RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.22
SMG8-205ENST00000580798 SCG3Q8WXD2 468 aaKnown RBP7.46□□□□□ -1.22
SMG8-205ENST00000580798 ZNF594Q96JF6 807 aaPredicted RBP7.46□□□□□ -1.22
SMG8-205ENST00000580798 AKTIPQ9H8T0 292 aa7.46□□□□□ -1.22
SMG8-205ENST00000580798 MKRN1Q9UHC7 482 aaKnown RBP7.46□□□□□ -1.22
SMG8-205ENST00000580798 MED26O95402 600 aa7.45□□□□□ -1.22
SMG8-205ENST00000580798 IRAK1P51617 712 aa7.45□□□□□ -1.22
SMG8-205ENST00000580798 GPLD1P80108 840 aa7.45□□□□□ -1.22
SMG8-205ENST00000580798 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
SMG8-205ENST00000580798 UCN2Q96RP3 112 aa7.45□□□□□ -1.22
SMG8-205ENST00000580798 COBLO75128 1261 aa7.44□□□□□ -1.22
SMG8-205ENST00000580798 EPB42P16452 691 aa7.44□□□□□ -1.22
SMG8-205ENST00000580798 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
SMG8-205ENST00000580798 INPP5BP32019 993 aa7.44□□□□□ -1.22
SMG8-205ENST00000580798 TMEM130Q8N3G9 435 aa7.44□□□□□ -1.22
SMG8-205ENST00000580798 IFT43Q96FT9 208 aa7.44□□□□□ -1.22
SMG8-205ENST00000580798 SMG9Q9H0W8 520 aaKnown RBP7.44□□□□□ -1.22
SMG8-205ENST00000580798 F8W735 103 aaPredicted RBP7.43□□□□□ -1.22
SMG8-205ENST00000580798 YBX3P16989 372 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMG8-205ENST00000580798 HFE2Q6ZVN8 426 aa7.43□□□□□ -1.22
SMG8-205ENST00000580798 POM121Q96HA1 1249 aa7.43□□□□□ -1.22
SMG8-205ENST00000580798 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
SMG8-205ENST00000580798 OAS3Q9Y6K5 1087 aaKnown RBP7.43□□□□□ -1.22
SMG8-205ENST00000580798 POM121CA8CG34 1229 aa7.42□□□□□ -1.22
SMG8-205ENST00000580798 ATP9BO43861 1147 aa7.42□□□□□ -1.22
SMG8-205ENST00000580798 RARAP10276 462 aa7.42□□□□□ -1.22
SMG8-205ENST00000580798 TAL1P17542 331 aaPredicted RBP7.42□□□□□ -1.22
SMG8-205ENST00000580798 IDH3AP50213 366 aa7.42□□□□□ -1.22
SMG8-205ENST00000580798 WWC1Q8IX03 1113 aa7.42□□□□□ -1.22
SMG8-205ENST00000580798 RBM19Q9Y4C8 960 aaKnown RBP7.42□□□□□ -1.22
SMG8-205ENST00000580798 SASH3O75995 380 aa7.41□□□□□ -1.22
SMG8-205ENST00000580798 KLK14Q9P0G3 267 aa7.41□□□□□ -1.22
SMG8-205ENST00000580798 ARID1BQ8NFD5 2236 aaPredicted RBP7.41□□□□□ -1.22
SMG8-205ENST00000580798 KIAA1324LA8MWY0 1029 aaPredicted RBP7.4□□□□□ -1.22
SMG8-205ENST00000580798 TGFB1P01137 390 aa7.4□□□□□ -1.22
SMG8-205ENST00000580798 EIF2AK2P19525 551 aaKnown RBP7.4□□□□□ -1.22
SMG8-205ENST00000580798 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
SMG8-205ENST00000580798 Q6ZS46 218 aa7.4□□□□□ -1.22
SMG8-205ENST00000580798 PTCD1O75127 700 aaKnown RBP7.39□□□□□ -1.23
SMG8-205ENST00000580798 RASA1P20936 1047 aa7.39□□□□□ -1.23
SMG8-205ENST00000580798 NRLP54845 237 aa7.39□□□□□ -1.23
SMG8-205ENST00000580798 SEC13P55735 322 aa7.39□□□□□ -1.23
SMG8-205ENST00000580798 AGGF1Q8N302 714 aaeCLIP7.39□□□□□ -1.23
SMG8-205ENST00000580798 C11orf16Q9NQ32 467 aa7.39□□□□□ -1.23
SMG8-205ENST00000580798 RAXQ9Y2V3 346 aa7.39□□□□□ -1.23
SMG8-205ENST00000580798 LGR5O75473 907 aa7.38□□□□□ -1.23
SMG8-205ENST00000580798 IGLV1-40P01703 118 aa7.38□□□□□ -1.23
SMG8-205ENST00000580798 ARSDP51689 593 aa7.38□□□□□ -1.23
SMG8-205ENST00000580798 LCE1DQ5T752 114 aa7.38□□□□□ -1.23
SMG8-205ENST00000580798 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
SMG8-205ENST00000580798 PLD4Q96BZ4 506 aa7.38□□□□□ -1.23
SMG8-205ENST00000580798 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
SMG8-205ENST00000580798 J3QW42 95 aa7.37□□□□□ -1.23
SMG8-205ENST00000580798 GSC2O15499 205 aa7.37□□□□□ -1.23
SMG8-205ENST00000580798 GLB1P16278 677 aa7.37□□□□□ -1.23
SMG8-205ENST00000580798 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
SMG8-205ENST00000580798 GDF6Q6KF10 455 aaPredicted RBP7.37□□□□□ -1.23
SMG8-205ENST00000580798 TLR7Q9NYK1 1049 aaKnown RBP7.37□□□□□ -1.23
SMG8-205ENST00000580798 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
SMG8-205ENST00000580798 ADAMTS4O75173 837 aa7.36□□□□□ -1.23
SMG8-205ENST00000580798 MICAL2O94851 1124 aa7.36□□□□□ -1.23
SMG8-205ENST00000580798 ARID4AP29374 1257 aaPredicted RBP7.36□□□□□ -1.23
SMG8-205ENST00000580798 DGKZQ13574 1117 aa7.36□□□□□ -1.23
SMG8-205ENST00000580798 IL22RA1Q8N6P7 574 aa7.36□□□□□ -1.23
SMG8-205ENST00000580798 UBL7Q96S82 380 aaPredicted RBP7.36□□□□□ -1.23
SMG8-205ENST00000580798 HINFPQ9BQA5 517 aa7.36□□□□□ -1.23
SMG8-205ENST00000580798 SRA1Q9HD15 236 aaKnown RBP7.36□□□□□ -1.23
SMG8-205ENST00000580798 STOML1Q9UBI4 398 aa7.36□□□□□ -1.23
SMG8-205ENST00000580798 IGFBP4P22692 258 aa7.35□□□□□ -1.23
SMG8-205ENST00000580798 ZDHHC13Q8IUH4 622 aa7.35□□□□□ -1.23
SMG8-205ENST00000580798 USP20Q9Y2K6 914 aa7.35□□□□□ -1.23
SMG8-205ENST00000580798 LOC102724428A0A0B4J2F2 783 aa7.34□□□□□ -1.23
SMG8-205ENST00000580798 SIK1P57059 783 aa7.34□□□□□ -1.23
SMG8-205ENST00000580798 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.34□□□□□ -1.23
SMG8-205ENST00000580798 MAP4K3Q8IVH8 894 aa7.34□□□□□ -1.23
SMG8-205ENST00000580798 ARMC10Q8N2F6 343 aa7.34□□□□□ -1.23
SMG8-205ENST00000580798 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
SMG8-205ENST00000580798 OPLAHO14841 1288 aa7.33□□□□□ -1.24
SMG8-205ENST00000580798 EGFRP00533 1210 aa7.33□□□□□ -1.24
SMG8-205ENST00000580798 SPINK2P20155 84 aa7.33□□□□□ -1.24
SMG8-205ENST00000580798 NSUN5Q96P11 429 aaKnown RBP7.33□□□□□ -1.24
SMG8-205ENST00000580798 RTCBQ9Y3I0 505 aaKnown RBP7.33□□□□□ -1.24
SMG8-205ENST00000580798 RAD21O60216 631 aa7.32□□□□□ -1.24
SMG8-205ENST00000580798 GHRHP01286 108 aa7.32□□□□□ -1.24
SMG8-205ENST00000580798 FZD5Q13467 585 aa7.32□□□□□ -1.24
SMG8-205ENST00000580798 DCAF11Q8TEB1 546 aa7.32□□□□□ -1.24
SMG8-205ENST00000580798 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
SMG8-205ENST00000580798 DHX15O43143 795 aaKnown RBP7.31□□□□□ -1.24
SMG8-205ENST00000580798 MMP20O60882 483 aa7.31□□□□□ -1.24
SMG8-205ENST00000580798 XYLBO75191 536 aa7.31□□□□□ -1.24
SMG8-205ENST00000580798 PSAPP07602 524 aa7.31□□□□□ -1.24
SMG8-205ENST00000580798 UBTFP17480 764 aaKnown RBP7.31□□□□□ -1.24
SMG8-205ENST00000580798 NFIAQ12857 509 aa7.31□□□□□ -1.24
SMG8-205ENST00000580798 C11orf91Q3C1V1 193 aa7.31□□□□□ -1.24
SMG8-205ENST00000580798 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
SMG8-205ENST00000580798 WISP1O95388 367 aa7.3□□□□□ -1.24
SMG8-205ENST00000580798 DPYDQ12882 1025 aa7.3□□□□□ -1.24
SMG8-205ENST00000580798 CRTC2Q53ET0 693 aaPredicted RBP7.3□□□□□ -1.24
SMG8-205ENST00000580798 INTS5Q6P9B9 1019 aaKnown RBP7.3□□□□□ -1.24
SMG8-205ENST00000580798 PRR19A6NJB7 356 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms