RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 GMPSP49915 693 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-216ENST00000579853 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-216ENST00000579853 CIAPIN1Q6FI81 312 aa16.15■□□□□ 0.18
CDK5RAP3-216ENST00000579853 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-216ENST00000579853 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
CDK5RAP3-216ENST00000579853 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
CDK5RAP3-216ENST00000579853 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
CDK5RAP3-216ENST00000579853 SLC10A5Q5PT55 438 aa16.14■□□□□ 0.17
CDK5RAP3-216ENST00000579853 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-216ENST00000579853 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
CDK5RAP3-216ENST00000579853 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
CDK5RAP3-216ENST00000579853 DGKZQ13574 1117 aa16.13■□□□□ 0.17
CDK5RAP3-216ENST00000579853 SP8Q8IXZ3 490 aa16.13■□□□□ 0.17
CDK5RAP3-216ENST00000579853 MPNDQ8N594 471 aa16.13■□□□□ 0.17
CDK5RAP3-216ENST00000579853 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-216ENST00000579853 H7C1D1 291 aa16.12■□□□□ 0.17
CDK5RAP3-216ENST00000579853 ABCC4O15439 1325 aa16.12■□□□□ 0.17
CDK5RAP3-216ENST00000579853 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
CDK5RAP3-216ENST00000579853 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
CDK5RAP3-216ENST00000579853 ZNF408Q9H9D4 720 aa16.11■□□□□ 0.17
CDK5RAP3-216ENST00000579853 HUNKP57058 714 aa16.1■□□□□ 0.17
CDK5RAP3-216ENST00000579853 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
CDK5RAP3-216ENST00000579853 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-216ENST00000579853 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-216ENST00000579853 CNOT7Q9UIV1 285 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-216ENST00000579853 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
CDK5RAP3-216ENST00000579853 RAD17O75943 681 aa16.09■□□□□ 0.17
CDK5RAP3-216ENST00000579853 HIRAP54198 1017 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-216ENST00000579853 DPF2Q92785 391 aa16.09■□□□□ 0.17
CDK5RAP3-216ENST00000579853 SAGE1Q9NXZ1 904 aa16.09■□□□□ 0.17
CDK5RAP3-216ENST00000579853 NFE2L2Q16236 605 aa16.08■□□□□ 0.16
CDK5RAP3-216ENST00000579853 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
CDK5RAP3-216ENST00000579853 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
CDK5RAP3-216ENST00000579853 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
CDK5RAP3-216ENST00000579853 GRAPQ13588 217 aa16.07■□□□□ 0.16
CDK5RAP3-216ENST00000579853 C2orf69Q8N8R5 385 aa16.07■□□□□ 0.16
CDK5RAP3-216ENST00000579853 GRAPLQ8TC17 118 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-216ENST00000579853 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
CDK5RAP3-216ENST00000579853 RGMBQ6NW40 437 aa16.06■□□□□ 0.16
CDK5RAP3-216ENST00000579853 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
CDK5RAP3-216ENST00000579853 MICALL2Q8IY33 904 aa16.06■□□□□ 0.16
CDK5RAP3-216ENST00000579853 MAPK8IP3Q9UPT6 1336 aa16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 RPS12P25398 132 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 PDIA6Q15084 440 aa16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 KRT26Q7Z3Y9 468 aa16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 LRP10Q7Z4F1 713 aa16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
CDK5RAP3-216ENST00000579853 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
CDK5RAP3-216ENST00000579853 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-216ENST00000579853 EIF2S2P20042 333 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-216ENST00000579853 WASHC4Q2M389 1173 aa16.04■□□□□ 0.16
CDK5RAP3-216ENST00000579853 NLRP10Q86W26 655 aa16.04■□□□□ 0.16
CDK5RAP3-216ENST00000579853 DCPSQ96C86 337 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-216ENST00000579853 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
CDK5RAP3-216ENST00000579853 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
CDK5RAP3-216ENST00000579853 TCIRG1Q13488 830 aa16.03■□□□□ 0.16
CDK5RAP3-216ENST00000579853 REM2Q8IYK8 340 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-216ENST00000579853 ZIC5Q96T25 663 aa16.03■□□□□ 0.16
CDK5RAP3-216ENST00000579853 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-216ENST00000579853 LAMB2P55268 1798 aa16.03■□□□□ 0.16
CDK5RAP3-216ENST00000579853 POLR2AP24928 1970 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-216ENST00000579853 AKAP11Q9UKA4 1901 aa16.02■□□□□ 0.16
CDK5RAP3-216ENST00000579853 PSMD14O00487 310 aa16.02■□□□□ 0.16
CDK5RAP3-216ENST00000579853 ZNF157P51786 506 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-216ENST00000579853 FAM155AB1AL88 458 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 KIF23Q02241 960 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 TBC1D10BQ4KMP7 808 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 COPS6Q7L5N1 327 aa16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 SAMD7Q7Z3H4 446 aa16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 EYA3Q99504 573 aa16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 NSFL1CQ9UNZ2 370 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-216ENST00000579853 LRRC37AA6NMS7 1700 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 SHTN1A0MZ66 631 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 TRPA1O75762 1119 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 PROSER3Q2NL68 480 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 SULF1Q8IWU6 871 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 XAGE3Q8WTP9 111 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 RNF186Q9NXI6 227 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 DUOX1Q9NRD9 1551 aa16■□□□□ 0.15
CDK5RAP3-216ENST00000579853 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
CDK5RAP3-216ENST00000579853 CTU1Q7Z7A3 348 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-216ENST00000579853 DBNDD1Q9H9R9 158 aa15.99■□□□□ 0.15
CDK5RAP3-216ENST00000579853 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
CDK5RAP3-216ENST00000579853 ANXA1P04083 346 aa15.98■□□□□ 0.15
CDK5RAP3-216ENST00000579853 SLC10A3P09131 477 aa15.98■□□□□ 0.15
CDK5RAP3-216ENST00000579853 SF3B3Q15393 1217 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-216ENST00000579853 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 ECE2O60344 883 aa15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 RIPK4P57078 832 aa15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 FKBP1BP68106 108 aa15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 PRPF38BQ5VTL8 546 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 CSRNP1Q96S65 589 aa15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 TAF1P21675 1872 aa15.97■□□□□ 0.15
CDK5RAP3-216ENST00000579853 ADM5C9JUS6 153 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms