RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
CSNK1D-220ENST00000581737 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-220ENST00000581737 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-220ENST00000581737 CWC25Q9NXE8 425 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-220ENST00000581737 SLX4Q8IY92 1834 aa17.03■□□□□ 0.32
CSNK1D-220ENST00000581737 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
CSNK1D-220ENST00000581737 C7orf43Q8WVR3 580 aa17.03■□□□□ 0.32
CSNK1D-220ENST00000581737 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-220ENST00000581737 RIC1Q4ADV7 1423 aa17.03■□□□□ 0.32
CSNK1D-220ENST00000581737 ZNF541Q9H0D2 1346 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 FAM177BA6PVY3 158 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 F6X3S4 739 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 BCAR3O75815 825 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 NTSR2O95665 410 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 SUSD4Q5VX71 490 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 STYK1Q6J9G0 422 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 CNKSR1Q969H4 720 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 PDZRN3Q9UPQ7 1066 aa17.02■□□□□ 0.32
CSNK1D-220ENST00000581737 SH3TC1Q8TE82 1336 aa17.01■□□□□ 0.31
CSNK1D-220ENST00000581737 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-220ENST00000581737 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
CSNK1D-220ENST00000581737 LDHDQ86WU2 507 aa17.01■□□□□ 0.31
CSNK1D-220ENST00000581737 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-220ENST00000581737 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-220ENST00000581737 LAMB2P55268 1798 aa17.01■□□□□ 0.31
CSNK1D-220ENST00000581737 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
CSNK1D-220ENST00000581737 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
CSNK1D-220ENST00000581737 ALDH1L1O75891 902 aa17■□□□□ 0.31
CSNK1D-220ENST00000581737 IGKV5-2P06315 115 aa17■□□□□ 0.31
CSNK1D-220ENST00000581737 ZKSCAN2Q63HK3 967 aa17■□□□□ 0.31
CSNK1D-220ENST00000581737 MASTLQ96GX5 879 aa17■□□□□ 0.31
CSNK1D-220ENST00000581737 SRCIN1Q9C0H9 1055 aa17■□□□□ 0.31
CSNK1D-220ENST00000581737 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
CSNK1D-220ENST00000581737 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
CSNK1D-220ENST00000581737 LBX1P52954 281 aa16.99■□□□□ 0.31
CSNK1D-220ENST00000581737 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
CSNK1D-220ENST00000581737 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
CSNK1D-220ENST00000581737 ZBTB38Q8NAP3 1195 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-220ENST00000581737 WBP1LQ9NX94 342 aa16.99■□□□□ 0.31
CSNK1D-220ENST00000581737 ABCC12Q96J65 1359 aa16.99■□□□□ 0.31
CSNK1D-220ENST00000581737 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 MS4A1P11836 297 aa16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 CCT4P50991 539 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 GCKRQ14397 625 aa16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 CWF19L2Q2TBE0 894 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
CSNK1D-220ENST00000581737 ABCC4O15439 1325 aa16.97■□□□□ 0.31
CSNK1D-220ENST00000581737 IQCA1LA6NCM1 817 aa16.97■□□□□ 0.31
CSNK1D-220ENST00000581737 TRIM27P14373 513 aa16.97■□□□□ 0.31
CSNK1D-220ENST00000581737 CTCFP49711 727 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-220ENST00000581737 MAP1SQ66K74 1059 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-220ENST00000581737 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.31
CSNK1D-220ENST00000581737 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
CSNK1D-220ENST00000581737 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
CSNK1D-220ENST00000581737 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.31
CSNK1D-220ENST00000581737 FAM89AQ96GI7 184 aa16.96■□□□□ 0.31
CSNK1D-220ENST00000581737 ADAMTSL1Q8N6G6 1762 aa16.96■□□□□ 0.31
CSNK1D-220ENST00000581737 CDHR2Q9BYE9 1310 aa16.96■□□□□ 0.3
CSNK1D-220ENST00000581737 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 HSPA8P11142 646 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.35e-7■□□□□ 8.6
CSNK1D-220ENST00000581737 FMR1Q06787 632 aaKnown RBP eCLIP16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 CCDC93Q567U6 631 aa16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 SOGA3Q5TF21 947 aa16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 NLRP3Q96P20 1036 aa16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 C9orf78Q9NZ63 289 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 MYH3P11055 1940 aa16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 CACNA1SQ13698 1873 aa16.95■□□□□ 0.3
CSNK1D-220ENST00000581737 RASSF10A6NK89 507 aa16.94■□□□□ 0.3
CSNK1D-220ENST00000581737 GRM8O00222 908 aa16.94■□□□□ 0.3
CSNK1D-220ENST00000581737 IRS4O14654 1257 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-220ENST00000581737 EPHX2P34913 555 aa16.94■□□□□ 0.3
CSNK1D-220ENST00000581737 UBE3BQ7Z3V4 1068 aa16.94■□□□□ 0.3
CSNK1D-220ENST00000581737 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
CSNK1D-220ENST00000581737 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
CSNK1D-220ENST00000581737 H7C1W4 665 aa16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 NPR1P16066 1061 aa16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 DZIP1LQ8IYY4 767 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 CNTROBQ8N137 903 aa16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 COL4A5P29400 1685 aa16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 SNED1Q8TER0 1413 aa16.93■□□□□ 0.3
CSNK1D-220ENST00000581737 FZD9O00144 591 aa16.92■□□□□ 0.3
CSNK1D-220ENST00000581737 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-220ENST00000581737 AAMPQ13685 434 aa16.92■□□□□ 0.3
CSNK1D-220ENST00000581737 CRY2Q49AN0 593 aa16.92■□□□□ 0.3
CSNK1D-220ENST00000581737 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-220ENST00000581737 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
CSNK1D-220ENST00000581737 HDAC5Q9UQL6 1122 aa16.92■□□□□ 0.3
CSNK1D-220ENST00000581737 SCN4AP35499 1836 aa16.91■□□□□ 0.3
CSNK1D-220ENST00000581737 PDE8AO60658 829 aa16.91■□□□□ 0.3
CSNK1D-220ENST00000581737 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
CSNK1D-220ENST00000581737 DEFB115Q30KQ5 88 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms