RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
ERBB2-215ENST00000583391 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
ERBB2-215ENST00000583391 SRGNP10124 158 aa16.39■□□□□ 0.21
ERBB2-215ENST00000583391 CTSWP56202 376 aa16.39■□□□□ 0.21
ERBB2-215ENST00000583391 CRY2Q49AN0 593 aa16.39■□□□□ 0.21
ERBB2-215ENST00000583391 ZNF622Q969S3 477 aaKnown RBP eCLIP16.39■□□□□ 0.21
ERBB2-215ENST00000583391 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
ERBB2-215ENST00000583391 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
ERBB2-215ENST00000583391 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
ERBB2-215ENST00000583391 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 GNAI3P08754 354 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 NPR1P16066 1061 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 KCNA3P22001 575 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 EPHA10Q5JZY3 1008 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 KAZALD1Q96I82 304 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 BICC1Q9H694 974 aaKnown RBP16.37■□□□□ 0.21
ERBB2-215ENST00000583391 CHMP3Q9Y3E7 222 aa16.37■□□□□ 0.21
ERBB2-215ENST00000583391 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
ERBB2-215ENST00000583391 FER1L6Q2WGJ9 1857 aa16.36■□□□□ 0.21
ERBB2-215ENST00000583391 FOXO4P98177 505 aa16.36■□□□□ 0.21
ERBB2-215ENST00000583391 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
ERBB2-215ENST00000583391 FAM161AQ3B820 660 aa16.36■□□□□ 0.21
ERBB2-215ENST00000583391 STYK1Q6J9G0 422 aa16.36■□□□□ 0.21
ERBB2-215ENST00000583391 TTLL11Q8NHH1 800 aa16.36■□□□□ 0.21
ERBB2-215ENST00000583391 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
ERBB2-215ENST00000583391 GREM2Q9H772 168 aa16.36■□□□□ 0.21
ERBB2-215ENST00000583391 DDX19BQ9UMR2 479 aa16.36■□□□□ 0.21
ERBB2-215ENST00000583391 LMBR1LQ6UX01 489 aa16.35■□□□□ 0.21
ERBB2-215ENST00000583391 DDX46Q7L014 1031 aaKnown RBP16.35■□□□□ 0.21
ERBB2-215ENST00000583391 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
ERBB2-215ENST00000583391 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
ERBB2-215ENST00000583391 C1orf115Q9H7X2 142 aa16.35■□□□□ 0.21
ERBB2-215ENST00000583391 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
ERBB2-215ENST00000583391 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-215ENST00000583391 PRPF40BQ6NWY9 871 aaKnown RBP16.34■□□□□ 0.21
ERBB2-215ENST00000583391 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
ERBB2-215ENST00000583391 ZBTB7BO15156 539 aaPredicted RBP16.33■□□□□ 0.2
ERBB2-215ENST00000583391 GNAI2P04899 355 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 TTLL6Q8N841 843 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 CNKSR1Q969H4 720 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 SEC31BQ9NQW1 1179 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 BCS1LQ9Y276 419 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 LTBP1Q14766 1721 aa16.33■□□□□ 0.2
ERBB2-215ENST00000583391 SBF1O95248 1867 aa16.32■□□□□ 0.2
ERBB2-215ENST00000583391 CSF1RP07333 972 aa16.32■□□□□ 0.2
ERBB2-215ENST00000583391 ITGA6P23229 1130 aa16.32■□□□□ 0.2
ERBB2-215ENST00000583391 IRX6P78412 446 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-215ENST00000583391 GRAPQ13588 217 aa16.32■□□□□ 0.2
ERBB2-215ENST00000583391 RABL6Q3YEC7 729 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-215ENST00000583391 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
ERBB2-215ENST00000583391 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-215ENST00000583391 CRAMP1Q96RY5 1269 aa16.32■□□□□ 0.2
ERBB2-215ENST00000583391 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-215ENST00000583391 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
ERBB2-215ENST00000583391 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
ERBB2-215ENST00000583391 SLC51AQ86UW1 340 aa16.31■□□□□ 0.2
ERBB2-215ENST00000583391 CELF1Q92879 486 aaKnown RBP16.31■□□□□ 0.2
ERBB2-215ENST00000583391 CHD4Q14839 1912 aa16.31■□□□□ 0.2
ERBB2-215ENST00000583391 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
ERBB2-215ENST00000583391 IFIT5Q13325 482 aaKnown RBP16.3■□□□□ 0.2
ERBB2-215ENST00000583391 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
ERBB2-215ENST00000583391 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
ERBB2-215ENST00000583391 DICER1Q9UPY3 1922 aaKnown RBP16.29■□□□□ 0.2
ERBB2-215ENST00000583391 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
ERBB2-215ENST00000583391 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
ERBB2-215ENST00000583391 TAF7LQ5H9L4 462 aa16.29■□□□□ 0.2
ERBB2-215ENST00000583391 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
ERBB2-215ENST00000583391 ZBTB40Q9NUA8 1239 aa16.29■□□□□ 0.2
ERBB2-215ENST00000583391 UTRNP46939 3433 aa16.29■□□□□ 0.2
ERBB2-215ENST00000583391 TIAM2Q8IVF5 1701 aa16.28■□□□□ 0.2
ERBB2-215ENST00000583391 C21orf2O43822 256 aa16.28■□□□□ 0.2
ERBB2-215ENST00000583391 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
ERBB2-215ENST00000583391 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-215ENST00000583391 DUOX1Q9NRD9 1551 aa16.28■□□□□ 0.2
ERBB2-215ENST00000583391 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
ERBB2-215ENST00000583391 IGHMBP2P38935 993 aaKnown RBP16.27■□□□□ 0.2
ERBB2-215ENST00000583391 RPS8P62241 208 aaKnown RBP16.27■□□□□ 0.2
ERBB2-215ENST00000583391 GPR162Q16538 588 aa16.27■□□□□ 0.2
ERBB2-215ENST00000583391 KLHDC4Q8TBB5 520 aa16.27■□□□□ 0.2
ERBB2-215ENST00000583391 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
ERBB2-215ENST00000583391 BBOX1O75936 387 aa16.26■□□□□ 0.19
ERBB2-215ENST00000583391 MTX1Q13505 466 aa16.26■□□□□ 0.19
ERBB2-215ENST00000583391 CEP85Q6P2H3 762 aa16.26■□□□□ 0.19
ERBB2-215ENST00000583391 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
ERBB2-215ENST00000583391 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
ERBB2-215ENST00000583391 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
ERBB2-215ENST00000583391 MYH13Q9UKX3 1938 aa16.25■□□□□ 0.19
ERBB2-215ENST00000583391 ARAP2Q8WZ64 1704 aa16.25■□□□□ 0.19
ERBB2-215ENST00000583391 RFX5P48382 616 aaPredicted RBP16.25■□□□□ 0.19
ERBB2-215ENST00000583391 CCDC93Q567U6 631 aa16.25■□□□□ 0.19
ERBB2-215ENST00000583391 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
ERBB2-215ENST00000583391 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
ERBB2-215ENST00000583391 C7orf43Q8WVR3 580 aa16.24■□□□□ 0.19
ERBB2-215ENST00000583391 SIL1Q9H173 461 aa16.24■□□□□ 0.19
ERBB2-215ENST00000583391 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
ERBB2-215ENST00000583391 PA2G4Q9UQ80 394 aaKnown RBP16.24■□□□□ 0.19
ERBB2-215ENST00000583391 PTPN12Q05209 780 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms