RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 SYNE4Q8N205 404 aa17.01■□□□□ 0.31
SNX11-210ENST00000582104 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
SNX11-210ENST00000582104 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
SNX11-210ENST00000582104 SNED1Q8TER0 1413 aa17.01■□□□□ 0.31
SNX11-210ENST00000582104 BCAR3O75815 825 aa17■□□□□ 0.31
SNX11-210ENST00000582104 HOXB7P09629 217 aa17■□□□□ 0.31
SNX11-210ENST00000582104 JDP2Q8WYK2 163 aa17■□□□□ 0.31
SNX11-210ENST00000582104 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
SNX11-210ENST00000582104 EIF6P56537 245 aaKnown RBP16.99■□□□□ 0.31
SNX11-210ENST00000582104 USP50Q70EL3 339 aaPredicted RBP16.99■□□□□ 0.31
SNX11-210ENST00000582104 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
SNX11-210ENST00000582104 KLRG2A4D1S0 409 aaPredicted RBP16.98■□□□□ 0.31
SNX11-210ENST00000582104 CELF2O95319 508 aaKnown RBP16.98■□□□□ 0.31
SNX11-210ENST00000582104 PROSER3Q2NL68 480 aa16.98■□□□□ 0.31
SNX11-210ENST00000582104 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
SNX11-210ENST00000582104 ANXA1P04083 346 aa16.97■□□□□ 0.31
SNX11-210ENST00000582104 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
SNX11-210ENST00000582104 NBPF5PQ86XG9 351 aaPredicted RBP16.97■□□□□ 0.31
SNX11-210ENST00000582104 MRPL50Q8N5N7 158 aaKnown RBP16.97■□□□□ 0.31
SNX11-210ENST00000582104 ZIC5Q96T25 663 aa16.97■□□□□ 0.31
SNX11-210ENST00000582104 PSMD1Q99460 953 aa16.97■□□□□ 0.31
SNX11-210ENST00000582104 A1BGP04217 495 aa16.96■□□□□ 0.31
SNX11-210ENST00000582104 PDIA6Q15084 440 aa16.96■□□□□ 0.31
SNX11-210ENST00000582104 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
SNX11-210ENST00000582104 G2E3Q7L622 706 aa16.96■□□□□ 0.31
SNX11-210ENST00000582104 SMC4Q9NTJ3 1288 aa16.96■□□□□ 0.31
SNX11-210ENST00000582104 CHPF2Q9P2E5 772 aa16.96■□□□□ 0.31
SNX11-210ENST00000582104 NBPF26B4DH59 902 aa16.95■□□□□ 0.3
SNX11-210ENST00000582104 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
SNX11-210ENST00000582104 NBPF10Q6P3W6 841 aaKnown RBP16.95■□□□□ 0.3
SNX11-210ENST00000582104 NBPF15Q8N660 670 aa16.95■□□□□ 0.3
SNX11-210ENST00000582104 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
SNX11-210ENST00000582104 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
SNX11-210ENST00000582104 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
SNX11-210ENST00000582104 NOGQ13253 232 aa16.94■□□□□ 0.3
SNX11-210ENST00000582104 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
SNX11-210ENST00000582104 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
SNX11-210ENST00000582104 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
SNX11-210ENST00000582104 LRP10Q7Z4F1 713 aa16.93■□□□□ 0.3
SNX11-210ENST00000582104 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
SNX11-210ENST00000582104 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
SNX11-210ENST00000582104 TNNQ9UQP3 1299 aa16.93■□□□□ 0.3
SNX11-210ENST00000582104 PLIN1O60240 522 aa16.92■□□□□ 0.3
SNX11-210ENST00000582104 ALDH1B1P30837 517 aa16.92■□□□□ 0.3
SNX11-210ENST00000582104 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
SNX11-210ENST00000582104 ADARB2Q9NS39 739 aaKnown RBP16.92■□□□□ 0.3
SNX11-210ENST00000582104 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
SNX11-210ENST00000582104 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
SNX11-210ENST00000582104 ZNF408Q9H9D4 720 aa16.91■□□□□ 0.3
SNX11-210ENST00000582104 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
SNX11-210ENST00000582104 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
SNX11-210ENST00000582104 MYL6BP14649 208 aa16.9■□□□□ 0.3
SNX11-210ENST00000582104 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
SNX11-210ENST00000582104 CLEC4GQ6UXB4 293 aa16.9■□□□□ 0.3
SNX11-210ENST00000582104 GCC1Q96CN9 775 aa16.9■□□□□ 0.3
SNX11-210ENST00000582104 SAGE1Q9NXZ1 904 aa16.9■□□□□ 0.3
SNX11-210ENST00000582104 GPRC5DQ9NZD1 345 aa16.9■□□□□ 0.3
SNX11-210ENST00000582104 ERBB4Q15303 1308 aa16.9■□□□□ 0.3
SNX11-210ENST00000582104 TPTE2Q6XPS3 522 aa16.89■□□□□ 0.29
SNX11-210ENST00000582104 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
SNX11-210ENST00000582104 FLIIQ13045 1269 aa16.88■□□□□ 0.29
SNX11-210ENST00000582104 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
SNX11-210ENST00000582104 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
SNX11-210ENST00000582104 AKAP11Q9UKA4 1901 aa16.88■□□□□ 0.29
SNX11-210ENST00000582104 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
SNX11-210ENST00000582104 HUNKP57058 714 aa16.87■□□□□ 0.29
SNX11-210ENST00000582104 HABP4Q5JVS0 413 aaKnown RBP16.87■□□□□ 0.29
SNX11-210ENST00000582104 C20orf194Q5TEA3 1177 aa16.87■□□□□ 0.29
SNX11-210ENST00000582104 CTU1Q7Z7A3 348 aaKnown RBP16.87■□□□□ 0.29
SNX11-210ENST00000582104 XAGE3Q8WTP9 111 aa16.87■□□□□ 0.29
SNX11-210ENST00000582104 HYPKQ9NX55 129 aa16.87■□□□□ 0.29
SNX11-210ENST00000582104 NIP7Q9Y221 180 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNX11-210ENST00000582104 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
SNX11-210ENST00000582104 FAM155AB1AL88 458 aaPredicted RBP16.86■□□□□ 0.29
SNX11-210ENST00000582104 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
SNX11-210ENST00000582104 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
SNX11-210ENST00000582104 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
SNX11-210ENST00000582104 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
SNX11-210ENST00000582104 CHMP4AQ9BY43 222 aa16.86■□□□□ 0.29
SNX11-210ENST00000582104 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
SNX11-210ENST00000582104 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
SNX11-210ENST00000582104 TRPA1O75762 1119 aa16.85■□□□□ 0.29
SNX11-210ENST00000582104 RLBP1P12271 317 aa16.85■□□□□ 0.29
SNX11-210ENST00000582104 TRIM27P14373 513 aa16.85■□□□□ 0.29
SNX11-210ENST00000582104 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
SNX11-210ENST00000582104 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
SNX11-210ENST00000582104 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
SNX11-210ENST00000582104 RNF186Q9NXI6 227 aa16.85■□□□□ 0.29
SNX11-210ENST00000582104 F6X3S4 739 aa16.84■□□□□ 0.29
SNX11-210ENST00000582104 GMPSP49915 693 aaPredicted RBP16.84■□□□□ 0.29
SNX11-210ENST00000582104 HIRAP54198 1017 aaPredicted RBP16.84■□□□□ 0.29
SNX11-210ENST00000582104 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
SNX11-210ENST00000582104 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
SNX11-210ENST00000582104 CDC37L1Q7L3B6 337 aa16.84■□□□□ 0.29
SNX11-210ENST00000582104 ZC3H15Q8WU90 426 aaKnown RBP16.84■□□□□ 0.29
SNX11-210ENST00000582104 CLUAP1Q96AJ1 413 aa16.84■□□□□ 0.29
SNX11-210ENST00000582104 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
SNX11-210ENST00000582104 IRX6P78412 446 aaPredicted RBP16.83■□□□□ 0.28
SNX11-210ENST00000582104 FKBP5Q13451 457 aaPredicted RBP16.83■□□□□ 0.28
SNX11-210ENST00000582104 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms