RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 FBXO46Q6PJ61 603 aaPredicted RBP9.48□□□□□ -0.89
CTC1-211ENST00000583254 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
CTC1-211ENST00000583254 NGEFQ8N5V2 710 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 SUPT20HQ8NEM7 779 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
CTC1-211ENST00000583254 TMX4Q9H1E5 349 aaPredicted RBP9.48□□□□□ -0.89
CTC1-211ENST00000583254 DUOX1Q9NRD9 1551 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 ABCC4O15439 1325 aa9.48□□□□□ -0.89
CTC1-211ENST00000583254 COL3A1P02461 1466 aaPredicted RBP9.47□□□□□ -0.89
CTC1-211ENST00000583254 BRCA2P51587 3418 aa9.47□□□□□ -0.89
CTC1-211ENST00000583254 SUSD4Q5VX71 490 aa9.47□□□□□ -0.89
CTC1-211ENST00000583254 DCPSQ96C86 337 aaKnown RBP9.47□□□□□ -0.89
CTC1-211ENST00000583254 KNSTRNQ9Y448 316 aa9.47□□□□□ -0.89
CTC1-211ENST00000583254 RBBP6Q7Z6E9 1792 aaKnown RBP9.47□□□□□ -0.89
CTC1-211ENST00000583254 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
CTC1-211ENST00000583254 POTEFA5A3E0 1075 aa9.46□□□□□ -0.9
CTC1-211ENST00000583254 PSMD14O00487 310 aa9.46□□□□□ -0.9
CTC1-211ENST00000583254 NTSR2O95665 410 aa9.46□□□□□ -0.9
CTC1-211ENST00000583254 RBM26Q5T8P6 1007 aaKnown RBP9.46□□□□□ -0.9
CTC1-211ENST00000583254 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
CTC1-211ENST00000583254 GGA3Q9NZ52 723 aa9.46□□□□□ -0.9
CTC1-211ENST00000583254 MAP3K15Q6ZN16 1313 aa9.46□□□□□ -0.9
CTC1-211ENST00000583254 TAF1P21675 1872 aa9.46□□□□□ -0.9
CTC1-211ENST00000583254 DDX60Q8IY21 1712 aaKnown RBP9.45□□□□□ -0.9
CTC1-211ENST00000583254 ERVV-1B6SEH8 477 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 GPR25O00155 361 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
CTC1-211ENST00000583254 TTLL7Q6ZT98 887 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 MPNDQ8N594 471 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 DPF2Q92785 391 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 CDCA5Q96FF9 252 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 ZBTB3Q9H5J0 574 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 ASTN2O75129 1339 aaPredicted RBP9.45□□□□□ -0.9
CTC1-211ENST00000583254 LRRC37AA6NMS7 1700 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 ANKRD36CQ5JPF3 1778 aa9.45□□□□□ -0.9
CTC1-211ENST00000583254 DLL1O00548 723 aa9.44□□□□□ -0.9
CTC1-211ENST00000583254 KIF4BQ2VIQ3 1234 aa9.44□□□□□ -0.9
CTC1-211ENST00000583254 AMER1Q5JTC6 1135 aaPredicted RBP9.44□□□□□ -0.9
CTC1-211ENST00000583254 KIF6Q6ZMV9 814 aa9.44□□□□□ -0.9
CTC1-211ENST00000583254 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
CTC1-211ENST00000583254 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
CTC1-211ENST00000583254 DBNDD1Q9H9R9 158 aa9.44□□□□□ -0.9
CTC1-211ENST00000583254 COLQQ9Y215 455 aaPredicted RBP9.44□□□□□ -0.9
CTC1-211ENST00000583254 FKTNO75072 461 aa9.43□□□□□ -0.9
CTC1-211ENST00000583254 MOB2Q70IA6 237 aa9.43□□□□□ -0.9
CTC1-211ENST00000583254 MCM10Q7L590 875 aa9.43□□□□□ -0.9
CTC1-211ENST00000583254 SP8Q8IXZ3 490 aa9.43□□□□□ -0.9
CTC1-211ENST00000583254 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
CTC1-211ENST00000583254 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
CTC1-211ENST00000583254 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
CTC1-211ENST00000583254 RTL9Q8NET4 1388 aa9.42□□□□□ -0.9
CTC1-211ENST00000583254 RPS12P25398 132 aaKnown RBP9.42□□□□□ -0.9
CTC1-211ENST00000583254 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
CTC1-211ENST00000583254 NOM1Q5C9Z4 860 aaKnown RBP9.42□□□□□ -0.9
CTC1-211ENST00000583254 R3HDMLQ9H3Y0 253 aa9.42□□□□□ -0.9
CTC1-211ENST00000583254 RRP7AQ9Y3A4 280 aaKnown RBP9.42□□□□□ -0.9
CTC1-211ENST00000583254 BBOX1O75936 387 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
CTC1-211ENST00000583254 MYL6BP14649 208 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 PRKAR2BP31323 418 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 ANGEL2Q5VTE6 544 aaKnown RBP9.41□□□□□ -0.9
CTC1-211ENST00000583254 PPP1R42Q7Z4L9 355 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 TRIOBPQ9H2D6 2365 aa9.41□□□□□ -0.9
CTC1-211ENST00000583254 COL6A3P12111 3177 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 A0A0C4DFX4 3053 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 KIAA0100Q14667 2235 aaKnown RBP9.4□□□□□ -0.9
CTC1-211ENST00000583254 UBE2Q2LH0YL09 131 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 RIMBP2O15034 1052 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 ECE2O60344 883 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 EN2P19622 333 aaPredicted RBP9.4□□□□□ -0.9
CTC1-211ENST00000583254 FKBP1BP68106 108 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 GRAPQ13588 217 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 WASHC4Q2M389 1173 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
CTC1-211ENST00000583254 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
CTC1-211ENST00000583254 SLC17A8Q8NDX2 589 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
CTC1-211ENST00000583254 UTP14AQ9BVJ6 771 aaKnown RBP9.4□□□□□ -0.9
CTC1-211ENST00000583254 MIS18AQ9NYP9 233 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 SCAF8Q9UPN6 1271 aaKnown RBP9.4□□□□□ -0.9
CTC1-211ENST00000583254 TRIM17Q9Y577 477 aa9.4□□□□□ -0.9
CTC1-211ENST00000583254 COL4A1P02462 1669 aa9.39□□□□□ -0.91
CTC1-211ENST00000583254 HCLS1P14317 486 aaPredicted RBP9.39□□□□□ -0.91
CTC1-211ENST00000583254 TM4SF4P48230 202 aa9.39□□□□□ -0.91
CTC1-211ENST00000583254 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
CTC1-211ENST00000583254 PARP10Q53GL7 1025 aa9.39□□□□□ -0.91
CTC1-211ENST00000583254 SLC10A5Q5PT55 438 aa9.39□□□□□ -0.91
CTC1-211ENST00000583254 CC2D1BQ5T0F9 858 aaKnown RBP9.39□□□□□ -0.91
CTC1-211ENST00000583254 DDX46Q7L014 1031 aaKnown RBP9.39□□□□□ -0.91
CTC1-211ENST00000583254 OTOP1Q7RTM1 612 aa9.39□□□□□ -0.91
CTC1-211ENST00000583254 RTF1Q92541 710 aaKnown RBP9.39□□□□□ -0.91
CTC1-211ENST00000583254 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
CTC1-211ENST00000583254 PSME4Q14997 1843 aa9.38□□□□□ -0.91
CTC1-211ENST00000583254 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTC1-211ENST00000583254 SREBF2Q12772 1141 aa9.38□□□□□ -0.91
CTC1-211ENST00000583254 SCARF1Q14162 830 aa9.38□□□□□ -0.91
CTC1-211ENST00000583254 TTLL12Q14166 644 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms