RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	DGKG	P49619	791 aa		6.66	□□□□□ -1.34
PPP4R1-229	ENST00000584754	PHLDB3	Q6NSJ2	640 aa		6.66	□□□□□ -1.34
PPP4R1-229	ENST00000584754	ATCAY	Q86WG3	371 aa		6.66	□□□□□ -1.34
PPP4R1-229	ENST00000584754	ADARB2-AS1	A8MUL3	147 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	PIK3R2	O00459	728 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	PTCD1	O75127	700 aa	Known RBP	6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	ALB	P02768	609 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	SSFA2	P28290	1259 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	HFE2	Q6ZVN8	426 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754		Q8N3U1	123 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	NUDT8	Q8WV74	236 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	TNFRSF25	Q93038	417 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	COL26A1	Q96A83	441 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	DNAJB12	Q9NXW2	375 aa	Known RBP	6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	KCNMB2	Q9Y691	235 aa		6.65	□□□□□ -1.34
PPP4R1-229	ENST00000584754	ZBTB42	B2RXF5	422 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754		M0R082	166 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	XYLB	O75191	536 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	EPB42	P16452	691 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	ZNF417	Q8TAU3	575 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	GPR152	Q8TDT2	470 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	TRIM11	Q96F44	468 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	ANO2	Q9NQ90	1003 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	STIM2	Q9P246	746 aa		6.64	□□□□□ -1.35
PPP4R1-229	ENST00000584754	RARA	P10276	462 aa		6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	CPB1	P15086	417 aa		6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	ZAP70	P43403	619 aa		6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	TRIP4	Q15650	581 aa	Predicted RBP	6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	ALYREF	Q86V81	257 aa	Known RBP	6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	MICALL1	Q8N3F8	863 aa		6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	PLVAP	Q9BX97	442 aa		6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	NAGPA	Q9UK23	515 aa		6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	SLC6A14	Q9UN76	642 aa		6.63	□□□□□ -1.35
PPP4R1-229	ENST00000584754	FAM229A	H3BQW9	127 aa		6.62	□□□□□ -1.35
PPP4R1-229	ENST00000584754	GNB5	O14775	395 aa		6.62	□□□□□ -1.35
PPP4R1-229	ENST00000584754	PLAUR	Q03405	335 aa		6.62	□□□□□ -1.35
PPP4R1-229	ENST00000584754	COL9A3	Q14050	684 aa	Predicted RBP	6.62	□□□□□ -1.35
PPP4R1-229	ENST00000584754	DHX32	Q7L7V1	743 aa	Known RBP	6.62	□□□□□ -1.35
PPP4R1-229	ENST00000584754		J3QW42	95 aa		6.61	□□□□□ -1.35
PPP4R1-229	ENST00000584754	C20orf204	Q6ZNR8	217 aa		6.61	□□□□□ -1.35
PPP4R1-229	ENST00000584754	FAM35A	Q86V20	835 aa		6.61	□□□□□ -1.35
PPP4R1-229	ENST00000584754	EFCC1	Q9HA90	598 aa		6.61	□□□□□ -1.35
PPP4R1-229	ENST00000584754		A6NHS1	94 aa		6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	UBAP1L	F5GYI3	381 aa		6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	MMP20	O60882	483 aa		6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	ABL1	P00519	1130 aa		6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	PDIA4	P13667	645 aa	Known RBP	6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	MPST	P25325	297 aa		6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	PSAPL1	Q6NUJ1	521 aa		6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	RETREG2	Q8NC44	543 aa		6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	NSUN5	Q96P11	429 aa	Known RBP	6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	JPH1	Q9HDC5	661 aa	Predicted RBP	6.6	□□□□□ -1.35
PPP4R1-229	ENST00000584754	MAP3K6	O95382	1288 aa		6.59	□□□□□ -1.35
PPP4R1-229	ENST00000584754	DNM1	Q05193	864 aa	Known RBP	6.59	□□□□□ -1.35
PPP4R1-229	ENST00000584754	ZNF211	Q13398	564 aa	Predicted RBP	6.59	□□□□□ -1.35
PPP4R1-229	ENST00000584754	PERM1	Q5SV97	790 aa		6.59	□□□□□ -1.35
PPP4R1-229	ENST00000584754	HELQ	Q8TDG4	1101 aa		6.59	□□□□□ -1.35
PPP4R1-229	ENST00000584754	PIK3R5	Q8WYR1	880 aa		6.59	□□□□□ -1.35
PPP4R1-229	ENST00000584754	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.59	□□□□□ -1.35
PPP4R1-229	ENST00000584754	EGFR	P00533	1210 aa		6.58	□□□□□ -1.36
PPP4R1-229	ENST00000584754	ARID4A	P29374	1257 aa	Predicted RBP	6.58	□□□□□ -1.36
PPP4R1-229	ENST00000584754	EDEM1	Q92611	657 aa		6.58	□□□□□ -1.36
PPP4R1-229	ENST00000584754	NUDT16	Q96DE0	195 aa	Known RBP	6.58	□□□□□ -1.36
PPP4R1-229	ENST00000584754	TLR7	Q9NYK1	1049 aa	Known RBP	6.58	□□□□□ -1.36
PPP4R1-229	ENST00000584754	C1QTNF9B	B2RNN3	333 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	LILRB5	O75023	590 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	RGS9	O75916	674 aa	Predicted RBP	6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	CYP2E1	P05181	493 aa	Predicted RBP	6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	NID1	P14543	1247 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	EIF1AX	P47813	144 aa	Known RBP	6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	AFF1	P51825	1210 aa	Known RBP	6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	AAMP	Q13685	434 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	PCSK7	Q16549	785 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	TRPM4	Q8TD43	1214 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	PSMG3-AS1	Q96PY0	264 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	GGNBP2	Q9H3C7	697 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	FAM13B	Q9NYF5	915 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	MTMR7	Q9Y216	660 aa		6.57	□□□□□ -1.36
PPP4R1-229	ENST00000584754	PATL2	C9JE40	543 aa	Known RBP	6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	SERPINB4	P48594	390 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	NOM1	Q5C9Z4	860 aa	Known RBP	6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	TRAPPC3L	Q5T215	181 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	ELMSAN1	Q6PJG2	1045 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	NLRP13	Q86W25	1043 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	DMRTC2	Q8IXT2	367 aa	Predicted RBP	6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	ABTB2	Q8N961	1025 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	LPIN3	Q9BQK8	851 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	KRTAP4-8	Q9BYQ9	185 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	SMG9	Q9H0W8	520 aa	Known RBP	6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	C11orf16	Q9NQ32	467 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	TMEM63C	Q9P1W3	806 aa		6.56	□□□□□ -1.36
PPP4R1-229	ENST00000584754	LOC102724428	A0A0B4J2F2	783 aa		6.55	□□□□□ -1.36
PPP4R1-229	ENST00000584754	PSAP	P07602	524 aa		6.55	□□□□□ -1.36
PPP4R1-229	ENST00000584754	EIF2AK2	P19525	551 aa	Known RBP	6.55	□□□□□ -1.36
PPP4R1-229	ENST00000584754	CHRNA4	P43681	627 aa		6.55	□□□□□ -1.36
PPP4R1-229	ENST00000584754	SIK1	P57059	783 aa		6.55	□□□□□ -1.36
PPP4R1-229	ENST00000584754	GPLD1	P80108	840 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms