RNA–Protein interactions for RNA: ENST00000581047.2

RN7SL557P-201, Transcript of RNA, 7SL, cytoplasmic 557, pseudogene, humanhuman

BASIC

Gene RN7SL557P, Length 286 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL557P-201ENST00000581047 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 KCNA3P22001 575 aa11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 CHRNA5P30532 468 aa11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 RPGRQ92834 1020 aaKnown RBP11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 MEIS3Q99687 375 aa11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 SRCAPQ6ZRS2 3230 aa11.89□□□□□ -0.51
RN7SL557P-201ENST00000581047 COL4A1P02462 1669 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 FOXO4P98177 505 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 CNKSR1Q969H4 720 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 KAZALD1Q96I82 304 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 CRAMP1Q96RY5 1269 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
RN7SL557P-201ENST00000581047 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 CSF1RP07333 972 aa11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 ALDH1B1P30837 517 aa11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 C20orf194Q5TEA3 1177 aa11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 COG6Q9Y2V7 657 aa11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 CCDC88AQ3V6T2 1871 aa11.87□□□□□ -0.51
RN7SL557P-201ENST00000581047 LTBP1Q14766 1721 aa11.86□□□□□ -0.51
RN7SL557P-201ENST00000581047 EPHA10Q5JZY3 1008 aa11.86□□□□□ -0.51
RN7SL557P-201ENST00000581047 DDX46Q7L014 1031 aaKnown RBP11.86□□□□□ -0.51
RN7SL557P-201ENST00000581047 TTLL6Q8N841 843 aa11.86□□□□□ -0.51
RN7SL557P-201ENST00000581047 ANKRD44Q8N8A2 993 aa11.86□□□□□ -0.51
RN7SL557P-201ENST00000581047 ZNF622Q969S3 477 aaKnown RBP eCLIP11.86□□□□□ -0.51
RN7SL557P-201ENST00000581047 BICC1Q9H694 974 aaKnown RBP11.86□□□□□ -0.51
RN7SL557P-201ENST00000581047 SBF1O95248 1867 aa11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 GNAI2P04899 355 aa11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 GRAPQ13588 217 aa11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 TMC4Q7Z404 712 aa11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 GRAPLQ8TC17 118 aaPredicted RBP11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 DICER1Q9UPY3 1922 aaKnown RBP11.85□□□□□ -0.51
RN7SL557P-201ENST00000581047 CHD4Q14839 1912 aa11.84□□□□□ -0.51
RN7SL557P-201ENST00000581047 MTX1Q13505 466 aa11.84□□□□□ -0.51
RN7SL557P-201ENST00000581047 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
RN7SL557P-201ENST00000581047 CDC5LQ99459 802 aaKnown RBP11.84□□□□□ -0.51
RN7SL557P-201ENST00000581047 GREM2Q9H772 168 aa11.84□□□□□ -0.51
RN7SL557P-201ENST00000581047 ZBTB40Q9NUA8 1239 aa11.84□□□□□ -0.51
RN7SL557P-201ENST00000581047 ANKRD18BA2A2Z9 1011 aa11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 BBOX1O75936 387 aa11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 ITGA6P23229 1130 aa11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 IFIT5Q13325 482 aaKnown RBP11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 CHMP3Q9Y3E7 222 aa11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 SNED1Q8TER0 1413 aa11.83□□□□□ -0.52
RN7SL557P-201ENST00000581047 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 SOGA3Q5TF21 947 aa11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 BCS1LQ9Y276 419 aa11.82□□□□□ -0.52
RN7SL557P-201ENST00000581047 DUOX1Q9NRD9 1551 aa11.81□□□□□ -0.52
RN7SL557P-201ENST00000581047 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
RN7SL557P-201ENST00000581047 AAMPQ13685 434 aa11.81□□□□□ -0.52
RN7SL557P-201ENST00000581047 GRIPAP1Q4V328 841 aa11.81□□□□□ -0.52
RN7SL557P-201ENST00000581047 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
RN7SL557P-201ENST00000581047 CRBNQ96SW2 442 aa11.81□□□□□ -0.52
RN7SL557P-201ENST00000581047 YBX3P16989 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 RFX5P48382 616 aaPredicted RBP11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 SP8Q8IXZ3 490 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 BSDC1Q9NW68 430 aaPredicted RBP11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 ATP6V0A2Q9Y487 856 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 TIAM2Q8IVF5 1701 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
RN7SL557P-201ENST00000581047 SRGAP3O43295 1099 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 C21orf2O43822 256 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 GPR162Q16538 588 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 MPHOSPH8Q99549 860 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 WWC3Q9ULE0 1092 aa11.79□□□□□ -0.52
RN7SL557P-201ENST00000581047 PNMA6EA0A0J9YXQ4 647 aa11.78□□□□□ -0.52
RN7SL557P-201ENST00000581047 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
RN7SL557P-201ENST00000581047 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
RN7SL557P-201ENST00000581047 POLA2Q14181 598 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms