RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, human

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-208	ENST00000581709	RPS8	P62241	208 aa	Known RBP	11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	FOXO4	P98177	505 aa		11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	PDE3A	Q14432	1141 aa		11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	SOGA3	Q5TF21	947 aa		11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	PRPF40B	Q6NWY9	871 aa	Known RBP	11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	ITPRIP	Q8IWB1	547 aa		11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	CHMP4B	Q9H444	224 aa	Known RBP	11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	TNN	Q9UQP3	1299 aa		11.21	□□□□□ -0.61
RTTN-208	ENST00000581709	C21orf2	O43822	256 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	YBX3	P16989	372 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	IFIT5	Q13325	482 aa	Known RBP	11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	GRAP	Q13588	217 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	CCDC57	Q2TAC2	916 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	GRIPAP1	Q4V328	841 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	CC2D2B	Q6DHV5	1058 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	LMBR1L	Q6UX01	489 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	ARHGAP27	Q6ZUM4	889 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	TMC4	Q7Z404	712 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	GRAPL	Q8TC17	118 aa	Predicted RBP	11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	PANK1	Q8TE04	598 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	CDC5L	Q99459	802 aa	Known RBP	11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	CHMP3	Q9Y3E7	222 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	NUP98	P52948	1817 aa		11.2	□□□□□ -0.62
RTTN-208	ENST00000581709	ANKRD18B	A2A2Z9	1011 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	ZBTB7B	O15156	539 aa	Predicted RBP	11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	GNAI2	P04899	355 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	RLBP1	P12271	317 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	ANKRD18A	Q8IVF6	992 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	RTKN2	Q8IZC4	609 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	SUCLG2	Q96I99	432 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	MEIS3	Q99687	375 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	GREM2	Q9H772	168 aa		11.19	□□□□□ -0.62
RTTN-208	ENST00000581709	CACNA1F	O60840	1977 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	PPEF1	O14829	653 aa	Predicted RBP	11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	ITGA6	P23229	1130 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	IGHMBP2	P38935	993 aa	Known RBP	11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	TAF7L	Q5H9L4	462 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	SP8	Q8IXZ3	490 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	C7orf43	Q8WVR3	580 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	KAZALD1	Q96I82	304 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	MPHOSPH8	Q99549	860 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	BICC1	Q9H694	974 aa	Known RBP	11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	SEC31B	Q9NQW1	1179 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	DDX19B	Q9UMR2	479 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	ATP6V0A2	Q9Y487	856 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	NRXN2	Q9P2S2	1712 aa		11.18	□□□□□ -0.62
RTTN-208	ENST00000581709	ZBTB22	O15209	634 aa		11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	RRP1	P56182	461 aa	Known RBP	11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	MVP	Q14764	893 aa	Known RBP	11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	RABL6	Q3YEC7	729 aa	Predicted RBP	11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	CCDC93	Q567U6	631 aa		11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	EPHA10	Q5JZY3	1008 aa		11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	CELF1	Q92879	486 aa	Known RBP	11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	COG6	Q9Y2V7	657 aa		11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	LRRFIP2	Q9Y608	721 aa	Known RBP	11.17	□□□□□ -0.62
RTTN-208	ENST00000581709	ARFGEF2	Q9Y6D5	1785 aa		11.16	□□□□□ -0.62
RTTN-208	ENST00000581709	FAM161A	Q3B820	660 aa		11.16	□□□□□ -0.62
RTTN-208	ENST00000581709	BSDC1	Q9NW68	430 aa	Predicted RBP	11.16	□□□□□ -0.62
RTTN-208	ENST00000581709	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.16	□□□□□ -0.62
RTTN-208	ENST00000581709	RTL9	Q8NET4	1388 aa		11.16	□□□□□ -0.62
RTTN-208	ENST00000581709	C20orf194	Q5TEA3	1177 aa		11.15	□□□□□ -0.62
RTTN-208	ENST00000581709	LDHAL6A	Q6ZMR3	332 aa		11.15	□□□□□ -0.62
RTTN-208	ENST00000581709	MPND	Q8N594	471 aa		11.15	□□□□□ -0.62
RTTN-208	ENST00000581709	ANKRD44	Q8N8A2	993 aa		11.15	□□□□□ -0.62
RTTN-208	ENST00000581709	ANKIB1	Q9P2G1	1089 aa		11.15	□□□□□ -0.62
RTTN-208	ENST00000581709	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.15	□□□□□ -0.62
RTTN-208	ENST00000581709	AFDN	P55196	1824 aa	Known RBP	11.14	□□□□□ -0.63
RTTN-208	ENST00000581709	OLFM4	Q6UX06	510 aa		11.14	□□□□□ -0.63
RTTN-208	ENST00000581709	DPP8	Q6V1X1	898 aa	Predicted RBP	11.14	□□□□□ -0.63
RTTN-208	ENST00000581709	SUPT20H	Q8NEM7	779 aa		11.14	□□□□□ -0.63
RTTN-208	ENST00000581709	TAOK3	Q9H2K8	898 aa		11.14	□□□□□ -0.63
RTTN-208	ENST00000581709	CNNM1	Q9NRU3	951 aa		11.14	□□□□□ -0.63
RTTN-208	ENST00000581709	SRGAP3	O43295	1099 aa		11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	CENPB	P07199	599 aa	Predicted RBP	11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	PSMD1	Q99460	953 aa		11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	ANKRD2	Q9GZV1	360 aa		11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	VPS33B	Q9H267	617 aa		11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	ZBTB40	Q9NUA8	1239 aa		11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	MINPP1	Q9UNW1	487 aa		11.13	□□□□□ -0.63
RTTN-208	ENST00000581709	KIF13B	Q9NQT8	1826 aa		11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	C6orf229	H3BNL8	230 aa		11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	LMNB1	P20700	586 aa		11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	ATP8B2	P98198	1209 aa		11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	MTX1	Q13505	466 aa		11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	ZNF594	Q96JF6	807 aa	Predicted RBP	11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	PODXL2	Q9NZ53	605 aa		11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	ANKRD36C	Q5JPF3	1778 aa		11.12	□□□□□ -0.63
RTTN-208	ENST00000581709	NFKBIE	O00221	500 aa		11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	ATP2B4	P23634	1241 aa		11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	GPSM2	P81274	684 aa		11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	EYA3	Q99504	573 aa		11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	C1orf115	Q9H7X2	142 aa		11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	GGA1	Q9UJY5	639 aa		11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	FBXO3	Q9UK99	471 aa		11.11	□□□□□ -0.63
RTTN-208	ENST00000581709	XDH	P47989	1333 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms