RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
SRSF1-205ENST00000582730 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 PPP1R9BQ96SB3 815 aa16.36■□□□□ 0.21
SRSF1-205ENST00000582730 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
SRSF1-205ENST00000582730 SLC27A2O14975 620 aa16.36■□□□□ 0.21
SRSF1-205ENST00000582730 ATP5JP18859 108 aa16.36■□□□□ 0.21
SRSF1-205ENST00000582730 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
SRSF1-205ENST00000582730 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
SRSF1-205ENST00000582730 PDCL3Q9H2J4 239 aa16.36■□□□□ 0.21
SRSF1-205ENST00000582730 RNF20Q5VTR2 975 aa16.36■□□□□ 0.21
SRSF1-205ENST00000582730 LAMB4A4D0S4 1761 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 TIMM10P62072 90 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 ZSCAN30Q86W11 494 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 NSFL1CQ9UNZ2 370 aaKnown RBP16.35■□□□□ 0.21
SRSF1-205ENST00000582730 GLI3P10071 1580 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 VPS53Q5VIR6 699 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
SRSF1-205ENST00000582730 LRRC24Q50LG9 513 aa16.34■□□□□ 0.21
SRSF1-205ENST00000582730 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
SRSF1-205ENST00000582730 PIGBQ92521 554 aa16.34■□□□□ 0.21
SRSF1-205ENST00000582730 SEC62Q99442 399 aaKnown RBP16.34■□□□□ 0.21
SRSF1-205ENST00000582730 KCPQ6ZWJ8 1503 aa16.34■□□□□ 0.21
SRSF1-205ENST00000582730 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
SRSF1-205ENST00000582730 KIF6Q6ZMV9 814 aa16.34■□□□□ 0.21
SRSF1-205ENST00000582730 TAF6LQ9Y6J9 622 aa16.34■□□□□ 0.21
SRSF1-205ENST00000582730 GOLIM4O00461 696 aa16.33■□□□□ 0.21
SRSF1-205ENST00000582730 PSMA5P28066 241 aa16.33■□□□□ 0.21
SRSF1-205ENST00000582730 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.21
SRSF1-205ENST00000582730 TM6SF1Q9BZW5 370 aa16.33■□□□□ 0.2
SRSF1-205ENST00000582730 RPAP1Q9BWH6 1393 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-205ENST00000582730 SYT1P21579 422 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 GJB2P29033 226 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 ANP32BQ92688 251 aaKnown RBP16.32■□□□□ 0.2
SRSF1-205ENST00000582730 SYCE3A1L190 88 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 STX6O43752 255 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 OFD1O75665 1012 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 GPTP24298 496 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 TAF7LQ5H9L4 462 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 PUS3Q9BZE2 481 aaKnown RBP16.32■□□□□ 0.2
SRSF1-205ENST00000582730 TMEM63CQ9P1W3 806 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 MED23Q9ULK4 1368 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-205ENST00000582730 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-205ENST00000582730 ME3Q16798 604 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
SRSF1-205ENST00000582730 COL15A1P39059 1388 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 TAF5LO75529 589 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 MBD3O95983 291 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 SLFNL1Q499Z3 407 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-205ENST00000582730 HAUS7Q99871 368 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 EYA2O00167 538 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 STARD3NLO95772 234 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
SRSF1-205ENST00000582730 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
SRSF1-205ENST00000582730 MSNP26038 577 aaKnown RBP16.3■□□□□ 0.2
SRSF1-205ENST00000582730 ZNF445P59923 1031 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 STK3Q13188 491 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 GORABQ5T7V8 394 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-205ENST00000582730 PRIM1P49642 420 aaKnown RBP16.3■□□□□ 0.2
SRSF1-205ENST00000582730 KCNB2Q92953 911 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 ABCA3Q99758 1704 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 GADD45BO75293 160 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-205ENST00000582730 USP48Q86UV5 1035 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
SRSF1-205ENST00000582730 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
SRSF1-205ENST00000582730 FIBPO43427 364 aa16.29■□□□□ 0.2
SRSF1-205ENST00000582730 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
SRSF1-205ENST00000582730 ZNF609O15014 1411 aa16.29■□□□□ 0.2
SRSF1-205ENST00000582730 TNS2Q63HR2 1409 aa16.29■□□□□ 0.2
SRSF1-205ENST00000582730 IFIT1P09914 478 aaKnown RBP16.29■□□□□ 0.2
SRSF1-205ENST00000582730 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
SRSF1-205ENST00000582730 KBTBD3Q8NAB2 608 aa16.29■□□□□ 0.2
SRSF1-205ENST00000582730 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 RPS6KB1P23443 525 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 FGD1P98174 961 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
SRSF1-205ENST00000582730 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-205ENST00000582730 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 HMG20BQ9P0W2 317 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 F13A1P00488 732 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 RBM10P98175 930 aaKnown RBP16.28■□□□□ 0.2
SRSF1-205ENST00000582730 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
SRSF1-205ENST00000582730 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-205ENST00000582730 HSP90B1P14625 803 aaKnown RBP16.27■□□□□ 0.2
SRSF1-205ENST00000582730 ST3GAL1Q11201 340 aa16.27■□□□□ 0.19
SRSF1-205ENST00000582730 RBSNQ9H1K0 784 aa16.27■□□□□ 0.19
SRSF1-205ENST00000582730 SHANK3Q9BYB0 1731 aa16.27■□□□□ 0.19
SRSF1-205ENST00000582730 EXOC5O00471 708 aa16.26■□□□□ 0.19
SRSF1-205ENST00000582730 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
SRSF1-205ENST00000582730 ADAMTS2O95450 1211 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms