RNA–Protein interactions for RNA: ENST00000579243.1

USH1G-201, Transcript of USH1 protein network component sans, humanhuman

TSL 2

Gene USH1G, Length 1,673 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-201ENST00000579243 DDX60Q8IY21 1712 aaKnown RBP25.3■■□□□ 1.64
USH1G-201ENST00000579243 SSH1Q8WYL5 1049 aa25.29■■□□□ 1.64
USH1G-201ENST00000579243 LAMB2P55268 1798 aa25.29■■□□□ 1.64
USH1G-201ENST00000579243 PPEF1O14829 653 aaPredicted RBP25.29■■□□□ 1.64
USH1G-201ENST00000579243 CC2D2BQ6DHV5 1058 aa25.29■■□□□ 1.64
USH1G-201ENST00000579243 LINS1Q8NG48 757 aa25.29■■□□□ 1.64
USH1G-201ENST00000579243 CCDC136Q96JN2 1154 aa25.29■■□□□ 1.64
USH1G-201ENST00000579243 BBOX1O75936 387 aa25.28■■□□□ 1.64
USH1G-201ENST00000579243 CDHR2Q9BYE9 1310 aa25.28■■□□□ 1.64
USH1G-201ENST00000579243 FKBP4Q02790 459 aaKnown RBP eCLIP25.27■■□□□ 1.64
USH1G-201ENST00000579243 GRAPQ13588 217 aa25.27■■□□□ 1.64
USH1G-201ENST00000579243 GCKRQ14397 625 aa25.27■■□□□ 1.64
USH1G-201ENST00000579243 GRAPLQ8TC17 118 aaPredicted RBP25.27■■□□□ 1.64
USH1G-201ENST00000579243 H7C1W4 665 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 PDE8AO60658 829 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 ALDH1L2Q3SY69 923 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 BEND3Q5T5X7 828 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 SLC51AQ86UW1 340 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 ZNF526Q8TF50 670 aaPredicted RBP25.26■■□□□ 1.63
USH1G-201ENST00000579243 SNED1Q8TER0 1413 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 PDE3AQ14432 1141 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 GPBP1L1Q9HC44 474 aaPredicted RBP25.26■■□□□ 1.63
USH1G-201ENST00000579243 ATP6V0A2Q9Y487 856 aa25.26■■□□□ 1.63
USH1G-201ENST00000579243 GRIPAP1Q4V328 841 aa25.25■■□□□ 1.63
USH1G-201ENST00000579243 PSMD1Q99460 953 aa25.24■■□□□ 1.63
USH1G-201ENST00000579243 BCL2L13Q9BXK5 485 aa25.24■■□□□ 1.63
USH1G-201ENST00000579243 ZC3H4Q9UPT8 1303 aaKnown RBP25.24■■□□□ 1.63
USH1G-201ENST00000579243 UBE3BQ7Z3V4 1068 aa25.23■■□□□ 1.63
USH1G-201ENST00000579243 SP8Q8IXZ3 490 aa25.23■■□□□ 1.63
USH1G-201ENST00000579243 CCDC88AQ3V6T2 1871 aa25.23■■□□□ 1.63
USH1G-201ENST00000579243 CELF1Q92879 486 aaKnown RBP25.23■■□□□ 1.63
USH1G-201ENST00000579243 TMX4Q9H1E5 349 aaPredicted RBP25.23■■□□□ 1.63
USH1G-201ENST00000579243 ZNF277Q9NRM2 450 aaPredicted RBP25.23■■□□□ 1.63
USH1G-201ENST00000579243 SMC4Q9NTJ3 1288 aa25.23■■□□□ 1.63
USH1G-201ENST00000579243 FRAT1Q92837 279 aaPredicted RBP25.22■■□□□ 1.63
USH1G-201ENST00000579243 PTPRCP08575 1304 aa25.21■■□□□ 1.63
USH1G-201ENST00000579243 CASP7P55210 303 aa25.21■■□□□ 1.63
USH1G-201ENST00000579243 CCDC152Q4G0S7 254 aa25.21■■□□□ 1.63
USH1G-201ENST00000579243 TMC4Q7Z404 712 aa25.21■■□□□ 1.63
USH1G-201ENST00000579243 SLC4A10Q6U841 1118 aa25.2■■□□□ 1.63
USH1G-201ENST00000579243 SEC31BQ9NQW1 1179 aa25.2■■□□□ 1.63
USH1G-201ENST00000579243 CTSWP56202 376 aa25.2■■□□□ 1.62
USH1G-201ENST00000579243 TAF1P21675 1872 aa25.19■■□□□ 1.62
USH1G-201ENST00000579243 KIF16BQ96L93 1317 aa25.19■■□□□ 1.62
USH1G-201ENST00000579243 RPS8P62241 208 aaKnown RBP25.19■■□□□ 1.62
USH1G-201ENST00000579243 TTLL11Q8NHH1 800 aa25.19■■□□□ 1.62
USH1G-201ENST00000579243 CCDC85AQ96PX6 553 aaPredicted RBP25.19■■□□□ 1.62
USH1G-201ENST00000579243 PLA2G12BQ9BX93 195 aa25.19■■□□□ 1.62
USH1G-201ENST00000579243 ALDH1L1O75891 902 aa25.18■■□□□ 1.62
USH1G-201ENST00000579243 IARSP41252 1262 aaKnown RBP25.18■■□□□ 1.62
USH1G-201ENST00000579243 SRCIN1Q9C0H9 1055 aa25.18■■□□□ 1.62
USH1G-201ENST00000579243 BRPF1P55201 1214 aaPredicted RBP25.17■■□□□ 1.62
USH1G-201ENST00000579243 ZKSCAN2Q63HK3 967 aa25.17■■□□□ 1.62
USH1G-201ENST00000579243 DICER1Q9UPY3 1922 aaKnown RBP25.17■■□□□ 1.62
USH1G-201ENST00000579243 KDM2BQ8NHM5 1336 aa25.17■■□□□ 1.62
USH1G-201ENST00000579243 GLTPD2A6NH11 291 aa25.17■■□□□ 1.62
USH1G-201ENST00000579243 COL4A1P02462 1669 aa25.16■■□□□ 1.62
USH1G-201ENST00000579243 MPNDQ8N594 471 aa25.16■■□□□ 1.62
USH1G-201ENST00000579243 RTFDC1Q9BY42 306 aaPredicted RBP25.16■■□□□ 1.62
USH1G-201ENST00000579243 DPP8Q6V1X1 898 aaPredicted RBP25.15■■□□□ 1.62
USH1G-201ENST00000579243 TIAM2Q8IVF5 1701 aa25.14■■□□□ 1.62
USH1G-201ENST00000579243 GRM8O00222 908 aa25.14■■□□□ 1.62
USH1G-201ENST00000579243 DPY19L2Q6NUT2 758 aa25.14■■□□□ 1.62
USH1G-201ENST00000579243 PANK1Q8TE04 598 aa25.14■■□□□ 1.62
USH1G-201ENST00000579243 GREM2Q9H772 168 aa25.14■■□□□ 1.62
USH1G-201ENST00000579243 NMRK2Q9NPI5 230 aa25.14■■□□□ 1.62
USH1G-201ENST00000579243 KIF3CO14782 793 aa25.13■■□□□ 1.61
USH1G-201ENST00000579243 CSF1RP07333 972 aa25.13■■□□□ 1.61
USH1G-201ENST00000579243 MS4A1P11836 297 aa25.13■■□□□ 1.61
USH1G-201ENST00000579243 C9orf78Q9NZ63 289 aaPredicted RBP25.13■■□□□ 1.61
USH1G-201ENST00000579243 NOB1Q9ULX3 412 aaKnown RBP25.13■■□□□ 1.61
USH1G-201ENST00000579243 SUPT20HQ8NEM7 779 aa25.13■■□□□ 1.61
USH1G-201ENST00000579243 VPS33BQ9H267 617 aa25.13■■□□□ 1.61
USH1G-201ENST00000579243 RTL9Q8NET4 1388 aa25.12■■□□□ 1.61
USH1G-201ENST00000579243 ANKRD18AQ8IVF6 992 aa25.11■■□□□ 1.61
USH1G-201ENST00000579243 JDP2Q8WYK2 163 aa25.11■■□□□ 1.61
USH1G-201ENST00000579243 CDC5LQ99459 802 aaKnown RBP25.11■■□□□ 1.61
USH1G-201ENST00000579243 RRAGCQ9HB90 399 aa25.11■■□□□ 1.61
USH1G-201ENST00000579243 TNNQ9UQP3 1299 aa25.11■■□□□ 1.61
USH1G-201ENST00000579243 COG6Q9Y2V7 657 aa25.11■■□□□ 1.61
USH1G-201ENST00000579243 RLBP1P12271 317 aa25.1■■□□□ 1.61
USH1G-201ENST00000579243 FOXO4P98177 505 aa25.1■■□□□ 1.61
USH1G-201ENST00000579243 LARGE2Q8N3Y3 721 aa25.1■■□□□ 1.61
USH1G-201ENST00000579243 NSFL1CQ9UNZ2 370 aaKnown RBP25.1■■□□□ 1.61
USH1G-201ENST00000579243 MYH3P11055 1940 aa25.1■■□□□ 1.61
USH1G-201ENST00000579243 FZD9O00144 591 aa25.1■■□□□ 1.61
USH1G-201ENST00000579243 GPSM2P81274 684 aa25.1■■□□□ 1.61
USH1G-201ENST00000579243 ATF7IPQ6VMQ6 1270 aa25.1■■□□□ 1.61
USH1G-201ENST00000579243 LRRC37AA6NMS7 1700 aa25.09■■□□□ 1.61
USH1G-201ENST00000579243 IPO8O15397 1037 aaKnown RBP25.09■■□□□ 1.61
USH1G-201ENST00000579243 PPIP5K2O43314 1243 aa25.09■■□□□ 1.61
USH1G-201ENST00000579243 TRIM27P14373 513 aa25.09■■□□□ 1.61
USH1G-201ENST00000579243 AOC3Q16853 763 aa25.09■■□□□ 1.61
USH1G-201ENST00000579243 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
USH1G-201ENST00000579243 DZIP1LQ8IYY4 767 aaKnown RBP25.09■■□□□ 1.61
USH1G-201ENST00000579243 DDNO94850 711 aaPredicted RBP25.08■■□□□ 1.61
USH1G-201ENST00000579243 UTYO14607 1347 aa25.08■■□□□ 1.61
USH1G-201ENST00000579243 COL4A5P29400 1685 aa25.08■■□□□ 1.6
USH1G-201ENST00000579243 NBPF7P0C2Y1 421 aaPredicted RBP25.07■■□□□ 1.6
USH1G-201ENST00000579243 ITGA6P23229 1130 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms