RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 HCLS1P14317 486 aaPredicted RBP13.44□□□□□ -0.26
GGA3-210ENST00000580799 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
GGA3-210ENST00000580799 GRAPQ13588 217 aa13.44□□□□□ -0.26
GGA3-210ENST00000580799 CST9Q5W186 159 aa13.44□□□□□ -0.26
GGA3-210ENST00000580799 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
GGA3-210ENST00000580799 GRAPLQ8TC17 118 aaPredicted RBP13.44□□□□□ -0.26
GGA3-210ENST00000580799 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
GGA3-210ENST00000580799 BEGAINQ9BUH8 593 aa13.44□□□□□ -0.26
GGA3-210ENST00000580799 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
GGA3-210ENST00000580799 DDX60Q8IY21 1712 aaKnown RBP13.44□□□□□ -0.26
GGA3-210ENST00000580799 TRAF5O00463 557 aa13.43□□□□□ -0.26
GGA3-210ENST00000580799 HOXB7P09629 217 aa13.43□□□□□ -0.26
GGA3-210ENST00000580799 GMPSP49915 693 aaPredicted RBP13.43□□□□□ -0.26
GGA3-210ENST00000580799 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
GGA3-210ENST00000580799 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
GGA3-210ENST00000580799 GPR101Q96P66 508 aaPredicted RBP13.43□□□□□ -0.26
GGA3-210ENST00000580799 DUOX1Q9NRD9 1551 aa13.43□□□□□ -0.26
GGA3-210ENST00000580799 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
GGA3-210ENST00000580799 MAP2K2P36507 400 aa13.42□□□□□ -0.26
GGA3-210ENST00000580799 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.26
GGA3-210ENST00000580799 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
GGA3-210ENST00000580799 HHIPL1Q96JK4 782 aa13.42□□□□□ -0.26
GGA3-210ENST00000580799 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
GGA3-210ENST00000580799 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
GGA3-210ENST00000580799 CYP4F22Q6NT55 531 aa13.41□□□□□ -0.26
GGA3-210ENST00000580799 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
GGA3-210ENST00000580799 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
GGA3-210ENST00000580799 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
GGA3-210ENST00000580799 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
GGA3-210ENST00000580799 TAF1P21675 1872 aa13.41□□□□□ -0.26
GGA3-210ENST00000580799 CA12O43570 354 aa13.4□□□□□ -0.26
GGA3-210ENST00000580799 RAD17O75943 681 aa13.4□□□□□ -0.26
GGA3-210ENST00000580799 CELF2O95319 508 aaKnown RBP13.4□□□□□ -0.26
GGA3-210ENST00000580799 GRM1Q13255 1194 aa13.4□□□□□ -0.26
GGA3-210ENST00000580799 NEUROD2Q15784 382 aa13.4□□□□□ -0.26
GGA3-210ENST00000580799 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
GGA3-210ENST00000580799 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
GGA3-210ENST00000580799 ABHD8Q96I13 439 aa13.4□□□□□ -0.26
GGA3-210ENST00000580799 H7C1D1 291 aa13.39□□□□□ -0.27
GGA3-210ENST00000580799 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
GGA3-210ENST00000580799 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
GGA3-210ENST00000580799 KRT24Q2M2I5 525 aa13.39□□□□□ -0.27
GGA3-210ENST00000580799 CDC37L1Q7L3B6 337 aa13.39□□□□□ -0.27
GGA3-210ENST00000580799 DPF2Q92785 391 aa13.39□□□□□ -0.27
GGA3-210ENST00000580799 ISCA1Q9BUE6 129 aa13.39□□□□□ -0.27
GGA3-210ENST00000580799 GLIS2Q9BZE0 524 aaPredicted RBP13.39□□□□□ -0.27
GGA3-210ENST00000580799 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
GGA3-210ENST00000580799 CNOT7Q9UIV1 285 aaKnown RBP13.39□□□□□ -0.27
GGA3-210ENST00000580799 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
GGA3-210ENST00000580799 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
GGA3-210ENST00000580799 YDJCA8MPS7 323 aa13.38□□□□□ -0.27
GGA3-210ENST00000580799 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
GGA3-210ENST00000580799 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
GGA3-210ENST00000580799 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
GGA3-210ENST00000580799 CCDC146Q8IYE0 955 aa13.38□□□□□ -0.27
GGA3-210ENST00000580799 FAM89AQ96GI7 184 aa13.38□□□□□ -0.27
GGA3-210ENST00000580799 NSFL1CQ9UNZ2 370 aaKnown RBP13.38□□□□□ -0.27
GGA3-210ENST00000580799 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
GGA3-210ENST00000580799 RPS12P25398 132 aaKnown RBP13.37□□□□□ -0.27
GGA3-210ENST00000580799 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
GGA3-210ENST00000580799 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
GGA3-210ENST00000580799 TRPM4Q8TD43 1214 aa13.37□□□□□ -0.27
GGA3-210ENST00000580799 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
GGA3-210ENST00000580799 AOC2O75106 756 aa13.36□□□□□ -0.27
GGA3-210ENST00000580799 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
GGA3-210ENST00000580799 EYA3Q99504 573 aa13.36□□□□□ -0.27
GGA3-210ENST00000580799 ATP5J2-PTCD1G3V325 749 aa13.35□□□□□ -0.27
GGA3-210ENST00000580799 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
GGA3-210ENST00000580799 PSMD14O00487 310 aa13.35□□□□□ -0.27
GGA3-210ENST00000580799 NOGQ13253 232 aa13.35□□□□□ -0.27
GGA3-210ENST00000580799 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
GGA3-210ENST00000580799 ZNF408Q9H9D4 720 aa13.35□□□□□ -0.27
GGA3-210ENST00000580799 IRS4O14654 1257 aaPredicted RBP13.34□□□□□ -0.27
GGA3-210ENST00000580799 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
GGA3-210ENST00000580799 GPSM2P81274 684 aa13.34□□□□□ -0.27
GGA3-210ENST00000580799 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
GGA3-210ENST00000580799 POLLQ9UGP5 575 aa13.34□□□□□ -0.27
GGA3-210ENST00000580799 ADAMTS8Q9UP79 889 aa13.34□□□□□ -0.27
GGA3-210ENST00000580799 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
GGA3-210ENST00000580799 COL4A1P02462 1669 aa13.34□□□□□ -0.27
GGA3-210ENST00000580799 SHTN1A0MZ66 631 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 RIMBP2O15034 1052 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 ECE2O60344 883 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 CALD1Q05682 793 aaKnown RBP13.33□□□□□ -0.28
GGA3-210ENST00000580799 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
GGA3-210ENST00000580799 RTL5Q5HYW3 569 aaPredicted RBP13.33□□□□□ -0.28
GGA3-210ENST00000580799 SAMD7Q7Z3H4 446 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 KRT26Q7Z3Y9 468 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 USP48Q86UV5 1035 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
GGA3-210ENST00000580799 ZNF428Q96B54 188 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 MBIPQ9NS73 344 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 PODXL2Q9NZ53 605 aa13.33□□□□□ -0.28
GGA3-210ENST00000580799 ZNF609O15014 1411 aa13.32□□□□□ -0.28
GGA3-210ENST00000580799 ZNF853P0CG23 659 aa13.32□□□□□ -0.28
GGA3-210ENST00000580799 HUNKP57058 714 aa13.32□□□□□ -0.28
GGA3-210ENST00000580799 TBC1D10BQ4KMP7 808 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms