RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CDCA7LQ96GN5 454 aa31.91■■■□□ 2.7
TSEN54-209ENST00000583454 PHAXQ9H814 394 aaKnown RBP31.91■■■□□ 2.7
TSEN54-209ENST00000583454 CACNA1FO60840 1977 aa31.9■■■□□ 2.7
TSEN54-209ENST00000583454 LRRC37AA6NMS7 1700 aa31.9■■■□□ 2.7
TSEN54-209ENST00000583454 ITGBL1O95965 494 aaPredicted RBP31.9■■■□□ 2.7
TSEN54-209ENST00000583454 STK31Q9BXU1 1019 aa31.9■■■□□ 2.7
TSEN54-209ENST00000583454 ATP6V0A2Q9Y487 856 aa31.9■■■□□ 2.7
TSEN54-209ENST00000583454 HCLS1P14317 486 aaPredicted RBP31.89■■■□□ 2.7
TSEN54-209ENST00000583454 EAPPQ56P03 285 aaPredicted RBP31.87■■■□□ 2.69
TSEN54-209ENST00000583454 LARGE2Q8N3Y3 721 aa31.87■■■□□ 2.69
TSEN54-209ENST00000583454 COL13A1Q5TAT6 717 aaPredicted RBP31.86■■■□□ 2.69
TSEN54-209ENST00000583454 TRMT112Q9UI30 125 aaKnown RBP31.86■■■□□ 2.69
TSEN54-209ENST00000583454 DUOX1Q9NRD9 1551 aa31.85■■■□□ 2.69
TSEN54-209ENST00000583454 SH3TC1Q8TE82 1336 aa31.85■■■□□ 2.69
TSEN54-209ENST00000583454 SLC4A2P04920 1241 aa31.85■■■□□ 2.69
TSEN54-209ENST00000583454 HNRNPUQ00839 825 aaKnown RBP eCLIP31.85■■■□□ 2.69
TSEN54-209ENST00000583454 COL4A1P02462 1669 aa31.85■■■□□ 2.69
TSEN54-209ENST00000583454 EIF6P56537 245 aaKnown RBP31.84■■■□□ 2.69
TSEN54-209ENST00000583454 ISCA1Q9BUE6 129 aa31.84■■■□□ 2.69
TSEN54-209ENST00000583454 RTFDC1Q9BY42 306 aaPredicted RBP31.84■■■□□ 2.69
TSEN54-209ENST00000583454 SCNN1DP51172 638 aa31.83■■■□□ 2.69
TSEN54-209ENST00000583454 PNMA8AQ86V59 439 aaPredicted RBP31.83■■■□□ 2.69
TSEN54-209ENST00000583454 MKRN1Q9UHC7 482 aaKnown RBP31.83■■■□□ 2.69
TSEN54-209ENST00000583454 GJA3Q9Y6H8 435 aa31.83■■■□□ 2.69
TSEN54-209ENST00000583454 HSPA1AP0DMV8 641 aaKnown RBP31.82■■■□□ 2.68
TSEN54-209ENST00000583454 HSPA1BP0DMV9 641 aaKnown RBP31.82■■■□□ 2.68
TSEN54-209ENST00000583454 ZNF428Q96B54 188 aa31.82■■■□□ 2.68
TSEN54-209ENST00000583454 CNTNAP1P78357 1384 aa31.81■■■□□ 2.68
TSEN54-209ENST00000583454 PPIP5K2O43314 1243 aa31.81■■■□□ 2.68
TSEN54-209ENST00000583454 BBOX1O75936 387 aa31.81■■■□□ 2.68
TSEN54-209ENST00000583454 AOC3Q16853 763 aa31.81■■■□□ 2.68
TSEN54-209ENST00000583454 G2E3Q7L622 706 aa31.81■■■□□ 2.68
TSEN54-209ENST00000583454 RIC3Q7Z5B4 369 aa31.81■■■□□ 2.68
TSEN54-209ENST00000583454 SP8Q8IXZ3 490 aa31.81■■■□□ 2.68
TSEN54-209ENST00000583454 DDX58O95786 925 aaKnown RBP31.8■■■□□ 2.68
TSEN54-209ENST00000583454 MAP1SQ66K74 1059 aaPredicted RBP31.8■■■□□ 2.68
TSEN54-209ENST00000583454 NIM1KQ8IY84 436 aa31.8■■■□□ 2.68
TSEN54-209ENST00000583454 VPS33BQ9H267 617 aa31.8■■■□□ 2.68
TSEN54-209ENST00000583454 CLEC11AQ9Y240 323 aa31.8■■■□□ 2.68
TSEN54-209ENST00000583454 GRAPQ13588 217 aa31.79■■■□□ 2.68
TSEN54-209ENST00000583454 GRAPLQ8TC17 118 aaPredicted RBP31.79■■■□□ 2.68
TSEN54-209ENST00000583454 EPS15P42566 896 aa31.78■■■□□ 2.68
TSEN54-209ENST00000583454 TRIM28Q13263 835 aaKnown RBP31.78■■■□□ 2.68
TSEN54-209ENST00000583454 ATP5J2-PTCD1G3V325 749 aa31.77■■■□□ 2.68
TSEN54-209ENST00000583454 KSR2Q6VAB6 950 aa31.77■■■□□ 2.68
TSEN54-209ENST00000583454 DDX46Q7L014 1031 aaKnown RBP31.77■■■□□ 2.68
TSEN54-209ENST00000583454 CNTROBQ8N137 903 aa31.77■■■□□ 2.68
TSEN54-209ENST00000583454 TMEM88BA6NKF7 163 aa31.76■■■□□ 2.67
TSEN54-209ENST00000583454 FLIIQ13045 1269 aa31.76■■■□□ 2.67
TSEN54-209ENST00000583454 FAM89AQ96GI7 184 aa31.76■■■□□ 2.67
TSEN54-209ENST00000583454 PI4KAP2A4QPH2 592 aa31.75■■■□□ 2.67
TSEN54-209ENST00000583454 DPP8Q6V1X1 898 aaPredicted RBP31.75■■■□□ 2.67
TSEN54-209ENST00000583454 MPNDQ8N594 471 aa31.75■■■□□ 2.67
TSEN54-209ENST00000583454 PI4KAP1Q8N8J0 262 aa31.75■■■□□ 2.67
TSEN54-209ENST00000583454 SUPT20HQ8NEM7 779 aa31.75■■■□□ 2.67
TSEN54-209ENST00000583454 TMX4Q9H1E5 349 aaPredicted RBP31.75■■■□□ 2.67
TSEN54-209ENST00000583454 TRPM7Q96QT4 1865 aa31.75■■■□□ 2.67
TSEN54-209ENST00000583454 LMOD1P29536 600 aaPredicted RBP31.74■■■□□ 2.67
TSEN54-209ENST00000583454 CXCL9Q07325 125 aa31.74■■■□□ 2.67
TSEN54-209ENST00000583454 METTL22Q9BUU2 404 aaPredicted RBP31.74■■■□□ 2.67
TSEN54-209ENST00000583454 ZNRF3Q9ULT6 936 aa31.74■■■□□ 2.67
TSEN54-209ENST00000583454 MAP3K2Q9Y2U5 619 aa31.74■■■□□ 2.67
TSEN54-209ENST00000583454 KIAA2012Q0VF49 1180 aa31.73■■■□□ 2.67
TSEN54-209ENST00000583454 SF3B3Q15393 1217 aaKnown RBP31.73■■■□□ 2.67
TSEN54-209ENST00000583454 CT47B1P0C2W7 299 aaPredicted RBP31.72■■■□□ 2.67
TSEN54-209ENST00000583454 ZBED9Q6R2W3 1325 aa31.72■■■□□ 2.67
TSEN54-209ENST00000583454 MYD88Q99836 296 aa31.71■■■□□ 2.67
TSEN54-209ENST00000583454 TMC4Q7Z404 712 aa31.7■■■□□ 2.67
TSEN54-209ENST00000583454 CELF1Q92879 486 aaKnown RBP31.7■■■□□ 2.67
TSEN54-209ENST00000583454 GPRC5DQ9NZD1 345 aa31.7■■■□□ 2.67
TSEN54-209ENST00000583454 VEGFBP49765 207 aa31.69■■■□□ 2.66
TSEN54-209ENST00000583454 FKBP5Q13451 457 aaPredicted RBP31.69■■■□□ 2.66
TSEN54-209ENST00000583454 USP50Q70EL3 339 aaPredicted RBP31.69■■■□□ 2.66
TSEN54-209ENST00000583454 FMR1Q06787 632 aaKnown RBP eCLIP31.68■■■□□ 2.66
TSEN54-209ENST00000583454 MRPL50Q8N5N7 158 aaKnown RBP31.68■■■□□ 2.66
TSEN54-209ENST00000583454 RASSF10A6NK89 507 aa31.67■■■□□ 2.66
TSEN54-209ENST00000583454 RTL5Q5HYW3 569 aaPredicted RBP31.67■■■□□ 2.66
TSEN54-209ENST00000583454 CCDC191Q8NCU4 936 aa31.67■■■□□ 2.66
TSEN54-209ENST00000583454 SSH1Q8WYL5 1049 aa31.67■■■□□ 2.66
TSEN54-209ENST00000583454 YDJCA8MPS7 323 aa31.66■■■□□ 2.66
TSEN54-209ENST00000583454 IRS4O14654 1257 aaPredicted RBP31.66■■■□□ 2.66
TSEN54-209ENST00000583454 GMPSP49915 693 aaPredicted RBP31.66■■■□□ 2.66
TSEN54-209ENST00000583454 ALDH1L2Q3SY69 923 aa31.66■■■□□ 2.66
TSEN54-209ENST00000583454 THSD7BQ9C0I4 1608 aa31.65■■■□□ 2.66
TSEN54-209ENST00000583454 IGKV5-2P06315 115 aa31.65■■■□□ 2.66
TSEN54-209ENST00000583454 ADARB2Q9NS39 739 aaKnown RBP31.65■■■□□ 2.66
TSEN54-209ENST00000583454 CIAPIN1Q6FI81 312 aa31.64■■■□□ 2.66
TSEN54-209ENST00000583454 DNAAF4Q8WXU2 420 aa31.64■■■□□ 2.66
TSEN54-209ENST00000583454 RAD17O75943 681 aa31.63■■■□□ 2.65
TSEN54-209ENST00000583454 NEXNQ0ZGT2 675 aa31.63■■■□□ 2.65
TSEN54-209ENST00000583454 ZBTB38Q8NAP3 1195 aaPredicted RBP31.63■■■□□ 2.65
TSEN54-209ENST00000583454 CWC25Q9NXE8 425 aaPredicted RBP31.63■■■□□ 2.65
TSEN54-209ENST00000583454 CDHR2Q9BYE9 1310 aa31.63■■■□□ 2.65
TSEN54-209ENST00000583454 SCN9AQ15858 1988 aa31.62■■■□□ 2.65
TSEN54-209ENST00000583454 TNS4Q8IZW8 715 aa31.62■■■□□ 2.65
TSEN54-209ENST00000583454 TRAF5O00463 557 aa31.61■■■□□ 2.65
TSEN54-209ENST00000583454 FOXN1O15353 648 aa31.61■■■□□ 2.65
TSEN54-209ENST00000583454 GPSM2P81274 684 aa31.6■■■□□ 2.65
TSEN54-209ENST00000583454 POLLQ9UGP5 575 aa31.6■■■□□ 2.65
TSEN54-209ENST00000583454 NEURL1BA8MQ27 555 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms