RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 GRM8O00222 908 aa12.7□□□□□ -0.38
MKS1-208ENST00000579358 IPO8O15397 1037 aaKnown RBP12.7□□□□□ -0.38
MKS1-208ENST00000579358 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
MKS1-208ENST00000579358 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
MKS1-208ENST00000579358 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
MKS1-208ENST00000579358 UTYO14607 1347 aa12.69□□□□□ -0.38
MKS1-208ENST00000579358 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
MKS1-208ENST00000579358 RASSF7Q02833 373 aa12.69□□□□□ -0.38
MKS1-208ENST00000579358 TTLL11Q8NHH1 800 aa12.69□□□□□ -0.38
MKS1-208ENST00000579358 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
MKS1-208ENST00000579358 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
MKS1-208ENST00000579358 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
MKS1-208ENST00000579358 SLX4Q8IY92 1834 aa12.68□□□□□ -0.38
MKS1-208ENST00000579358 BCAR3O75815 825 aa12.68□□□□□ -0.38
MKS1-208ENST00000579358 LMNB1P20700 586 aa12.68□□□□□ -0.38
MKS1-208ENST00000579358 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
MKS1-208ENST00000579358 PSMD1Q99460 953 aa12.68□□□□□ -0.38
MKS1-208ENST00000579358 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
MKS1-208ENST00000579358 C9orf78Q9NZ63 289 aaPredicted RBP12.68□□□□□ -0.38
MKS1-208ENST00000579358 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
MKS1-208ENST00000579358 ZC3H4Q9UPT8 1303 aaKnown RBP12.67□□□□□ -0.38
MKS1-208ENST00000579358 CSF1RP07333 972 aa12.67□□□□□ -0.38
MKS1-208ENST00000579358 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
MKS1-208ENST00000579358 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
MKS1-208ENST00000579358 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
MKS1-208ENST00000579358 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
MKS1-208ENST00000579358 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
MKS1-208ENST00000579358 UTRNP46939 3433 aa12.66□□□□□ -0.38
MKS1-208ENST00000579358 TRIM27P14373 513 aa12.66□□□□□ -0.38
MKS1-208ENST00000579358 RPS8P62241 208 aaKnown RBP12.66□□□□□ -0.38
MKS1-208ENST00000579358 ZKSCAN2Q63HK3 967 aa12.66□□□□□ -0.38
MKS1-208ENST00000579358 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
MKS1-208ENST00000579358 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
MKS1-208ENST00000579358 SEC31BQ9NQW1 1179 aa12.66□□□□□ -0.38
MKS1-208ENST00000579358 RNF181Q9P0P0 153 aa12.66□□□□□ -0.38
MKS1-208ENST00000579358 NBPF7P0C2Y1 421 aaPredicted RBP12.65□□□□□ -0.38
MKS1-208ENST00000579358 PRELPP51888 382 aa12.65□□□□□ -0.38
MKS1-208ENST00000579358 FOXO4P98177 505 aa12.65□□□□□ -0.38
MKS1-208ENST00000579358 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
MKS1-208ENST00000579358 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
MKS1-208ENST00000579358 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
MKS1-208ENST00000579358 GREM2Q9H772 168 aa12.65□□□□□ -0.38
MKS1-208ENST00000579358 ITGA6P23229 1130 aa12.64□□□□□ -0.39
MKS1-208ENST00000579358 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
MKS1-208ENST00000579358 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
MKS1-208ENST00000579358 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
MKS1-208ENST00000579358 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
MKS1-208ENST00000579358 RTFDC1Q9BY42 306 aaPredicted RBP12.64□□□□□ -0.39
MKS1-208ENST00000579358 VPS33BQ9H267 617 aa12.64□□□□□ -0.39
MKS1-208ENST00000579358 FER1L6Q2WGJ9 1857 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 CHD4Q14839 1912 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
MKS1-208ENST00000579358 RABL6Q3YEC7 729 aaPredicted RBP12.63□□□□□ -0.39
MKS1-208ENST00000579358 EPHA10Q5JZY3 1008 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 LMBR1LQ6UX01 489 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
MKS1-208ENST00000579358 SLC51AQ86UW1 340 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 MPNDQ8N594 471 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 KAZALD1Q96I82 304 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
MKS1-208ENST00000579358 RCAN3Q9UKA8 241 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 COL4A1P02462 1669 aa12.63□□□□□ -0.39
MKS1-208ENST00000579358 LRRC37AA6NMS7 1700 aa12.62□□□□□ -0.39
MKS1-208ENST00000579358 ANKRD18BA2A2Z9 1011 aa12.62□□□□□ -0.39
MKS1-208ENST00000579358 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
MKS1-208ENST00000579358 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
MKS1-208ENST00000579358 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
MKS1-208ENST00000579358 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
MKS1-208ENST00000579358 PODXL2Q9NZ53 605 aa12.62□□□□□ -0.39
MKS1-208ENST00000579358 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
MKS1-208ENST00000579358 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
MKS1-208ENST00000579358 CCDC57Q2TAC2 916 aa12.61□□□□□ -0.39
MKS1-208ENST00000579358 FTSJ3Q8IY81 847 aaKnown RBP12.61□□□□□ -0.39
MKS1-208ENST00000579358 DZIP1LQ8IYY4 767 aaKnown RBP12.61□□□□□ -0.39
MKS1-208ENST00000579358 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
MKS1-208ENST00000579358 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
MKS1-208ENST00000579358 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
MKS1-208ENST00000579358 TNNQ9UQP3 1299 aa12.61□□□□□ -0.39
MKS1-208ENST00000579358 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
MKS1-208ENST00000579358 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
MKS1-208ENST00000579358 GNAI3P08754 354 aa12.6□□□□□ -0.39
MKS1-208ENST00000579358 GPSM2P81274 684 aa12.6□□□□□ -0.39
MKS1-208ENST00000579358 TMEM57Q8N5G2 664 aa12.6□□□□□ -0.39
MKS1-208ENST00000579358 ANKRD44Q8N8A2 993 aa12.6□□□□□ -0.39
MKS1-208ENST00000579358 MPHOSPH8Q99549 860 aa12.6□□□□□ -0.39
MKS1-208ENST00000579358 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
MKS1-208ENST00000579358 XDHP47989 1333 aa12.6□□□□□ -0.39
MKS1-208ENST00000579358 PPIP5K2O43314 1243 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 MS4A1P11836 297 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 KIAA2012Q0VF49 1180 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 EYA3Q99504 573 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 MEIS3Q99687 375 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 MINPP1Q9UNW1 487 aa12.59□□□□□ -0.39
MKS1-208ENST00000579358 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 FZD9O00144 591 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 ATP2B4P23634 1241 aa12.58□□□□□ -0.4
MKS1-208ENST00000579358 AOC3Q16853 763 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms