RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SGSM3Q96HU1 749 aa8.63□□□□□ -1.03
COPS3-216ENST00000579716 HSH2DQ96JZ2 352 aa8.63□□□□□ -1.03
COPS3-216ENST00000579716 RBM47A0AV96 593 aaKnown RBP8.62□□□□□ -1.03
COPS3-216ENST00000579716 SERTM1A2A2V5 107 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 DKK1O94907 266 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 DEKP35659 375 aaKnown RBP8.62□□□□□ -1.03
COPS3-216ENST00000579716 ADH7P40394 386 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 FAM193AP78312 1265 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 CLDN10P78369 228 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 ARTNQ5T4W7 220 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 MICAL1Q8TDZ2 1067 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 HCN4Q9Y3Q4 1203 aa8.62□□□□□ -1.03
COPS3-216ENST00000579716 LZTS3O60299 673 aaPredicted RBP8.61□□□□□ -1.03
COPS3-216ENST00000579716 TCF3P15923 654 aa8.61□□□□□ -1.03
COPS3-216ENST00000579716 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
COPS3-216ENST00000579716 POM121Q96HA1 1249 aa8.61□□□□□ -1.03
COPS3-216ENST00000579716 TSPAN10Q9H1Z9 355 aaPredicted RBP8.61□□□□□ -1.03
COPS3-216ENST00000579716 ZNF232Q9UNY5 417 aa8.61□□□□□ -1.03
COPS3-216ENST00000579716 GPC6Q9Y625 555 aaPredicted RBP8.61□□□□□ -1.03
COPS3-216ENST00000579716 C21orf2O43822 256 aa8.6□□□□□ -1.03
COPS3-216ENST00000579716 HIRAP54198 1017 aaPredicted RBP8.6□□□□□ -1.03
COPS3-216ENST00000579716 TRIM28Q13263 835 aaKnown RBP8.6□□□□□ -1.03
COPS3-216ENST00000579716 ADGRE1Q14246 886 aa8.6□□□□□ -1.03
COPS3-216ENST00000579716 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
COPS3-216ENST00000579716 SPDYE3A6NKU9 549 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 SFI1A8K8P3 1242 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 USP17L5A8MUK1 530 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 TYRO3Q06418 890 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 CCDC181Q5TID7 509 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 C1orf53Q5VUE5 145 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 UBXN4Q92575 508 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 C8orf37Q96NL8 207 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 BRD7Q9NPI1 651 aa8.59□□□□□ -1.03
COPS3-216ENST00000579716 MAGEC2Q9UBF1 373 aaPredicted RBP8.59□□□□□ -1.03
COPS3-216ENST00000579716 APBA3O96018 575 aa8.58□□□□□ -1.04
COPS3-216ENST00000579716 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
COPS3-216ENST00000579716 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
COPS3-216ENST00000579716 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
COPS3-216ENST00000579716 NME8Q8N427 588 aa8.58□□□□□ -1.04
COPS3-216ENST00000579716 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
COPS3-216ENST00000579716 SUSD3Q96L08 255 aa8.58□□□□□ -1.04
COPS3-216ENST00000579716 PHACTR1Q9C0D0 580 aa8.58□□□□□ -1.04
COPS3-216ENST00000579716 A0A0A0MRY4 1105 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 POM121CA8CG34 1229 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 CLGNO14967 610 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 CALRP27797 417 aaKnown RBP8.57□□□□□ -1.04
COPS3-216ENST00000579716 PSME1Q06323 249 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 TPCN2Q8NHX9 752 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 CEP63Q96MT8 703 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 SSBP4Q9BWG4 385 aaPredicted RBP8.57□□□□□ -1.04
COPS3-216ENST00000579716 SLC52A1Q9NWF4 448 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 KCNH4Q9UQ05 1017 aa8.57□□□□□ -1.04
COPS3-216ENST00000579716 GRNP28799 593 aaKnown RBP8.56□□□□□ -1.04
COPS3-216ENST00000579716 CCDC102BQ68D86 513 aa8.56□□□□□ -1.04
COPS3-216ENST00000579716 ZNF622Q969S3 477 aaKnown RBP eCLIP8.56□□□□□ -1.04
COPS3-216ENST00000579716 ZFP64Q9NPA5 681 aa8.56□□□□□ -1.04
COPS3-216ENST00000579716 LONRF3Q496Y0 759 aa8.55□□□□□ -1.04
COPS3-216ENST00000579716 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
COPS3-216ENST00000579716 CCER1Q8TC90 406 aaPredicted RBP8.55□□□□□ -1.04
COPS3-216ENST00000579716 MRRFQ96E11 262 aaKnown RBP8.55□□□□□ -1.04
COPS3-216ENST00000579716 METTL14Q9HCE5 456 aaKnown RBP8.55□□□□□ -1.04
COPS3-216ENST00000579716 NEUROD4Q9HD90 331 aa8.55□□□□□ -1.04
COPS3-216ENST00000579716 KCNG1Q9UIX4 513 aa8.55□□□□□ -1.04
COPS3-216ENST00000579716 NAGPAQ9UK23 515 aa8.55□□□□□ -1.04
COPS3-216ENST00000579716 SCO2A0A1W2PP80 73 aa8.54□□□□□ -1.04
COPS3-216ENST00000579716 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
COPS3-216ENST00000579716 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
COPS3-216ENST00000579716 PSMA6P60900 246 aaKnown RBP8.54□□□□□ -1.04
COPS3-216ENST00000579716 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
COPS3-216ENST00000579716 TSHZ1Q6ZSZ6 1077 aa8.54□□□□□ -1.04
COPS3-216ENST00000579716 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
COPS3-216ENST00000579716 SMC5Q8IY18 1101 aa8.54□□□□□ -1.04
COPS3-216ENST00000579716 FNBP4Q8N3X1 1017 aaPredicted RBP8.54□□□□□ -1.04
COPS3-216ENST00000579716 LENG1Q96BZ8 264 aaPredicted RBP8.54□□□□□ -1.04
COPS3-216ENST00000579716 RAB11FIP3O75154 756 aa8.53□□□□□ -1.04
COPS3-216ENST00000579716 ARID4AP29374 1257 aaPredicted RBP8.53□□□□□ -1.04
COPS3-216ENST00000579716 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
COPS3-216ENST00000579716 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
COPS3-216ENST00000579716 BHMTQ93088 406 aa8.53□□□□□ -1.04
COPS3-216ENST00000579716 NACC1Q96RE7 527 aa8.53□□□□□ -1.04
COPS3-216ENST00000579716 GSX2Q9BZM3 304 aa8.53□□□□□ -1.04
COPS3-216ENST00000579716 PPP1R1BQ9UD71 204 aaPredicted RBP8.53□□□□□ -1.04
COPS3-216ENST00000579716 SLC6A14Q9UN76 642 aa8.53□□□□□ -1.04
COPS3-216ENST00000579716 C9orf172C9J069 976 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 LILRB5O75023 590 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 ELNP15502 786 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 MYBPC2Q14324 1141 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 KRBA2Q6ZNG9 492 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 RINLQ6ZS11 566 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 MTA3Q9BTC8 594 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 KIAA1522Q9P206 1035 aaPredicted RBP8.52□□□□□ -1.05
COPS3-216ENST00000579716 DMGDHQ9UI17 866 aaKnown RBP8.52□□□□□ -1.05
COPS3-216ENST00000579716 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
COPS3-216ENST00000579716 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 M0R2N6 131 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 ANP32CO43423 234 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 HYAL3O43820 417 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms