RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, human

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIMD2-208	ENST00000579814	DNAAF4	Q8WXU2	420 aa		33.47	■■■□□ 2.95
LIMD2-208	ENST00000579814	NEURL1B	A8MQ27	555 aa		33.46	■■■□□ 2.95
LIMD2-208	ENST00000579814	DDN	O94850	711 aa	Predicted RBP	33.46	■■■□□ 2.95
LIMD2-208	ENST00000579814	CWF19L2	Q2TBE0	894 aa	Known RBP	33.46	■■■□□ 2.95
LIMD2-208	ENST00000579814	SLC51A	Q86UW1	340 aa		33.46	■■■□□ 2.95
LIMD2-208	ENST00000579814	MPND	Q8N594	471 aa		33.46	■■■□□ 2.95
LIMD2-208	ENST00000579814	SUPT20H	Q8NEM7	779 aa		33.46	■■■□□ 2.95
LIMD2-208	ENST00000579814	DPP8	Q6V1X1	898 aa	Predicted RBP	33.45	■■■□□ 2.95
LIMD2-208	ENST00000579814	LARGE2	Q8N3Y3	721 aa		33.45	■■■□□ 2.95
LIMD2-208	ENST00000579814	CCDC152	Q4G0S7	254 aa		33.44	■■■□□ 2.94
LIMD2-208	ENST00000579814	CELF1	Q92879	486 aa	Known RBP	33.44	■■■□□ 2.94
LIMD2-208	ENST00000579814	VPS33B	Q9H267	617 aa		33.44	■■■□□ 2.94
LIMD2-208	ENST00000579814	CDHR2	Q9BYE9	1310 aa		33.44	■■■□□ 2.94
LIMD2-208	ENST00000579814	FZD9	O00144	591 aa		33.43	■■■□□ 2.94
LIMD2-208	ENST00000579814	SLFN5	Q08AF3	891 aa		33.43	■■■□□ 2.94
LIMD2-208	ENST00000579814	RPS8	P62241	208 aa	Known RBP	33.42	■■■□□ 2.94
LIMD2-208	ENST00000579814	LINS1	Q8NG48	757 aa		33.42	■■■□□ 2.94
LIMD2-208	ENST00000579814	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.42	■■■□□ 2.94
LIMD2-208	ENST00000579814	POTEC	B2RU33	542 aa		33.41	■■■□□ 2.94
LIMD2-208	ENST00000579814	PPIP5K2	O43314	1243 aa		33.41	■■■□□ 2.94
LIMD2-208	ENST00000579814	HSPA6	P17066	643 aa		33.4	■■■□□ 2.94
LIMD2-208	ENST00000579814	EIF6	P56537	245 aa	Known RBP	33.4	■■■□□ 2.94
LIMD2-208	ENST00000579814	GCKR	Q14397	625 aa		33.4	■■■□□ 2.94
LIMD2-208	ENST00000579814	CCDC88A	Q3V6T2	1871 aa		33.39	■■■□□ 2.94
LIMD2-208	ENST00000579814		H7C1W4	665 aa		33.39	■■■□□ 2.94
LIMD2-208	ENST00000579814	FSTL1	Q12841	308 aa		33.39	■■■□□ 2.94
LIMD2-208	ENST00000579814	NIM1K	Q8IY84	436 aa		33.39	■■■□□ 2.94
LIMD2-208	ENST00000579814	ZNF541	Q9H0D2	1346 aa		33.38	■■■□□ 2.93
LIMD2-208	ENST00000579814	MIER1	Q8N108	512 aa		33.38	■■■□□ 2.93
LIMD2-208	ENST00000579814	SEC31B	Q9NQW1	1179 aa		33.38	■■■□□ 2.93
LIMD2-208	ENST00000579814	TIAM2	Q8IVF5	1701 aa		33.38	■■■□□ 2.93
LIMD2-208	ENST00000579814	IQCA1L	A6NCM1	817 aa		33.37	■■■□□ 2.93
LIMD2-208	ENST00000579814	AOC3	Q16853	763 aa		33.37	■■■□□ 2.93
LIMD2-208	ENST00000579814	UBE3B	Q7Z3V4	1068 aa		33.37	■■■□□ 2.93
LIMD2-208	ENST00000579814	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.37	■■■□□ 2.93
LIMD2-208	ENST00000579814	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.37	■■■□□ 2.93
LIMD2-208	ENST00000579814		F6X3S4	739 aa		33.36	■■■□□ 2.93
LIMD2-208	ENST00000579814	CTSW	P56202	376 aa		33.36	■■■□□ 2.93
LIMD2-208	ENST00000579814	SMC1B	Q8NDV3	1235 aa		33.36	■■■□□ 2.93
LIMD2-208	ENST00000579814	CDCA7L	Q96GN5	454 aa		33.36	■■■□□ 2.93
LIMD2-208	ENST00000579814	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.36	■■■□□ 2.93
LIMD2-208	ENST00000579814	GPC2	Q8N158	579 aa		33.35	■■■□□ 2.93
LIMD2-208	ENST00000579814	DICER1	Q9UPY3	1922 aa	Known RBP	33.35	■■■□□ 2.93
LIMD2-208	ENST00000579814	DDX60	Q8IY21	1712 aa	Known RBP	33.33	■■■□□ 2.93
LIMD2-208	ENST00000579814	TTLL11	Q8NHH1	800 aa		33.33	■■■□□ 2.93
LIMD2-208	ENST00000579814	LAMB2	P55268	1798 aa		33.32	■■■□□ 2.92
LIMD2-208	ENST00000579814	KIAA2012	Q0VF49	1180 aa		33.32	■■■□□ 2.92
LIMD2-208	ENST00000579814	BEND3	Q5T5X7	828 aa		33.32	■■■□□ 2.92
LIMD2-208	ENST00000579814	ANKRD18A	Q8IVF6	992 aa		33.32	■■■□□ 2.92
LIMD2-208	ENST00000579814	CDC5L	Q99459	802 aa	Known RBP	33.32	■■■□□ 2.92
LIMD2-208	ENST00000579814	ZNRF3	Q9ULT6	936 aa		33.31	■■■□□ 2.92
LIMD2-208	ENST00000579814	GJA3	Q9Y6H8	435 aa		33.31	■■■□□ 2.92
LIMD2-208	ENST00000579814	GPSM2	P81274	684 aa		33.3	■■■□□ 2.92
LIMD2-208	ENST00000579814	TRMT2A	Q8IZ69	625 aa	Known RBP	33.3	■■■□□ 2.92
LIMD2-208	ENST00000579814	PLA2G12B	Q9BX93	195 aa		33.3	■■■□□ 2.92
LIMD2-208	ENST00000579814	WDR90	Q96KV7	1748 aa		33.29	■■■□□ 2.92
LIMD2-208	ENST00000579814	C6orf229	H3BNL8	230 aa		33.29	■■■□□ 2.92
LIMD2-208	ENST00000579814	MRPL50	Q8N5N7	158 aa	Known RBP	33.29	■■■□□ 2.92
LIMD2-208	ENST00000579814	HACL1	Q9UJ83	578 aa		33.29	■■■□□ 2.92
LIMD2-208	ENST00000579814	APLP1	P51693	650 aa		33.28	■■■□□ 2.92
LIMD2-208	ENST00000579814	CASP7	P55210	303 aa		33.28	■■■□□ 2.92
LIMD2-208	ENST00000579814	WASHC4	Q2M389	1173 aa		33.28	■■■□□ 2.92
LIMD2-208	ENST00000579814	SLC4A10	Q6U841	1118 aa		33.28	■■■□□ 2.92
LIMD2-208	ENST00000579814	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.28	■■■□□ 2.92
LIMD2-208	ENST00000579814	EYA3	Q99504	573 aa		33.27	■■■□□ 2.92
LIMD2-208	ENST00000579814	GREM2	Q9H772	168 aa		33.27	■■■□□ 2.92
LIMD2-208	ENST00000579814	ANKIB1	Q9P2G1	1089 aa		33.27	■■■□□ 2.92
LIMD2-208	ENST00000579814	SSH1	Q8WYL5	1049 aa		33.26	■■■□□ 2.91
LIMD2-208	ENST00000579814	POLL	Q9UGP5	575 aa		33.26	■■■□□ 2.91
LIMD2-208	ENST00000579814	ALDH1L1	O75891	902 aa		33.25	■■■□□ 2.91
LIMD2-208	ENST00000579814	PODXL2	Q9NZ53	605 aa		33.25	■■■□□ 2.91
LIMD2-208	ENST00000579814	COL4A5	P29400	1685 aa		33.25	■■■□□ 2.91
LIMD2-208	ENST00000579814	RTL9	Q8NET4	1388 aa		33.24	■■■□□ 2.91
LIMD2-208	ENST00000579814	CACNA1F	O60840	1977 aa		33.24	■■■□□ 2.91
LIMD2-208	ENST00000579814	CT47B1	P0C2W7	299 aa	Predicted RBP	33.24	■■■□□ 2.91
LIMD2-208	ENST00000579814	TBC1D16	Q8TBP0	767 aa		33.24	■■■□□ 2.91
LIMD2-208	ENST00000579814	SRCIN1	Q9C0H9	1055 aa		33.24	■■■□□ 2.91
LIMD2-208	ENST00000579814	LMOD1	P29536	600 aa	Predicted RBP	33.23	■■■□□ 2.91
LIMD2-208	ENST00000579814	EPHX2	P34913	555 aa		33.23	■■■□□ 2.91
LIMD2-208	ENST00000579814	CXCL9	Q07325	125 aa		33.23	■■■□□ 2.91
LIMD2-208	ENST00000579814	ALDH1L2	Q3SY69	923 aa		33.23	■■■□□ 2.91
LIMD2-208	ENST00000579814	BSDC1	Q9NW68	430 aa	Predicted RBP	33.23	■■■□□ 2.91
LIMD2-208	ENST00000579814	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.23	■■■□□ 2.91
LIMD2-208	ENST00000579814	PTPRC	P08575	1304 aa		33.23	■■■□□ 2.91
LIMD2-208	ENST00000579814	RIMBP2	O15034	1052 aa		33.22	■■■□□ 2.91
LIMD2-208	ENST00000579814	CSF1R	P07333	972 aa		33.22	■■■□□ 2.91
LIMD2-208	ENST00000579814	CHADL	Q6NUI6	762 aa		33.22	■■■□□ 2.91
LIMD2-208	ENST00000579814	GGA1	Q9UJY5	639 aa		33.22	■■■□□ 2.91
LIMD2-208	ENST00000579814	GRM8	O00222	908 aa		33.21	■■■□□ 2.91
LIMD2-208	ENST00000579814	CIAPIN1	Q6FI81	312 aa		33.21	■■■□□ 2.91
LIMD2-208	ENST00000579814	PNMA8A	Q86V59	439 aa	Predicted RBP	33.21	■■■□□ 2.91
LIMD2-208	ENST00000579814	ZC3H12C	Q9C0D7	883 aa	Known RBP	33.21	■■■□□ 2.91
LIMD2-208	ENST00000579814	UFL1	O94874	794 aa		33.2	■■■□□ 2.91
LIMD2-208	ENST00000579814	IGHMBP2	P38935	993 aa	Known RBP	33.2	■■■□□ 2.91
LIMD2-208	ENST00000579814	TNIP1	Q15025	636 aa		33.2	■■■□□ 2.91
LIMD2-208	ENST00000579814	EAPP	Q56P03	285 aa	Predicted RBP	33.2	■■■□□ 2.91
LIMD2-208	ENST00000579814	LDHD	Q86WU2	507 aa		33.2	■■■□□ 2.91
LIMD2-208	ENST00000579814	BCL2L13	Q9BXK5	485 aa		33.2	■■■□□ 2.91
LIMD2-208	ENST00000579814	TAF1	P21675	1872 aa		33.2	■■■□□ 2.9
LIMD2-208	ENST00000579814	ITGA6	P23229	1130 aa		33.19	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms