RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
COPS3-218ENST00000584216 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
COPS3-218ENST00000584216 TSKSQ9UJT2 592 aa17.59■□□□□ 0.41
COPS3-218ENST00000584216 TRPM7Q96QT4 1865 aa17.58■□□□□ 0.41
COPS3-218ENST00000584216 NOGQ13253 232 aa17.58■□□□□ 0.4
COPS3-218ENST00000584216 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
COPS3-218ENST00000584216 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
COPS3-218ENST00000584216 ZNF408Q9H9D4 720 aa17.58■□□□□ 0.4
COPS3-218ENST00000584216 TSPYL4Q9UJ04 414 aa17.58■□□□□ 0.4
COPS3-218ENST00000584216 H7C1D1 291 aa17.57■□□□□ 0.4
COPS3-218ENST00000584216 PLEKHF1Q96S99 279 aa17.57■□□□□ 0.4
COPS3-218ENST00000584216 MCOLN1Q9GZU1 580 aa17.57■□□□□ 0.4
COPS3-218ENST00000584216 RAD17O75943 681 aa17.56■□□□□ 0.4
COPS3-218ENST00000584216 GRAPQ13588 217 aa17.56■□□□□ 0.4
COPS3-218ENST00000584216 SLC51AQ86UW1 340 aa17.56■□□□□ 0.4
COPS3-218ENST00000584216 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
COPS3-218ENST00000584216 THUMPD2Q9BTF0 503 aaKnown RBP17.56■□□□□ 0.4
COPS3-218ENST00000584216 BABAM1Q9NWV8 329 aa17.56■□□□□ 0.4
COPS3-218ENST00000584216 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
COPS3-218ENST00000584216 CNOT7Q9UIV1 285 aaKnown RBP17.55■□□□□ 0.4
COPS3-218ENST00000584216 SH3TC1Q8TE82 1336 aa17.54■□□□□ 0.4
COPS3-218ENST00000584216 DGKZQ13574 1117 aa17.54■□□□□ 0.4
COPS3-218ENST00000584216 LRP10Q7Z4F1 713 aa17.54■□□□□ 0.4
COPS3-218ENST00000584216 DPF2Q92785 391 aa17.54■□□□□ 0.4
COPS3-218ENST00000584216 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
COPS3-218ENST00000584216 HIRAP54198 1017 aaPredicted RBP17.53■□□□□ 0.4
COPS3-218ENST00000584216 HUNKP57058 714 aa17.53■□□□□ 0.4
COPS3-218ENST00000584216 PDIA6Q15084 440 aa17.53■□□□□ 0.4
COPS3-218ENST00000584216 NLRP10Q86W26 655 aa17.53■□□□□ 0.4
COPS3-218ENST00000584216 MICALL2Q8IY33 904 aa17.53■□□□□ 0.4
COPS3-218ENST00000584216 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
COPS3-218ENST00000584216 PCDH10Q9P2E7 1040 aa17.53■□□□□ 0.4
COPS3-218ENST00000584216 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
COPS3-218ENST00000584216 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
COPS3-218ENST00000584216 RPS12P25398 132 aaKnown RBP17.51■□□□□ 0.39
COPS3-218ENST00000584216 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
COPS3-218ENST00000584216 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
COPS3-218ENST00000584216 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
COPS3-218ENST00000584216 USP48Q86UV5 1035 aa17.51■□□□□ 0.39
COPS3-218ENST00000584216 C2orf69Q8N8R5 385 aa17.51■□□□□ 0.39
COPS3-218ENST00000584216 CCDC102AQ96A19 550 aa17.51■□□□□ 0.39
COPS3-218ENST00000584216 SAGE1Q9NXZ1 904 aa17.51■□□□□ 0.39
COPS3-218ENST00000584216 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
COPS3-218ENST00000584216 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
COPS3-218ENST00000584216 YDJCA8MPS7 323 aa17.49■□□□□ 0.39
COPS3-218ENST00000584216 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
COPS3-218ENST00000584216 RGMBQ6NW40 437 aa17.49■□□□□ 0.39
COPS3-218ENST00000584216 XAGE3Q8WTP9 111 aa17.49■□□□□ 0.39
COPS3-218ENST00000584216 DCPSQ96C86 337 aaKnown RBP17.49■□□□□ 0.39
COPS3-218ENST00000584216 EYA3Q99504 573 aa17.49■□□□□ 0.39
COPS3-218ENST00000584216 GBA2Q9HCG7 927 aaPredicted RBP17.49■□□□□ 0.39
COPS3-218ENST00000584216 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
COPS3-218ENST00000584216 ANXA1P04083 346 aa17.48■□□□□ 0.39
COPS3-218ENST00000584216 RIPK4P57078 832 aa17.48■□□□□ 0.39
COPS3-218ENST00000584216 NSFL1CQ9UNZ2 370 aaKnown RBP17.48■□□□□ 0.39
COPS3-218ENST00000584216 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
COPS3-218ENST00000584216 PSMD14O00487 310 aa17.47■□□□□ 0.39
COPS3-218ENST00000584216 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
COPS3-218ENST00000584216 C6orf229H3BNL8 230 aa17.46■□□□□ 0.39
COPS3-218ENST00000584216 TBC1D10BQ4KMP7 808 aaPredicted RBP17.46■□□□□ 0.39
COPS3-218ENST00000584216 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
COPS3-218ENST00000584216 DBNDD1Q9H9R9 158 aa17.46■□□□□ 0.39
COPS3-218ENST00000584216 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
COPS3-218ENST00000584216 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
COPS3-218ENST00000584216 ZNF157P51786 506 aaPredicted RBP17.45■□□□□ 0.38
COPS3-218ENST00000584216 SULF1Q8IWU6 871 aa17.45■□□□□ 0.38
COPS3-218ENST00000584216 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
COPS3-218ENST00000584216 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
COPS3-218ENST00000584216 FAM155AB1AL88 458 aaPredicted RBP17.44■□□□□ 0.38
COPS3-218ENST00000584216 ECE2O60344 883 aa17.44■□□□□ 0.38
COPS3-218ENST00000584216 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
COPS3-218ENST00000584216 SF3B3Q15393 1217 aaKnown RBP17.44■□□□□ 0.38
COPS3-218ENST00000584216 PLBD2Q8NHP8 589 aa17.44■□□□□ 0.38
COPS3-218ENST00000584216 ZIC5Q96T25 663 aa17.44■□□□□ 0.38
COPS3-218ENST00000584216 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
COPS3-218ENST00000584216 G3V3G9 751 aa17.43■□□□□ 0.38
COPS3-218ENST00000584216 RIMBP2O15034 1052 aa17.43■□□□□ 0.38
COPS3-218ENST00000584216 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
COPS3-218ENST00000584216 KIF4BQ2VIQ3 1234 aa17.43■□□□□ 0.38
COPS3-218ENST00000584216 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
COPS3-218ENST00000584216 LAMB2P55268 1798 aa17.43■□□□□ 0.38
COPS3-218ENST00000584216 ADM5C9JUS6 153 aa17.42■□□□□ 0.38
COPS3-218ENST00000584216 HOXB7P09629 217 aa17.42■□□□□ 0.38
COPS3-218ENST00000584216 RBM26Q5T8P6 1007 aaKnown RBP17.42■□□□□ 0.38
COPS3-218ENST00000584216 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
COPS3-218ENST00000584216 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
COPS3-218ENST00000584216 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
COPS3-218ENST00000584216 POLLQ9UGP5 575 aa17.42■□□□□ 0.38
COPS3-218ENST00000584216 TRPA1O75762 1119 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 SLC10A3P09131 477 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
COPS3-218ENST00000584216 GPSM2P81274 684 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 RNF186Q9NXI6 227 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 GGA3Q9NZ52 723 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
COPS3-218ENST00000584216 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
COPS3-218ENST00000584216 EGFRP00533 1210 aa17.4■□□□□ 0.38
COPS3-218ENST00000584216 VIL1P09327 827 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms