RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 SEC13P55735 322 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 SERPINA10Q9UK55 444 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 LRP6O75581 1613 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 CCDC141Q6ZP82 1450 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 COL16A1Q07092 1604 aaPredicted RBP10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 M0R2N6 131 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 MSX1P28360 303 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 PTK7Q13308 1070 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 DBN1Q16643 649 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 NBPF1Q3BBV0 1214 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 CRTC2Q53ET0 693 aaPredicted RBP10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 CDCA8Q53HL2 280 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 SLC9A9Q8IVB4 645 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 GPR161Q8N6U8 529 aaKnown RBP10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 ZNF837Q96EG3 531 aaPredicted RBP10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 IQSEC3Q9UPP2 1182 aaPredicted RBP10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 USP3Q9Y6I4 520 aa10.27□□□□□ -0.77
PPP4R1-216ENST00000580283 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
PPP4R1-216ENST00000580283 PIK3C2BO00750 1634 aa10.26□□□□□ -0.77
PPP4R1-216ENST00000580283 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
PPP4R1-216ENST00000580283 DPYDQ12882 1025 aa10.26□□□□□ -0.77
PPP4R1-216ENST00000580283 COL25A1Q9BXS0 654 aaPredicted RBP10.26□□□□□ -0.77
PPP4R1-216ENST00000580283 CHMP3Q9Y3E7 222 aa10.26□□□□□ -0.77
PPP4R1-216ENST00000580283 KCNA6P17658 529 aa10.25□□□□□ -0.77
PPP4R1-216ENST00000580283 EPHA4P54764 986 aa10.25□□□□□ -0.77
PPP4R1-216ENST00000580283 ANKMY2Q8IV38 441 aa10.25□□□□□ -0.77
PPP4R1-216ENST00000580283 TSEN2Q8NCE0 465 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-216ENST00000580283 C1orf216Q8TAB5 229 aa10.25□□□□□ -0.77
PPP4R1-216ENST00000580283 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
PPP4R1-216ENST00000580283 RUBCNLQ9H714 662 aa10.25□□□□□ -0.77
PPP4R1-216ENST00000580283 CEP162Q5TB80 1403 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 CHD2O14647 1828 aaKnown RBP10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 ARHGEF5Q12774 1597 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 FOXK2Q01167 660 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 EFHC2Q5JST6 749 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 TBCELQ5QJ74 424 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 GTPBP3Q969Y2 492 aaKnown RBP10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 SLC26A8Q96RN1 970 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 SLAIN2Q9P270 581 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 ZNF232Q9UNY5 417 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 JCADQ9P266 1359 aa10.24□□□□□ -0.77
PPP4R1-216ENST00000580283 PRDM15P57071 1507 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-216ENST00000580283 DKK1O94907 266 aa10.23□□□□□ -0.77
PPP4R1-216ENST00000580283 CNTNAP3BQ96NU0 1288 aa10.23□□□□□ -0.77
PPP4R1-216ENST00000580283 CNTNAP3Q9BZ76 1288 aa10.23□□□□□ -0.77
PPP4R1-216ENST00000580283 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
PPP4R1-216ENST00000580283 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 GPR25O00155 361 aa10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 TEAD4Q15561 434 aa10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 ARSJQ5FYB0 599 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 ZNF295-AS1Q8N0V1 137 aa10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 L3MBTL2Q969R5 705 aa10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 TSPAN10Q9H1Z9 355 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 ZDHHC3Q9NYG2 299 aa10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 TMEM2Q9UHN6 1383 aa10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 NWD1Q149M9 1564 aa10.22□□□□□ -0.77
PPP4R1-216ENST00000580283 SERTM1A2A2V5 107 aa10.21□□□□□ -0.77
PPP4R1-216ENST00000580283 NOS2P35228 1153 aa10.21□□□□□ -0.77
PPP4R1-216ENST00000580283 PSMA6P60900 246 aaKnown RBP10.21□□□□□ -0.77
PPP4R1-216ENST00000580283 FAM200AQ8TCP9 573 aa10.21□□□□□ -0.77
PPP4R1-216ENST00000580283 LRRC9Q6ZRR7 1453 aa10.21□□□□□ -0.78
PPP4R1-216ENST00000580283 MAST1Q9Y2H9 1570 aa10.21□□□□□ -0.78
PPP4R1-216ENST00000580283 KDM5AP29375 1690 aaKnown RBP10.21□□□□□ -0.78
PPP4R1-216ENST00000580283 SHPRHQ149N8 1683 aa10.21□□□□□ -0.78
PPP4R1-216ENST00000580283 MYO5BQ9ULV0 1848 aa10.21□□□□□ -0.78
PPP4R1-216ENST00000580283 EP400Q96L91 3159 aa10.2□□□□□ -0.78
PPP4R1-216ENST00000580283 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.2□□□□□ -0.78
PPP4R1-216ENST00000580283 PPP1R12BO60237 982 aaPredicted RBP10.2□□□□□ -0.78
PPP4R1-216ENST00000580283 ARHGAP31Q2M1Z3 1444 aa10.2□□□□□ -0.78
PPP4R1-216ENST00000580283 CRISPLD1Q9H336 500 aa10.2□□□□□ -0.78
PPP4R1-216ENST00000580283 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
PPP4R1-216ENST00000580283 GJA3Q9Y6H8 435 aa10.2□□□□□ -0.78
PPP4R1-216ENST00000580283 TSPY4P0CV99 314 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 TSPY10P0CW01 314 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 ATP4AP20648 1035 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 KRT76Q01546 638 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 IDI1Q13907 227 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 ZNF772Q68DY9 489 aaPredicted RBP10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 BICDL1Q6ZP65 573 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 CCDC82Q8N4S0 544 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 ZDHHC1Q8WTX9 485 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 NOVA2Q9UNW9 492 aaKnown RBP10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 PHF24Q9UPV7 400 aa10.19□□□□□ -0.78
PPP4R1-216ENST00000580283 DIP2AQ14689 1571 aa10.18□□□□□ -0.78
PPP4R1-216ENST00000580283 RXRBP28702 533 aa10.18□□□□□ -0.78
PPP4R1-216ENST00000580283 RNFT1Q5M7Z0 435 aa10.18□□□□□ -0.78
PPP4R1-216ENST00000580283 ZSCAN1Q8NBB4 408 aa10.18□□□□□ -0.78
PPP4R1-216ENST00000580283 SCG3Q8WXD2 468 aaKnown RBP10.18□□□□□ -0.78
PPP4R1-216ENST00000580283 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.18□□□□□ -0.78
PPP4R1-216ENST00000580283 NKTRP30414 1462 aaKnown RBP10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 CDK12Q9NYV4 1490 aaPredicted RBP10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
PPP4R1-216ENST00000580283 SPATA31A6Q5VVP1 1343 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms