RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
SENP3-205ENST00000581010 PPP1R42Q7Z4L9 355 aa9.23□□□□□ -0.93
SENP3-205ENST00000581010 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
SENP3-205ENST00000581010 SUCLG2Q96I99 432 aa9.23□□□□□ -0.93
SENP3-205ENST00000581010 BICC1Q9H694 974 aaKnown RBP9.23□□□□□ -0.93
SENP3-205ENST00000581010 PRDM10Q9NQV6 1147 aa9.23□□□□□ -0.93
SENP3-205ENST00000581010 MKRN1Q9UHC7 482 aaKnown RBP9.23□□□□□ -0.93
SENP3-205ENST00000581010 TRMT112Q9UI30 125 aaKnown RBP9.23□□□□□ -0.93
SENP3-205ENST00000581010 NIP7Q9Y221 180 aaKnown RBP eCLIP9.23□□□□□ -0.93
SENP3-205ENST00000581010 UTYO14607 1347 aa9.23□□□□□ -0.93
SENP3-205ENST00000581010 TIAM2Q8IVF5 1701 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 TNRC18O15417 2968 aaPredicted RBP9.22□□□□□ -0.93
SENP3-205ENST00000581010 A0A0G2JLW4 131 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 FAM177BA6PVY3 158 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 SURF6O75683 361 aaKnown RBP9.22□□□□□ -0.93
SENP3-205ENST00000581010 ADRA2BP18089 450 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 TAF7LQ5H9L4 462 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 CHD1LQ86WJ1 897 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 ERC1Q8IUD2 1116 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 SIRT2Q8IXJ6 389 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 FLAD1Q8NFF5 587 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 JARID2Q92833 1246 aaPredicted RBP9.22□□□□□ -0.93
SENP3-205ENST00000581010 ISCA1Q9BUE6 129 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 LNPKQ9C0E8 428 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 RNF181Q9P0P0 153 aa9.22□□□□□ -0.93
SENP3-205ENST00000581010 PNMA6EA0A0J9YXQ4 647 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 RAB11FIP3O75154 756 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 CAMTA2O94983 1202 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 PCCAP05165 728 aaPredicted RBP9.21□□□□□ -0.94
SENP3-205ENST00000581010 NUCB1Q02818 461 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 TRIM28Q13263 835 aaKnown RBP9.21□□□□□ -0.94
SENP3-205ENST00000581010 G3BP1Q13283 466 aaKnown RBP eCLIP9.21□□□□□ -0.94
SENP3-205ENST00000581010 CLEC4GQ6UXB4 293 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 BICDL1Q6ZP65 573 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 NLRP10Q86W26 655 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 ZBTB38Q8NAP3 1195 aaPredicted RBP9.21□□□□□ -0.94
SENP3-205ENST00000581010 UTP14AQ9BVJ6 771 aaKnown RBP9.21□□□□□ -0.94
SENP3-205ENST00000581010 LRRCC1Q9C099 1032 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 DCTPP1Q9H773 170 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 NARFQ9UHQ1 456 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 EXOC6BQ9Y2D4 811 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 SH3TC1Q8TE82 1336 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 LAMB2P55268 1798 aa9.21□□□□□ -0.94
SENP3-205ENST00000581010 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 H7C1W4 665 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 SSFA2P28290 1259 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 LBX1P52954 281 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 CCDC57Q2TAC2 916 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 USPL1Q5W0Q7 1092 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 SSH3Q8TE77 659 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 FAM89AQ96GI7 184 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 SETDB2Q96T68 719 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 NYXQ9GZU5 481 aa9.2□□□□□ -0.94
SENP3-205ENST00000581010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
SENP3-205ENST00000581010 IRS4O14654 1257 aaPredicted RBP9.19□□□□□ -0.94
SENP3-205ENST00000581010 RGL2O15211 777 aa9.19□□□□□ -0.94
SENP3-205ENST00000581010 DPEP1P16444 411 aa9.19□□□□□ -0.94
SENP3-205ENST00000581010 CTCFP49711 727 aaPredicted RBP9.19□□□□□ -0.94
SENP3-205ENST00000581010 MTX1Q13505 466 aa9.19□□□□□ -0.94
SENP3-205ENST00000581010 POLA2Q14181 598 aa9.19□□□□□ -0.94
SENP3-205ENST00000581010 LMBR1LQ6UX01 489 aa9.19□□□□□ -0.94
SENP3-205ENST00000581010 ZNF34Q8IZ26 560 aa9.19□□□□□ -0.94
SENP3-205ENST00000581010 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
SENP3-205ENST00000581010 SRP68Q9UHB9 627 aaKnown RBP9.19□□□□□ -0.94
SENP3-205ENST00000581010 CDHR2Q9BYE9 1310 aa9.19□□□□□ -0.94
SENP3-205ENST00000581010 MMP10P09238 476 aa9.18□□□□□ -0.94
SENP3-205ENST00000581010 IFIT5Q13325 482 aaKnown RBP9.18□□□□□ -0.94
SENP3-205ENST00000581010 UBN2Q6ZU65 1347 aa9.18□□□□□ -0.94
SENP3-205ENST00000581010 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
SENP3-205ENST00000581010 NBPF5PQ86XG9 351 aaPredicted RBP9.18□□□□□ -0.94
SENP3-205ENST00000581010 CLASRPQ8N2M8 674 aaKnown RBP9.18□□□□□ -0.94
SENP3-205ENST00000581010 AIDAQ96BJ3 306 aa9.18□□□□□ -0.94
SENP3-205ENST00000581010 KIF1BPQ96EK5 621 aa9.18□□□□□ -0.94
SENP3-205ENST00000581010 GPATCH3Q96I76 525 aa9.18□□□□□ -0.94
SENP3-205ENST00000581010 SIL1Q9H173 461 aa9.18□□□□□ -0.94
SENP3-205ENST00000581010 USP42Q9H9J4 1324 aaKnown RBP9.18□□□□□ -0.94
SENP3-205ENST00000581010 DDX60Q8IY21 1712 aaKnown RBP9.17□□□□□ -0.94
SENP3-205ENST00000581010 CARMIL3Q8ND23 1372 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 ANKRD18BA2A2Z9 1011 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 SMARCA5O60264 1052 aaPredicted RBP9.17□□□□□ -0.94
SENP3-205ENST00000581010 PDE8AO60658 829 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 IFIT2P09913 472 aaKnown RBP9.17□□□□□ -0.94
SENP3-205ENST00000581010 RGS19P49795 217 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 CTSWP56202 376 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 SUSD4Q5VX71 490 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 TBC1D9BQ66K14 1250 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 TPTE2Q6XPS3 522 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 RHPN1Q8TCX5 695 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
SENP3-205ENST00000581010 SPEF2Q9C093 1822 aa9.17□□□□□ -0.94
SENP3-205ENST00000581010 CASP7P55210 303 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 TGFB2P61812 414 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 FOXO4P98177 505 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 RABL6Q3YEC7 729 aaPredicted RBP9.16□□□□□ -0.94
SENP3-205ENST00000581010 CCDC152Q4G0S7 254 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 EPHA10Q5JZY3 1008 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 KAZALD1Q96I82 304 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 PLA2G12BQ9BX93 195 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 IL1RAPL2Q9NP60 686 aa9.16□□□□□ -0.94
SENP3-205ENST00000581010 PA2G4Q9UQ80 394 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms