RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 ADARB2Q9NS39 739 aaKnown RBP8.44□□□□□ -1.06
TVP23B-210ENST00000582288 SAGE1Q9NXZ1 904 aa8.44□□□□□ -1.06
TVP23B-210ENST00000582288 GNAT3A8MTJ3 354 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 AOC2O75106 756 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
TVP23B-210ENST00000582288 EPS15P42566 896 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 DOK7Q18PE1 504 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 IL17REQ8NFR9 667 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 GPRC5DQ9NZD1 345 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
TVP23B-210ENST00000582288 GJA3Q9Y6H8 435 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 CDHR2Q9BYE9 1310 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 CEMIPQ8WUJ3 1361 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 RIC1Q4ADV7 1423 aa8.43□□□□□ -1.06
TVP23B-210ENST00000582288 TRAF5O00463 557 aa8.42□□□□□ -1.06
TVP23B-210ENST00000582288 HMOX1P09601 288 aa8.42□□□□□ -1.06
TVP23B-210ENST00000582288 HOXB3P14651 431 aaPredicted RBP8.42□□□□□ -1.06
TVP23B-210ENST00000582288 GRM1Q13255 1194 aa8.42□□□□□ -1.06
TVP23B-210ENST00000582288 NYXQ9GZU5 481 aa8.42□□□□□ -1.06
TVP23B-210ENST00000582288 TSKSQ9UJT2 592 aa8.42□□□□□ -1.06
TVP23B-210ENST00000582288 NIP7Q9Y221 180 aaKnown RBP eCLIP8.42□□□□□ -1.06
TVP23B-210ENST00000582288 KIF7Q2M1P5 1343 aa8.42□□□□□ -1.06
TVP23B-210ENST00000582288 COL4A5P29400 1685 aa8.42□□□□□ -1.06
TVP23B-210ENST00000582288 DIAPH1O60610 1272 aaKnown RBP8.41□□□□□ -1.06
TVP23B-210ENST00000582288 CELF2O95319 508 aaKnown RBP8.41□□□□□ -1.06
TVP23B-210ENST00000582288 FMR1Q06787 632 aaKnown RBP eCLIP8.41□□□□□ -1.06
TVP23B-210ENST00000582288 CIAPIN1Q6FI81 312 aa8.41□□□□□ -1.06
TVP23B-210ENST00000582288 OLFM4Q6UX06 510 aa8.41□□□□□ -1.06
TVP23B-210ENST00000582288 CDC37L1Q7L3B6 337 aa8.41□□□□□ -1.06
TVP23B-210ENST00000582288 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
TVP23B-210ENST00000582288 KNSTRNQ9Y448 316 aa8.41□□□□□ -1.06
TVP23B-210ENST00000582288 IBTKQ9P2D0 1353 aaPredicted RBP8.4□□□□□ -1.06
TVP23B-210ENST00000582288 BTBD11A6QL63 1104 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 G3V3G9 751 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 RIMBP2O15034 1052 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 SNRPA1P09661 255 aaKnown RBP8.4□□□□□ -1.06
TVP23B-210ENST00000582288 VARS2Q5ST30 1063 aaKnown RBP8.4□□□□□ -1.06
TVP23B-210ENST00000582288 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 NIM1KQ8IY84 436 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 GCC1Q96CN9 775 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 CRAMP1Q96RY5 1269 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
TVP23B-210ENST00000582288 ERVV-1B6SEH8 477 aa8.39□□□□□ -1.07
TVP23B-210ENST00000582288 GTF2E1P29083 439 aaPredicted RBP8.39□□□□□ -1.07
TVP23B-210ENST00000582288 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
TVP23B-210ENST00000582288 SUPT20HQ8NEM7 779 aa8.39□□□□□ -1.07
TVP23B-210ENST00000582288 RPGRQ92834 1020 aaKnown RBP8.39□□□□□ -1.07
TVP23B-210ENST00000582288 POLR3GLQ9BT43 218 aa8.39□□□□□ -1.07
TVP23B-210ENST00000582288 RTFDC1Q9BY42 306 aaPredicted RBP8.39□□□□□ -1.07
TVP23B-210ENST00000582288 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
TVP23B-210ENST00000582288 NPC1L1Q9UHC9 1359 aa8.38□□□□□ -1.07
TVP23B-210ENST00000582288 FAM155AB1AL88 458 aaPredicted RBP8.38□□□□□ -1.07
TVP23B-210ENST00000582288 CXCL9Q07325 125 aa8.38□□□□□ -1.07
TVP23B-210ENST00000582288 PKN2Q16513 984 aaKnown RBP8.38□□□□□ -1.07
TVP23B-210ENST00000582288 ZNF687Q8N1G0 1237 aa8.38□□□□□ -1.07
TVP23B-210ENST00000582288 RBM17Q96I25 401 aaKnown RBP8.38□□□□□ -1.07
TVP23B-210ENST00000582288 GLIS2Q9BZE0 524 aaPredicted RBP8.38□□□□□ -1.07
TVP23B-210ENST00000582288 TMX4Q9H1E5 349 aaPredicted RBP8.38□□□□□ -1.07
TVP23B-210ENST00000582288 PCDHB8Q9UN66 801 aa8.38□□□□□ -1.07
TVP23B-210ENST00000582288 CASP8AP2Q9UKL3 1982 aa8.38□□□□□ -1.07
TVP23B-210ENST00000582288 NBPF26B4DH59 902 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
TVP23B-210ENST00000582288 PPIP5K2O43314 1243 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 SOX10P56693 466 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 HUNKP57058 714 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 EIF4G2P78344 907 aaKnown RBP eCLIP8.37□□□□□ -1.07
TVP23B-210ENST00000582288 TNIP1Q15025 636 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 RGMBQ6NW40 437 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 NBPF10Q6P3W6 841 aaKnown RBP8.37□□□□□ -1.07
TVP23B-210ENST00000582288 NBPF15Q8N660 670 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 ATP6V0A2Q9Y487 856 aa8.37□□□□□ -1.07
TVP23B-210ENST00000582288 ABCC12Q96J65 1359 aa8.36□□□□□ -1.07
TVP23B-210ENST00000582288 KCNQ3O43525 872 aa8.36□□□□□ -1.07
TVP23B-210ENST00000582288 PYGBP11216 843 aa8.36□□□□□ -1.07
TVP23B-210ENST00000582288 GMPSP49915 693 aaPredicted RBP8.36□□□□□ -1.07
TVP23B-210ENST00000582288 HLFQ16534 295 aa8.36□□□□□ -1.07
TVP23B-210ENST00000582288 CTU1Q7Z7A3 348 aaKnown RBP8.36□□□□□ -1.07
TVP23B-210ENST00000582288 RNF186Q9NXI6 227 aa8.36□□□□□ -1.07
TVP23B-210ENST00000582288 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
TVP23B-210ENST00000582288 COL3A1P02461 1466 aaPredicted RBP8.35□□□□□ -1.07
TVP23B-210ENST00000582288 H7C1D1 291 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 BBOX1O75936 387 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 HIRAP54198 1017 aaPredicted RBP8.35□□□□□ -1.07
TVP23B-210ENST00000582288 KIAA2012Q0VF49 1180 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 AOC3Q16853 763 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 NOM1Q5C9Z4 860 aaKnown RBP8.35□□□□□ -1.07
TVP23B-210ENST00000582288 C2orf69Q8N8R5 385 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 DPF2Q92785 391 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 ZIC5Q96T25 663 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 PDE4DIPQ5VU43 2346 aa8.35□□□□□ -1.07
TVP23B-210ENST00000582288 MAP3K15Q6ZN16 1313 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 PRAMEF22A3QJZ6 481 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 FAM177BA6PVY3 158 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 HTATSF1O43719 755 aaKnown RBP8.34□□□□□ -1.07
TVP23B-210ENST00000582288 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
TVP23B-210ENST00000582288 KIF23Q02241 960 aaPredicted RBP8.34□□□□□ -1.07
TVP23B-210ENST00000582288 SLC10A5Q5PT55 438 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 NUTM1Q86Y26 1132 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms