RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 WDR90Q96KV7 1748 aa25.92■■□□□ 1.74
SNX11-209ENST00000581705 SMC1BQ8NDV3 1235 aa25.91■■□□□ 1.74
SNX11-209ENST00000581705 RPGRQ92834 1020 aaKnown RBP25.91■■□□□ 1.74
SNX11-209ENST00000581705 AIMP1Q12904 312 aaKnown RBP25.9■■□□□ 1.74
SNX11-209ENST00000581705 HSP90AB3PQ58FF7 597 aa25.9■■□□□ 1.74
SNX11-209ENST00000581705 INTS3Q68E01 1043 aaKnown RBP25.9■■□□□ 1.74
SNX11-209ENST00000581705 UTP14AQ9BVJ6 771 aaKnown RBP25.9■■□□□ 1.74
SNX11-209ENST00000581705 TNNQ9UQP3 1299 aa25.9■■□□□ 1.74
SNX11-209ENST00000581705 G2E3Q7L622 706 aa25.89■■□□□ 1.74
SNX11-209ENST00000581705 TMEM57Q8N5G2 664 aa25.89■■□□□ 1.74
SNX11-209ENST00000581705 ZNF277Q9NRM2 450 aaPredicted RBP25.89■■□□□ 1.74
SNX11-209ENST00000581705 SNED1Q8TER0 1413 aa25.89■■□□□ 1.74
SNX11-209ENST00000581705 SLC10A5Q5PT55 438 aa25.88■■□□□ 1.73
SNX11-209ENST00000581705 C3orf67Q6ZVT6 689 aa25.88■■□□□ 1.73
SNX11-209ENST00000581705 CRAMP1Q96RY5 1269 aa25.88■■□□□ 1.73
SNX11-209ENST00000581705 FKBP5Q13451 457 aaPredicted RBP25.88■■□□□ 1.73
SNX11-209ENST00000581705 CC2D2BQ6DHV5 1058 aa25.88■■□□□ 1.73
SNX11-209ENST00000581705 DNAJC5GQ8N7S2 189 aa25.88■■□□□ 1.73
SNX11-209ENST00000581705 DDNO94850 711 aaPredicted RBP25.87■■□□□ 1.73
SNX11-209ENST00000581705 CCT4P50991 539 aaKnown RBP25.87■■□□□ 1.73
SNX11-209ENST00000581705 TCIRG1Q13488 830 aa25.87■■□□□ 1.73
SNX11-209ENST00000581705 NLRP10Q86W26 655 aa25.87■■□□□ 1.73
SNX11-209ENST00000581705 ITPRIPQ8IWB1 547 aa25.87■■□□□ 1.73
SNX11-209ENST00000581705 RBM17Q96I25 401 aaKnown RBP25.87■■□□□ 1.73
SNX11-209ENST00000581705 NLRP3Q96P20 1036 aa25.87■■□□□ 1.73
SNX11-209ENST00000581705 SYNE4Q8N205 404 aa25.86■■□□□ 1.73
SNX11-209ENST00000581705 PSMD1Q99460 953 aa25.86■■□□□ 1.73
SNX11-209ENST00000581705 ANKRD36CQ5JPF3 1778 aa25.86■■□□□ 1.73
SNX11-209ENST00000581705 DDX58O95786 925 aaKnown RBP25.85■■□□□ 1.73
SNX11-209ENST00000581705 IARSP41252 1262 aaKnown RBP25.84■■□□□ 1.73
SNX11-209ENST00000581705 CCDC136Q96JN2 1154 aa25.84■■□□□ 1.73
SNX11-209ENST00000581705 PHAXQ9H814 394 aaKnown RBP25.84■■□□□ 1.73
SNX11-209ENST00000581705 GRIPAP1Q4V328 841 aa25.83■■□□□ 1.73
SNX11-209ENST00000581705 PLBD2Q8NHP8 589 aa25.83■■□□□ 1.73
SNX11-209ENST00000581705 L3MBTL3Q96JM7 780 aaPredicted RBP25.82■■□□□ 1.72
SNX11-209ENST00000581705 PPEF1O14829 653 aaPredicted RBP25.81■■□□□ 1.72
SNX11-209ENST00000581705 ANKRD13DQ6ZTN6 518 aa25.81■■□□□ 1.72
SNX11-209ENST00000581705 TRMT112Q9UI30 125 aaKnown RBP25.81■■□□□ 1.72
SNX11-209ENST00000581705 HTRA3P83110 453 aa25.8■■□□□ 1.72
SNX11-209ENST00000581705 KSR2Q6VAB6 950 aa25.8■■□□□ 1.72
SNX11-209ENST00000581705 ZNF541Q9H0D2 1346 aa25.8■■□□□ 1.72
SNX11-209ENST00000581705 FZD9O00144 591 aa25.8■■□□□ 1.72
SNX11-209ENST00000581705 ZBTB7BO15156 539 aaPredicted RBP25.8■■□□□ 1.72
SNX11-209ENST00000581705 DNAAF4Q8WXU2 420 aa25.8■■□□□ 1.72
SNX11-209ENST00000581705 ZBTB40Q9NUA8 1239 aa25.8■■□□□ 1.72
SNX11-209ENST00000581705 SH3TC1Q8TE82 1336 aa25.79■■□□□ 1.72
SNX11-209ENST00000581705 IQCA1LA6NCM1 817 aa25.79■■□□□ 1.72
SNX11-209ENST00000581705 HCLS1P14317 486 aaPredicted RBP25.79■■□□□ 1.72
SNX11-209ENST00000581705 SLC51AQ86UW1 340 aa25.78■■□□□ 1.72
SNX11-209ENST00000581705 ISCA1Q9BUE6 129 aa25.78■■□□□ 1.72
SNX11-209ENST00000581705 PI4KAP2A4QPH2 592 aa25.77■■□□□ 1.72
SNX11-209ENST00000581705 PI4KAP1Q8N8J0 262 aa25.77■■□□□ 1.72
SNX11-209ENST00000581705 JDP2Q8WYK2 163 aa25.77■■□□□ 1.72
SNX11-209ENST00000581705 ATP6V0A2Q9Y487 856 aa25.77■■□□□ 1.72
SNX11-209ENST00000581705 F6X3S4 739 aa25.76■■□□□ 1.71
SNX11-209ENST00000581705 BBOX1O75936 387 aa25.75■■□□□ 1.71
SNX11-209ENST00000581705 B4GALNT3Q6L9W6 998 aa25.75■■□□□ 1.71
SNX11-209ENST00000581705 CHADLQ6NUI6 762 aa25.75■■□□□ 1.71
SNX11-209ENST00000581705 KLRG1Q96E93 195 aa25.75■■□□□ 1.71
SNX11-209ENST00000581705 TAF1DQ9H5J8 278 aaPredicted RBP25.75■■□□□ 1.71
SNX11-209ENST00000581705 SCN4AP35499 1836 aa25.75■■□□□ 1.71
SNX11-209ENST00000581705 POTEIP0CG38 1075 aa25.74■■□□□ 1.71
SNX11-209ENST00000581705 POTEJP0CG39 1038 aa25.74■■□□□ 1.71
SNX11-209ENST00000581705 SLC4A10Q6U841 1118 aa25.74■■□□□ 1.71
SNX11-209ENST00000581705 TMX4Q9H1E5 349 aaPredicted RBP25.74■■□□□ 1.71
SNX11-209ENST00000581705 LAMB2P55268 1798 aa25.74■■□□□ 1.71
SNX11-209ENST00000581705 COL4A5P29400 1685 aa25.74■■□□□ 1.71
SNX11-209ENST00000581705 ATP5J2-PTCD1G3V325 749 aa25.73■■□□□ 1.71
SNX11-209ENST00000581705 ALDH1L1O75891 902 aa25.73■■□□□ 1.71
SNX11-209ENST00000581705 TRIM28Q13263 835 aaKnown RBP25.73■■□□□ 1.71
SNX11-209ENST00000581705 GPC2Q8N158 579 aa25.73■■□□□ 1.71
SNX11-209ENST00000581705 SRCIN1Q9C0H9 1055 aa25.73■■□□□ 1.71
SNX11-209ENST00000581705 BEND3Q5T5X7 828 aa25.72■■□□□ 1.71
SNX11-209ENST00000581705 DDX46Q7L014 1031 aaKnown RBP25.72■■□□□ 1.71
SNX11-209ENST00000581705 LARGE2Q8N3Y3 721 aa25.72■■□□□ 1.71
SNX11-209ENST00000581705 MAP3K2Q9Y2U5 619 aa25.72■■□□□ 1.71
SNX11-209ENST00000581705 RIC3Q7Z5B4 369 aa25.71■■□□□ 1.71
SNX11-209ENST00000581705 SP8Q8IXZ3 490 aa25.71■■□□□ 1.71
SNX11-209ENST00000581705 FAM89AQ96GI7 184 aa25.71■■□□□ 1.71
SNX11-209ENST00000581705 HACL1Q9UJ83 578 aa25.71■■□□□ 1.71
SNX11-209ENST00000581705 GNAI3P08754 354 aa25.71■■□□□ 1.71
SNX11-209ENST00000581705 EIF6P56537 245 aaKnown RBP25.71■■□□□ 1.71
SNX11-209ENST00000581705 LDHDQ86WU2 507 aa25.71■■□□□ 1.71
SNX11-209ENST00000581705 LINS1Q8NG48 757 aa25.71■■□□□ 1.71
SNX11-209ENST00000581705 NEXNQ0ZGT2 675 aa25.7■■□□□ 1.7
SNX11-209ENST00000581705 GRAPQ13588 217 aa25.7■■□□□ 1.7
SNX11-209ENST00000581705 JMYQ8N9B5 988 aa25.7■■□□□ 1.7
SNX11-209ENST00000581705 GRAPLQ8TC17 118 aaPredicted RBP25.7■■□□□ 1.7
SNX11-209ENST00000581705 METTL22Q9BUU2 404 aaPredicted RBP25.7■■□□□ 1.7
SNX11-209ENST00000581705 RTFDC1Q9BY42 306 aaPredicted RBP25.7■■□□□ 1.7
SNX11-209ENST00000581705 VPS33BQ9H267 617 aa25.7■■□□□ 1.7
SNX11-209ENST00000581705 CENPQQ7L2Z9 268 aaPredicted RBP25.69■■□□□ 1.7
SNX11-209ENST00000581705 HDAC5Q9UQL6 1122 aa25.69■■□□□ 1.7
SNX11-209ENST00000581705 DDX60Q8IY21 1712 aaKnown RBP25.68■■□□□ 1.7
SNX11-209ENST00000581705 EPHX2P34913 555 aa25.68■■□□□ 1.7
SNX11-209ENST00000581705 SF3B3Q15393 1217 aaKnown RBP25.68■■□□□ 1.7
SNX11-209ENST00000581705 PPIP5K2O43314 1243 aa25.67■■□□□ 1.7
SNX11-209ENST00000581705 HDAC1Q13547 482 aaPredicted RBP25.67■■□□□ 1.7
SNX11-209ENST00000581705 NIM1KQ8IY84 436 aa25.67■■□□□ 1.7
SNX11-209ENST00000581705 SUPT20HQ8NEM7 779 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms