1137 aa27.84■■■□□ 2.05
LAMA3-204ENST00000585600 ITGA6P23229 1130 aa27.83■■■□□ 2.05
LAMA3-204ENST00000585600 CCDC57Q2TAC2 916 aa27.83■■■□□ 2.05
LAMA3-204ENST00000585600 COPRSQ9NQ92 184 aa27.83■■■□□ 2.05
LAMA3-204ENST00000585600 CCDC152Q4G0S7 254 aa27.83■■■□□ 2.05
LAMA3-204ENST00000585600 ZNF594Q96JF6 807 aaPredicted RBP27.83■■■□□ 2.05
LAMA3-204ENST00000585600 IFIT5Q13325 482 aaKnown RBP27.82■■■□□ 2.04
LAMA3-204ENST00000585600 SEC31BQ9NQW1 1179 aa27.81■■■□□ 2.04
LAMA3-204ENST00000585600 RIC1Q4ADV7 1423 aa27.81■■■□□ 2.04
LAMA3-204ENST00000585600 CASZ1Q86V15 1759 aa27.81■■■□□ 2.04
LAMA3-204ENST00000585600 MTFR1LQ9H019 292 aa27.81■■■□□ 2.04
LAMA3-204ENST00000585600 NRXN2Q9P2S2 1712 aa27.8■■■□□ 2.04
LAMA3-204ENST00000585600 SIL1Q9H173 461 aa27.8■■■□□ 2.04
LAMA3-204ENST00000585600 ATF5Q9Y2D1 282 aaPredicted RBP27.8■■■□□ 2.04
LAMA3-204ENST00000585600 RTL9Q8NET4 1388 aa27.8■■■□□ 2.04
LAMA3-204ENST00000585600 ANKRD18BA2A2Z9 1011 aa27.79■■■□□ 2.04
LAMA3-204ENST00000585600 LAMB2P55268 1798 aa27.79■■■□□ 2.04
LAMA3-204ENST00000585600 APBB1O00213 710 aa27.78■■■□□ 2.04
LAMA3-204ENST00000585600 BRIP1Q9BX63 1249 aa27.78■■■□□ 2.04
LAMA3-204ENST00000585600 KLRG2A4D1S0 409 aaPredicted RBP27.78■■■□□ 2.04
LAMA3-204ENST00000585600 TNRC6CQ9HCJ0 1690 aaKnown RBP27.78■■■□□ 2.04
LAMA3-204ENST00000585600 NUCB1Q02818 461 aa27.77■■■□□ 2.04
LAMA3-204ENST00000585600 CRY2Q49AN0 593 aa27.77■■■□□ 2.04
LAMA3-204ENST00000585600 ANKRD45Q5TZF3 282 aa27.77■■■□□ 2.04
LAMA3-204ENST00000585600 PUS3Q9BZE2 481 aaKnown RBP27.77■■■□□ 2.04
LAMA3-204ENST00000585600 LRRC24Q50LG9 513 aa27.76■■■□□ 2.03
LAMA3-204ENST00000585600 RAB11FIP3O75154 756 aa27.75■■■□□ 2.03
LAMA3-204ENST00000585600 SASH1O94885 1247 aa27.75■■■□□ 2.03
LAMA3-204ENST00000585600 G3BP1Q13283 466 aaKnown RBP eCLIP27.75■■■□□ 2.03
LAMA3-204ENST00000585600 ATG9AQ7Z3C6 839 aa27.75■■■□□ 2.03
LAMA3-204ENST00000585600 SMARCA5O60264 1052 aaPredicted RBP27.74■■■□□ 2.03
LAMA3-204ENST00000585600 HSP90AB4PQ58FF6 505 aa27.74■■■□□ 2.03
LAMA3-204ENST00000585600 TAF7LQ5H9L4 462 aa27.74■■■□□ 2.03
LAMA3-204ENST00000585600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.74■■■□□ 2.03
LAMA3-204ENST00000585600 MYH3P11055 1940 aa27.74■■■□□ 2.03
LAMA3-204ENST00000585600 EYA2O00167 538 aa27.74■■■□□ 2.03
LAMA3-204ENST00000585600 RHPN1Q8TCX5 695 aa27.74■■■□□ 2.03
LAMA3-204ENST00000585600 CHD1LQ86WJ1 897 aa27.73■■■□□ 2.03
LAMA3-204ENST00000585600 CELF1Q92879 486 aaKnown RBP27.73■■■□□ 2.03
LAMA3-204ENST00000585600 SGIP1Q9BQI5 828 aa27.73■■■□□ 2.03
LAMA3-204ENST00000585600 DAXXQ9UER7 740 aaPredicted RBP27.73■■■□□ 2.03
LAMA3-204ENST00000585600 COL4A1P02462 1669 aa27.73■■■□□ 2.03
LAMA3-204ENST00000585600 OS9Q13438 667 aaPredicted RBP27.72■■■□□ 2.03
LAMA3-204ENST00000585600 LDHAL6AQ6ZMR3 332 aa27.72■■■□□ 2.03
LAMA3-204ENST00000585600 LRRCC1Q9C099 1032 aa27.72■■■□□ 2.03
LAMA3-204ENST00000585600 LNPKQ9C0E8 428 aa27.72■■■□□ 2.03
LAMA3-204ENST00000585600 CIAO1O76071 339 aa27.71■■■□□ 2.03
LAMA3-204ENST00000585600 KIF1BPQ96EK5 621 aa27.71■■■□□ 2.03
LAMA3-204ENST00000585600 DDX46Q7L014 1031 aaKnown RBP27.71■■■□□ 2.03
LAMA3-204ENST00000585600 CDC5LQ99459 802 aaKnown RBP27.71■■■□□ 2.03
LAMA3-204ENST00000585600 FBXO3Q9UK99 471 aa27.71■■■□□ 2.03
LAMA3-204ENST00000585600 RIPOR2Q9Y4F9 1068 aa27.71■■■□□ 2.03
LAMA3-204ENST00000585600 PDE6BP35913 854 aa27.7■■■□□ 2.02
LAMA3-204ENST00000585600 NBR1Q14596 966 aa27.7■■■□□ 2.02
LAMA3-204ENST00000585600 IL1RAPL2Q9NP60 686 aa27.7■■■□□ 2.02
LAMA3-204ENST00000585600 SEC24BO95487 1268 aa27.69■■■□□ 2.02
LAMA3-204ENST00000585600 ERC1Q8IUD2 1116 aa27.69■■■□□ 2.02
LAMA3-204ENST00000585600 SRGNP10124 158 aa27.69■■■□□ 2.02
LAMA3-204ENST00000585600 POLD1P28340 1107 aa27.69■■■□□ 2.02
LAMA3-204ENST00000585600 HOXA10P31260 410 aaPredicted RBP27.69■■■□□ 2.02
LAMA3-204ENST00000585600 IL15P40933 162 aaPredicted RBP27.69■■■□□ 2.02
LAMA3-204ENST00000585600 PTGER2P43116 358 aa27.69■■■□□ 2.02
LAMA3-204ENST00000585600 RPGRQ92834 1020 aaKnown RBP27.69■■■□□ 2.02
LAMA3-204ENST00000585600 IGHMBP2P38935 993 aaKnown RBP27.68■■■□□ 2.02
LAMA3-204ENST00000585600 RPS8P62241 208 aaKnown RBP27.68■■■□□ 2.02
LAMA3-204ENST00000585600 ANKRD18AQ8IVF6 992 aa27.68■■■□□ 2.02
LAMA3-204ENST00000585600 C16orf71Q8IYS4 520 aaPredicted RBP27.68■■■□□ 2.02
LAMA3-204ENST00000585600 ANKRD31Q8N7Z5 1873 aa27.68■■■□□ 2.02
LAMA3-204ENST00000585600 TFCP2Q12800 502 aa27.67■■■□□ 2.02
LAMA3-204ENST00000585600 C10orf71Q711Q0 1435 aa27.67■■■□□ 2.02
LAMA3-204ENST00000585600 MPHOSPH8Q99549 860 aa27.67■■■□□ 2.02
LAMA3-204ENST00000585600 BCL11AQ9H165 835 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms