RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ABCC12Q96J65 1359 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 CRB1P82279 1406 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 USP42Q9H9J4 1324 aaKnown RBP6.84□□□□□ -1.31
RTTN-209ENST00000583043 RNF113AO15541 343 aaKnown RBP6.84□□□□□ -1.31
RTTN-209ENST00000583043 METTL24Q5JXM2 366 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 CCDC83Q8IWF9 413 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 AIDAQ96BJ3 306 aa6.84□□□□□ -1.31
RTTN-209ENST00000583043 FSD2A1L4K1 749 aa6.84□□□□□ -1.32
RTTN-209ENST00000583043 CIAO1O76071 339 aa6.84□□□□□ -1.32
RTTN-209ENST00000583043 COPS6Q7L5N1 327 aa6.84□□□□□ -1.32
RTTN-209ENST00000583043 DHX32Q7L7V1 743 aaKnown RBP6.84□□□□□ -1.32
RTTN-209ENST00000583043 UPF3BQ9BZI7 483 aaKnown RBP6.84□□□□□ -1.32
RTTN-209ENST00000583043 ZNF213O14771 459 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 SLF2Q8IX21 1173 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 BOLA2Q9H3K6 86 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 RIMBP3CA6NJZ7 1639 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 RIMBP3BA6NNM3 1639 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 RIMBP3Q9UFD9 1639 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 EXOC5O00471 708 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 GCKRQ14397 625 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 CREB3L3Q68CJ9 461 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 CD163L1Q9NR16 1453 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 SYCE3A1L190 88 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 EYA2O00167 538 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 GSPT1P15170 499 aaKnown RBP6.83□□□□□ -1.32
RTTN-209ENST00000583043 ME1P48163 572 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 SPTY2D1Q68D10 685 aaPredicted RBP6.83□□□□□ -1.32
RTTN-209ENST00000583043 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 RASSF8Q8NHQ8 419 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 ANKRD26Q9UPS8 1709 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 CALM1P0DP23 149 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 CALM2P0DP24 149 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 CALM3P0DP25 149 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 SKAP1Q86WV1 359 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 C8orf76Q96K31 380 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 SIL1Q9H173 461 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
RTTN-209ENST00000583043 KIF20BQ96Q89 1820 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 NBPF6Q5VWK0 638 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 G2E3Q7L622 706 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 RBM33Q96EV2 1170 aaKnown RBP6.83□□□□□ -1.32
RTTN-209ENST00000583043 NBPF4Q96M43 638 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 PPP1R9BQ96SB3 815 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 RBM42Q9BTD8 480 aaKnown RBP6.83□□□□□ -1.32
RTTN-209ENST00000583043 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
RTTN-209ENST00000583043 DCCP43146 1447 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 UBE3BQ7Z3V4 1068 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 ERCC4Q92889 916 aaPredicted RBP6.82□□□□□ -1.32
RTTN-209ENST00000583043 UBAC1Q9BSL1 405 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 ELP1O95163 1332 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 DYNC1I1O14576 645 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 STIM1Q13586 685 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 VSIG10Q8N0Z9 540 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 ZGPATQ8N5A5 531 aaKnown RBP6.82□□□□□ -1.32
RTTN-209ENST00000583043 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 CCDC150Q8NCX0 1101 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 DDX11Q96FC9 970 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 LDHCP07864 332 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 CAVIN4Q5BKX8 364 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 KBTBD3Q8NAB2 608 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 RPS6KB1P23443 525 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 PAG1Q9NWQ8 432 aa6.82□□□□□ -1.32
RTTN-209ENST00000583043 ZSCAN12O43309 604 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 CCDC152Q4G0S7 254 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 TNNI3KQ59H18 835 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 CCDC112Q8NEF3 446 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 TMEM87BQ96K49 555 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 CCDC8Q9H0W5 538 aaPredicted RBP6.81□□□□□ -1.32
RTTN-209ENST00000583043 PAXBP1Q9Y5B6 917 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 FPGT-TNNI3KV9GXZ4 949 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 PHKG2P15735 406 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 ZSWIM6Q9HCJ5 1215 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 SNX14Q9Y5W7 946 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 ITSN1Q15811 1721 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 KNDC1Q76NI1 1749 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 AK2P54819 239 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
RTTN-209ENST00000583043 TEX35Q5T0J7 233 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 MTA3Q9BTC8 594 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 FBLN1P23142 703 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 HOXA7P31268 230 aaPredicted RBP6.81□□□□□ -1.32
RTTN-209ENST00000583043 LRRC59Q96AG4 307 aaKnown RBP6.81□□□□□ -1.32
RTTN-209ENST00000583043 NRKQ7Z2Y5 1582 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 RPAP1Q9BWH6 1393 aaPredicted RBP6.81□□□□□ -1.32
RTTN-209ENST00000583043 PCP11498 1178 aaKnown RBP6.81□□□□□ -1.32
RTTN-209ENST00000583043 GNAQP50148 359 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 ATP2B3Q16720 1220 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 CCDC12Q8WUD4 166 aaPredicted RBP6.81□□□□□ -1.32
RTTN-209ENST00000583043 NAPBQ9H115 298 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 CARMIL3Q8ND23 1372 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 RTL9Q8NET4 1388 aa6.81□□□□□ -1.32
RTTN-209ENST00000583043 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
RTTN-209ENST00000583043 GSTO1P78417 241 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 FKBP4Q02790 459 aaKnown RBP eCLIP6.8□□□□□ -1.32
RTTN-209ENST00000583043 LMBR1LQ6UX01 489 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 C16orf71Q8IYS4 520 aaPredicted RBP6.8□□□□□ -1.32
RTTN-209ENST00000583043 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 LMBRD1Q9NUN5 540 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 ERBB3P21860 1342 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 NEURL1BA8MQ27 555 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms