RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 CIAPIN1Q6FI81 312 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 LRP10Q7Z4F1 713 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 MPNDQ8N594 471 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
MSI2-208ENST00000579466 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
MSI2-208ENST00000579466 TLL2Q9Y6L7 1015 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 DUOX1Q9NRD9 1551 aa12.63□□□□□ -0.39
MSI2-208ENST00000579466 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
MSI2-208ENST00000579466 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
MSI2-208ENST00000579466 NLRP10Q86W26 655 aa12.62□□□□□ -0.39
MSI2-208ENST00000579466 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
MSI2-208ENST00000579466 TRPM4Q8TD43 1214 aa12.62□□□□□ -0.39
MSI2-208ENST00000579466 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
MSI2-208ENST00000579466 LAS1LQ9Y4W2 734 aaKnown RBP12.62□□□□□ -0.39
MSI2-208ENST00000579466 LRRC37AA6NMS7 1700 aa12.62□□□□□ -0.39
MSI2-208ENST00000579466 HSP90AB3PQ58FF7 597 aa12.61□□□□□ -0.39
MSI2-208ENST00000579466 SLC10A5Q5PT55 438 aa12.61□□□□□ -0.39
MSI2-208ENST00000579466 SH3TC1Q8TE82 1336 aa12.61□□□□□ -0.39
MSI2-208ENST00000579466 COL4A1P02462 1669 aa12.61□□□□□ -0.39
MSI2-208ENST00000579466 YDJCA8MPS7 323 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 KIAA2012Q0VF49 1180 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 GRAPQ13588 217 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
MSI2-208ENST00000579466 DLK2Q6UY11 383 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 SAPCD2Q86UD0 394 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 SP8Q8IXZ3 490 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 GRAPLQ8TC17 118 aaPredicted RBP12.6□□□□□ -0.39
MSI2-208ENST00000579466 RTFDC1Q9BY42 306 aaPredicted RBP12.6□□□□□ -0.39
MSI2-208ENST00000579466 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
MSI2-208ENST00000579466 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
MSI2-208ENST00000579466 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
MSI2-208ENST00000579466 BBOX1O75936 387 aa12.59□□□□□ -0.39
MSI2-208ENST00000579466 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
MSI2-208ENST00000579466 HIRAP54198 1017 aaPredicted RBP12.59□□□□□ -0.39
MSI2-208ENST00000579466 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
MSI2-208ENST00000579466 MICALL2Q8IY33 904 aa12.59□□□□□ -0.39
MSI2-208ENST00000579466 DBNDD1Q9H9R9 158 aa12.59□□□□□ -0.39
MSI2-208ENST00000579466 CNOT7Q9UIV1 285 aaKnown RBP12.59□□□□□ -0.39
MSI2-208ENST00000579466 ATP5J2-PTCD1G3V325 749 aa12.58□□□□□ -0.4
MSI2-208ENST00000579466 LMOD3Q0VAK6 560 aa12.58□□□□□ -0.4
MSI2-208ENST00000579466 TNIP1Q15025 636 aa12.58□□□□□ -0.4
MSI2-208ENST00000579466 TBC1D10BQ4KMP7 808 aaPredicted RBP12.58□□□□□ -0.4
MSI2-208ENST00000579466 SAMD7Q7Z3H4 446 aa12.58□□□□□ -0.4
MSI2-208ENST00000579466 USP48Q86UV5 1035 aa12.58□□□□□ -0.4
MSI2-208ENST00000579466 VPS33BQ9H267 617 aa12.58□□□□□ -0.4
MSI2-208ENST00000579466 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
MSI2-208ENST00000579466 C6orf229H3BNL8 230 aa12.57□□□□□ -0.4
MSI2-208ENST00000579466 H7C1D1 291 aa12.57□□□□□ -0.4
MSI2-208ENST00000579466 RBM26Q5T8P6 1007 aaKnown RBP12.57□□□□□ -0.4
MSI2-208ENST00000579466 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
MSI2-208ENST00000579466 CELF1Q92879 486 aaKnown RBP12.57□□□□□ -0.4
MSI2-208ENST00000579466 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
MSI2-208ENST00000579466 ZIC5Q96T25 663 aa12.57□□□□□ -0.4
MSI2-208ENST00000579466 CDHR2Q9BYE9 1310 aa12.57□□□□□ -0.4
MSI2-208ENST00000579466 PSMD14O00487 310 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 EGFRP00533 1210 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 MAP2K2P36507 400 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 HUNKP57058 714 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 WASHC4Q2M389 1173 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 CDC37L1Q7L3B6 337 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 SCN9AQ15858 1988 aa12.56□□□□□ -0.4
MSI2-208ENST00000579466 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
MSI2-208ENST00000579466 GPSM2P81274 684 aa12.55□□□□□ -0.4
MSI2-208ENST00000579466 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
MSI2-208ENST00000579466 KCNQ5Q9NR82 932 aa12.55□□□□□ -0.4
MSI2-208ENST00000579466 PGAP2Q9UHJ9 254 aa12.55□□□□□ -0.4
MSI2-208ENST00000579466 SPEF2Q9C093 1822 aa12.54□□□□□ -0.4
MSI2-208ENST00000579466 ECE2O60344 883 aa12.54□□□□□ -0.4
MSI2-208ENST00000579466 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
MSI2-208ENST00000579466 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
MSI2-208ENST00000579466 DGKZQ13574 1117 aa12.54□□□□□ -0.4
MSI2-208ENST00000579466 KRT26Q7Z3Y9 468 aa12.54□□□□□ -0.4
MSI2-208ENST00000579466 PLBD2Q8NHP8 589 aa12.54□□□□□ -0.4
MSI2-208ENST00000579466 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
MSI2-208ENST00000579466 BABAM1Q9NWV8 329 aa12.54□□□□□ -0.4
MSI2-208ENST00000579466 POLLQ9UGP5 575 aa12.54□□□□□ -0.4
MSI2-208ENST00000579466 CHL1O00533 1208 aa12.53□□□□□ -0.4
MSI2-208ENST00000579466 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
MSI2-208ENST00000579466 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
MSI2-208ENST00000579466 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
MSI2-208ENST00000579466 RTL9Q8NET4 1388 aa12.53□□□□□ -0.4
MSI2-208ENST00000579466 AKAP11Q9UKA4 1901 aa12.52□□□□□ -0.4
MSI2-208ENST00000579466 G3V3G9 751 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.41
MSI2-208ENST00000579466 CA12O43570 354 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 NOGQ13253 232 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.41
MSI2-208ENST00000579466 RALBP1Q15311 655 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 DCPSQ96C86 337 aaKnown RBP12.52□□□□□ -0.41
MSI2-208ENST00000579466 HHIPL1Q96JK4 782 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 SEC31BQ9NQW1 1179 aa12.52□□□□□ -0.41
MSI2-208ENST00000579466 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms